Vulpes vulpes papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Treisetapapillomavirus; Treisetapapillomavirus 1

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7BW90|A0A0A7BW90_9PAPI Replication protein E1 OS=Vulpes vulpes papillomavirus 1 OX=1163709 GN=E1 PE=3 SV=1
MM1 pKa = 7.68LPRR4 pKa = 11.84KK5 pKa = 9.11RR6 pKa = 11.84AKK8 pKa = 10.22RR9 pKa = 11.84DD10 pKa = 3.49TVDD13 pKa = 3.08NLYY16 pKa = 10.09RR17 pKa = 11.84QCQITGNCPPDD28 pKa = 3.46VKK30 pKa = 11.11NKK32 pKa = 10.12VEE34 pKa = 4.18GTTLADD40 pKa = 3.12ILSKK44 pKa = 10.38IFSSIIYY51 pKa = 9.31TGGLGIGTGKK61 pKa = 8.8GTGGTGGYY69 pKa = 9.4RR70 pKa = 11.84PLGGTTGSRR79 pKa = 11.84GPGTVSRR86 pKa = 11.84PNIPVDD92 pKa = 4.07PIGPADD98 pKa = 3.96ILPINPVEE106 pKa = 4.31PNASSIVPLNEE117 pKa = 3.96GDD119 pKa = 3.41PGIIIEE125 pKa = 4.79PPGTVNGADD134 pKa = 3.38VEE136 pKa = 4.48LSVVTSIDD144 pKa = 3.47PVSDD148 pKa = 3.41VSNASIPAPTGAGSDD163 pKa = 3.38GDD165 pKa = 3.9AAIIDD170 pKa = 4.18VQTSTRR176 pKa = 11.84TTNAVRR182 pKa = 11.84STQRR186 pKa = 11.84FNNPVFEE193 pKa = 4.48TVAIVHH199 pKa = 6.5RR200 pKa = 11.84SFGEE204 pKa = 3.83SSEE207 pKa = 3.99NLNVVVDD214 pKa = 3.98PTILQDD220 pKa = 3.54TVIGGDD226 pKa = 2.9EE227 pKa = 4.45GEE229 pKa = 4.65FIEE232 pKa = 5.87LDD234 pKa = 3.05ILGRR238 pKa = 11.84PSQFEE243 pKa = 3.99IVEE246 pKa = 4.21GEE248 pKa = 4.31GPKK251 pKa = 10.0TSTPIEE257 pKa = 4.1RR258 pKa = 11.84LAGPFKK264 pKa = 10.65RR265 pKa = 11.84ARR267 pKa = 11.84EE268 pKa = 4.02LYY270 pKa = 9.81NRR272 pKa = 11.84RR273 pKa = 11.84IKK275 pKa = 10.19QIPTQNPLFLGRR287 pKa = 11.84AAEE290 pKa = 3.88AVEE293 pKa = 5.0FGFEE297 pKa = 3.82NPAYY301 pKa = 9.66EE302 pKa = 5.23DD303 pKa = 4.49DD304 pKa = 3.79VTLTFEE310 pKa = 4.96RR311 pKa = 11.84DD312 pKa = 3.37LDD314 pKa = 3.89EE315 pKa = 5.1LAAAPVAAPDD325 pKa = 4.17PDD327 pKa = 3.58FADD330 pKa = 3.07IVKK333 pKa = 10.59LSRR336 pKa = 11.84PRR338 pKa = 11.84LSEE341 pKa = 3.97PEE343 pKa = 4.02PGRR346 pKa = 11.84VRR348 pKa = 11.84YY349 pKa = 9.75SRR351 pKa = 11.84LGRR354 pKa = 11.84RR355 pKa = 11.84GTMTLRR361 pKa = 11.84SGVQIGEE368 pKa = 4.05EE369 pKa = 3.92VHH371 pKa = 7.03FYY373 pKa = 11.04RR374 pKa = 11.84DD375 pKa = 3.26LSTIDD380 pKa = 3.55DD381 pKa = 3.9AQGIEE386 pKa = 4.3LSVLGHH392 pKa = 5.33QSGEE396 pKa = 4.07EE397 pKa = 4.1VIIDD401 pKa = 3.99PLSEE405 pKa = 4.12STVIDD410 pKa = 3.66AEE412 pKa = 4.58NISEE416 pKa = 4.14PQFDD420 pKa = 3.86YY421 pKa = 11.5DD422 pKa = 3.86EE423 pKa = 4.91YY424 pKa = 11.46EE425 pKa = 4.14HH426 pKa = 7.12LLLDD430 pKa = 4.13EE431 pKa = 4.78LSEE434 pKa = 4.61DD435 pKa = 3.91FSNSHH440 pKa = 6.54LVLNSTGRR448 pKa = 11.84NSSLTMPSMPPGTPLKK464 pKa = 10.61IFIDD468 pKa = 4.46DD469 pKa = 3.82YY470 pKa = 11.47GSLIVAHH477 pKa = 6.51SSSTEE482 pKa = 3.73SDD484 pKa = 4.7DD485 pKa = 3.62IPSTIWEE492 pKa = 4.23NLQPVIVVSPFEE504 pKa = 4.07SFDD507 pKa = 4.0YY508 pKa = 10.75NLHH511 pKa = 6.08PSLRR515 pKa = 11.84RR516 pKa = 11.84KK517 pKa = 8.88KK518 pKa = 10.06RR519 pKa = 11.84KK520 pKa = 9.24RR521 pKa = 11.84PYY523 pKa = 10.36FFF525 pKa = 5.75

Molecular weight: 56.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7BWG9|A0A0A7BWG9_9PAPI Regulatory protein E2 OS=Vulpes vulpes papillomavirus 1 OX=1163709 GN=E2 PE=3 SV=1
MM1 pKa = 6.59EE2 pKa = 4.56TLRR5 pKa = 11.84EE6 pKa = 3.97RR7 pKa = 11.84FDD9 pKa = 3.9ALQEE13 pKa = 4.04QLLTLYY19 pKa = 10.08EE20 pKa = 4.08QEE22 pKa = 4.45NNDD25 pKa = 4.37LEE27 pKa = 4.55SQLLHH32 pKa = 6.44WKK34 pKa = 9.31LQRR37 pKa = 11.84KK38 pKa = 8.55EE39 pKa = 4.06SALMYY44 pKa = 9.03YY45 pKa = 10.1ARR47 pKa = 11.84KK48 pKa = 10.0NGLASLGMQRR58 pKa = 11.84LPSLQVSEE66 pKa = 4.43QQAKK70 pKa = 8.76QAILMTLYY78 pKa = 10.9LEE80 pKa = 4.79SLSKK84 pKa = 9.62TPYY87 pKa = 10.61AKK89 pKa = 10.35EE90 pKa = 3.4HH91 pKa = 5.88WTLQDD96 pKa = 2.91TSYY99 pKa = 10.92EE100 pKa = 4.08RR101 pKa = 11.84FMGQPPYY108 pKa = 10.38CFKK111 pKa = 10.87KK112 pKa = 10.75GPFTVDD118 pKa = 2.65VVYY121 pKa = 11.04DD122 pKa = 3.65KK123 pKa = 11.34DD124 pKa = 4.09SNNMFSYY131 pKa = 10.54TNYY134 pKa = 10.53NFIYY138 pKa = 10.48YY139 pKa = 9.66QDD141 pKa = 4.09EE142 pKa = 4.32DD143 pKa = 4.57EE144 pKa = 4.69NWHH147 pKa = 5.59KK148 pKa = 9.81TSGEE152 pKa = 3.83VSYY155 pKa = 11.18EE156 pKa = 3.48GLYY159 pKa = 8.53YY160 pKa = 10.21TDD162 pKa = 3.29YY163 pKa = 10.75KK164 pKa = 10.57GRR166 pKa = 11.84SVYY169 pKa = 10.0FVYY172 pKa = 10.64FEE174 pKa = 5.24KK175 pKa = 10.78DD176 pKa = 2.97AQLYY180 pKa = 8.39SQYY183 pKa = 9.82GTWEE187 pKa = 3.9VHH189 pKa = 6.57FKK191 pKa = 10.72NQTISASVVSTSTGTGSGAYY211 pKa = 9.26DD212 pKa = 4.1SPDD215 pKa = 3.02SSPPGRR221 pKa = 11.84RR222 pKa = 11.84STGRR226 pKa = 11.84PRR228 pKa = 11.84VSEE231 pKa = 3.84ARR233 pKa = 11.84QPANTSPTAYY243 pKa = 9.64PEE245 pKa = 4.36ASEE248 pKa = 4.0KK249 pKa = 9.53TALRR253 pKa = 11.84KK254 pKa = 9.84RR255 pKa = 11.84PGPGPGQTSPSPSAGAPKK273 pKa = 9.91RR274 pKa = 11.84RR275 pKa = 11.84RR276 pKa = 11.84RR277 pKa = 11.84GEE279 pKa = 3.81RR280 pKa = 11.84EE281 pKa = 3.55QVPRR285 pKa = 11.84QLRR288 pKa = 11.84STPSVSSGTPWPSPGQVGRR307 pKa = 11.84RR308 pKa = 11.84SRR310 pKa = 11.84LPPRR314 pKa = 11.84HH315 pKa = 5.56NSSRR319 pKa = 11.84LRR321 pKa = 11.84RR322 pKa = 11.84LQAEE326 pKa = 3.99AWDD329 pKa = 4.1PPVILLKK336 pKa = 11.05GKK338 pKa = 10.35ANNLKK343 pKa = 9.99CWRR346 pKa = 11.84NRR348 pKa = 11.84VKK350 pKa = 10.51QRR352 pKa = 11.84NLDD355 pKa = 3.67FKK357 pKa = 10.95IVFSSLFNWIGLSHH371 pKa = 6.55TEE373 pKa = 3.98HH374 pKa = 6.64GKK376 pKa = 9.56HH377 pKa = 6.23RR378 pKa = 11.84MLLAFDD384 pKa = 4.21GEE386 pKa = 4.33KK387 pKa = 10.39EE388 pKa = 3.8RR389 pKa = 11.84RR390 pKa = 11.84LFLDD394 pKa = 3.48TVKK397 pKa = 10.63LPKK400 pKa = 10.51GVTYY404 pKa = 10.95SLGNLDD410 pKa = 3.96SLL412 pKa = 4.83

Molecular weight: 47.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2303

96

623

383.8

42.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.037 ± 0.387

2.084 ± 0.739

6.036 ± 0.548

6.34 ± 0.335

4.516 ± 0.354

6.687 ± 0.684

1.693 ± 0.237

4.342 ± 0.864

5.211 ± 0.762

9.857 ± 0.835

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.563 ± 0.295

4.907 ± 0.562

6.426 ± 0.743

3.995 ± 0.503

5.775 ± 0.844

8.641 ± 0.61

6.296 ± 0.381

6.166 ± 0.45

1.259 ± 0.308

3.17 ± 0.536
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski