Papillomaviridae sp.

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae

Average proteome isoelectric point is 7.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A345N151|A0A345N151_9PAPI Protein E8^E2C OS=Papillomaviridae sp. OX=2052558 PE=3 SV=1
MM1 pKa = 7.48EE2 pKa = 6.46FIDD5 pKa = 4.97TMAEE9 pKa = 4.06CSDD12 pKa = 3.66SGGEE16 pKa = 4.06EE17 pKa = 4.01EE18 pKa = 5.22QEE20 pKa = 4.17VLTVEE25 pKa = 4.48DD26 pKa = 4.72EE27 pKa = 4.46SFIDD31 pKa = 3.29NTQYY35 pKa = 11.1CEE37 pKa = 4.05SPPRR41 pKa = 11.84KK42 pKa = 9.32LLKK45 pKa = 10.0QLCEE49 pKa = 4.14SLEE52 pKa = 4.04KK53 pKa = 10.85SSLEE57 pKa = 3.96KK58 pKa = 10.56KK59 pKa = 8.28YY60 pKa = 11.26AKK62 pKa = 10.0YY63 pKa = 9.95DD64 pKa = 3.47QPGPSVSKK72 pKa = 10.31RR73 pKa = 11.84VLFPEE78 pKa = 4.02RR79 pKa = 11.84HH80 pKa = 5.71VEE82 pKa = 4.1TQEE85 pKa = 3.82DD86 pKa = 4.2SGMLTYY92 pKa = 10.9DD93 pKa = 3.98EE94 pKa = 5.72LSMRR98 pKa = 11.84DD99 pKa = 3.15NYY101 pKa = 10.59EE102 pKa = 3.41INEE105 pKa = 4.17LVNTEE110 pKa = 4.19TLFEE114 pKa = 4.39EE115 pKa = 4.87EE116 pKa = 4.62FIAPVVEE123 pKa = 4.38VQGTLSAQTLEE134 pKa = 4.16QKK136 pKa = 10.65LRR138 pKa = 11.84TSYY141 pKa = 11.13YY142 pKa = 9.36HH143 pKa = 5.75FTAASSPDD151 pKa = 3.58KK152 pKa = 11.03IGVRR156 pKa = 11.84WNDD159 pKa = 2.86VHH161 pKa = 8.97KK162 pKa = 10.87GMKK165 pKa = 9.64SPKK168 pKa = 8.57TMQKK172 pKa = 7.97IWSIFVEE179 pKa = 4.42RR180 pKa = 11.84PVEE183 pKa = 3.98VRR185 pKa = 11.84RR186 pKa = 11.84NHH188 pKa = 6.01PNCGKK193 pKa = 10.13RR194 pKa = 11.84SHH196 pKa = 6.65VPLEE200 pKa = 4.01ALLCNDD206 pKa = 3.66AALLRR211 pKa = 11.84ASSTPHH217 pKa = 5.44HH218 pKa = 6.82VYY220 pKa = 10.89YY221 pKa = 10.83LLEE224 pKa = 4.32YY225 pKa = 9.83TDD227 pKa = 3.71SQRR230 pKa = 11.84SIKK233 pKa = 10.35GLQKK237 pKa = 10.47LLKK240 pKa = 10.26AVGIEE245 pKa = 3.87HH246 pKa = 7.15CLFGVPYY253 pKa = 10.09FKK255 pKa = 10.77QPLTRR260 pKa = 11.84TFLRR264 pKa = 11.84DD265 pKa = 2.96STTPLDD271 pKa = 3.78VKK273 pKa = 10.77RR274 pKa = 11.84DD275 pKa = 3.61VSFLADD281 pKa = 3.76IEE283 pKa = 4.23DD284 pKa = 3.46EE285 pKa = 4.51KK286 pKa = 11.39YY287 pKa = 10.5IKK289 pKa = 10.11QSYY292 pKa = 7.75QFNMEE297 pKa = 4.11EE298 pKa = 4.21LISYY302 pKa = 9.84CEE304 pKa = 3.94SSEE307 pKa = 4.24PEE309 pKa = 4.08TVQQLIYY316 pKa = 10.39RR317 pKa = 11.84YY318 pKa = 7.93TSEE321 pKa = 4.97AKK323 pKa = 10.48HH324 pKa = 6.12GDD326 pKa = 3.41PNAIAWRR333 pKa = 11.84NTTSCMNHH341 pKa = 6.13AKK343 pKa = 10.29NAFSMWKK350 pKa = 8.26STVQGEE356 pKa = 4.27MLDD359 pKa = 4.4LSLSDD364 pKa = 4.6YY365 pKa = 10.18ILHH368 pKa = 7.07RR369 pKa = 11.84ISEE372 pKa = 4.37NEE374 pKa = 3.81GGDD377 pKa = 3.38AAKK380 pKa = 10.3VRR382 pKa = 11.84RR383 pKa = 11.84LFTIQGILEE392 pKa = 3.99IDD394 pKa = 3.96FLNTLRR400 pKa = 11.84KK401 pKa = 8.98WLVGQHH407 pKa = 6.03KK408 pKa = 10.27YY409 pKa = 10.76NVIVLVGPGNTGKK422 pKa = 10.64SLFTEE427 pKa = 4.51ALMKK431 pKa = 10.74CLGGAFLSWHH441 pKa = 7.25KK442 pKa = 11.01DD443 pKa = 3.12NQYY446 pKa = 9.46WKK448 pKa = 10.85SPILGSRR455 pKa = 11.84FCCIDD460 pKa = 4.94DD461 pKa = 3.45ITLAGWKK468 pKa = 10.12NLDD471 pKa = 3.33EE472 pKa = 4.62CEE474 pKa = 4.26RR475 pKa = 11.84RR476 pKa = 11.84ALDD479 pKa = 3.79GGIVTINKK487 pKa = 9.43KK488 pKa = 8.32FTQPTEE494 pKa = 4.18VKK496 pKa = 10.39FPPCLITTNTILTDD510 pKa = 3.46ADD512 pKa = 4.29FSFLKK517 pKa = 10.6NRR519 pKa = 11.84LVWYY523 pKa = 8.33TFDD526 pKa = 3.44KK527 pKa = 11.3VLVTRR532 pKa = 11.84DD533 pKa = 3.52GLAEE537 pKa = 4.13AAVSTADD544 pKa = 3.37CAAWLLLNRR553 pKa = 11.84NTLDD557 pKa = 3.33LL558 pKa = 4.63

Molecular weight: 63.76 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A345N148|A0A345N148_9PAPI L2 protein OS=Papillomaviridae sp. OX=2052558 PE=4 SV=1
MM1 pKa = 7.4VNGKK5 pKa = 7.98QEE7 pKa = 3.81QMDD10 pKa = 3.55IGVLLICLMDD20 pKa = 4.4LFQHH24 pKa = 6.02SLRR27 pKa = 11.84LKK29 pKa = 10.35QVIQMQPLISITDD42 pKa = 3.63SLILSNRR49 pKa = 11.84GLVLHH54 pKa = 6.55HH55 pKa = 6.31HH56 pKa = 5.46QKK58 pKa = 10.53SRR60 pKa = 11.84LEE62 pKa = 4.12VIIIFHH68 pKa = 6.04LTLYY72 pKa = 10.4IILIRR77 pKa = 11.84NMYY80 pKa = 8.11ITRR83 pKa = 11.84KK84 pKa = 8.79YY85 pKa = 9.81RR86 pKa = 11.84RR87 pKa = 11.84NVKK90 pKa = 9.11NAKK93 pKa = 9.21ARR95 pKa = 11.84NVLSMMCNYY104 pKa = 9.98SVSRR108 pKa = 11.84TYY110 pKa = 10.72SSGVRR115 pKa = 11.84VHH117 pKa = 7.03RR118 pKa = 11.84GWCTYY123 pKa = 10.46

Molecular weight: 14.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1936

123

558

387.2

43.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.888 ± 0.574

1.498 ± 0.418

6.043 ± 0.689

6.508 ± 0.602

3.874 ± 0.233

6.198 ± 0.53

3.099 ± 0.458

5.63 ± 0.506

7.128 ± 1.11

8.523 ± 1.133

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.963 ± 0.502

4.029 ± 0.353

6.612 ± 1.7

3.306 ± 0.497

5.837 ± 0.74

6.56 ± 0.575

6.508 ± 0.246

6.043 ± 0.294

1.343 ± 0.177

3.409 ± 0.299
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski