Avian metaavulavirus 5

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 6.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D3X605|D3X605_9MONO Isoform of D3X603 W protein OS=Avian metaavulavirus 5 OX=2560315 GN=P PE=4 SV=1
MM1 pKa = 8.41DD2 pKa = 3.94ITDD5 pKa = 4.13DD6 pKa = 4.33QAILDD11 pKa = 4.9LLTLSNDD18 pKa = 3.38VIEE21 pKa = 5.2SIQHH25 pKa = 5.86AEE27 pKa = 4.29SAGSQPPTYY36 pKa = 10.47GRR38 pKa = 11.84STIPKK43 pKa = 7.35GTTMALTQAWEE54 pKa = 4.24AEE56 pKa = 4.5SNPTQPQPSISPSQLDD72 pKa = 4.19HH73 pKa = 7.13IRR75 pKa = 11.84VDD77 pKa = 3.25QDD79 pKa = 3.6SNKK82 pKa = 9.89NHH84 pKa = 7.36DD85 pKa = 3.78NLKK88 pKa = 9.73NQFDD92 pKa = 4.3SHH94 pKa = 6.21HH95 pKa = 6.46HH96 pKa = 5.82TSQDD100 pKa = 3.6SEE102 pKa = 4.47THH104 pKa = 6.36PNIQVNPSVNRR115 pKa = 11.84TNEE118 pKa = 3.69EE119 pKa = 4.21DD120 pKa = 3.38NSKK123 pKa = 10.42LVQQRR128 pKa = 11.84DD129 pKa = 3.4PSTTWEE135 pKa = 4.53GGSMLDD141 pKa = 4.4RR142 pKa = 11.84EE143 pKa = 4.4LDD145 pKa = 4.25AIQSKK150 pKa = 10.03IKK152 pKa = 10.24RR153 pKa = 11.84GKK155 pKa = 4.42TTKK158 pKa = 10.11SAHH161 pKa = 5.58QPSHH165 pKa = 5.93TATHH169 pKa = 5.9QSPNNLDD176 pKa = 4.28DD177 pKa = 5.61DD178 pKa = 4.3IKK180 pKa = 11.25KK181 pKa = 10.61GGPDD185 pKa = 3.22LRR187 pKa = 6.06

Molecular weight: 20.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D3X607|D3X607_9MONO Fusion glycoprotein F0 OS=Avian metaavulavirus 5 OX=2560315 GN=F PE=3 SV=1
MM1 pKa = 7.5AQTQLKK7 pKa = 10.42LYY9 pKa = 10.56VNDD12 pKa = 4.07GDD14 pKa = 3.83PSNRR18 pKa = 11.84LLAFPIVMKK27 pKa = 10.67EE28 pKa = 3.8SAQGGKK34 pKa = 9.32VLQPQLRR41 pKa = 11.84ISYY44 pKa = 10.09LGDD47 pKa = 4.42AIGGRR52 pKa = 11.84NSVIFINCYY61 pKa = 10.47GFIEE65 pKa = 4.45SMKK68 pKa = 10.51AGEE71 pKa = 4.93GPFLDD76 pKa = 4.09VNSDD80 pKa = 3.35GKK82 pKa = 11.53GEE84 pKa = 4.29VITAAGLTLGSVTYY98 pKa = 10.66DD99 pKa = 3.2SDD101 pKa = 3.41PTEE104 pKa = 4.21IARR107 pKa = 11.84SCYY110 pKa = 9.83QLLVTVKK117 pKa = 9.94KK118 pKa = 10.79SADD121 pKa = 3.16NTEE124 pKa = 3.97RR125 pKa = 11.84VVYY128 pKa = 8.99TLASKK133 pKa = 10.6PPALSSSRR141 pKa = 11.84VVTSGGCILSAEE153 pKa = 4.41EE154 pKa = 4.56AVKK157 pKa = 10.72CPSKK161 pKa = 10.42LQSGIPYY168 pKa = 9.25KK169 pKa = 10.46FRR171 pKa = 11.84IMFVSLTYY179 pKa = 10.14IHH181 pKa = 6.69QSTLYY186 pKa = 10.21RR187 pKa = 11.84VNNLIAKK194 pKa = 8.94LRR196 pKa = 11.84SPVFISVQLQVTLILDD212 pKa = 4.13LPEE215 pKa = 3.91KK216 pKa = 10.65HH217 pKa = 6.83PMGKK221 pKa = 9.87YY222 pKa = 10.55LINQDD227 pKa = 3.45GVYY230 pKa = 9.88KK231 pKa = 10.47AHH233 pKa = 6.61IWMHH237 pKa = 5.35ICNFKK242 pKa = 9.0KK243 pKa = 9.32TNRR246 pKa = 11.84KK247 pKa = 8.76GADD250 pKa = 2.98RR251 pKa = 11.84SVLQIKK257 pKa = 9.92EE258 pKa = 4.31KK259 pKa = 8.93VRR261 pKa = 11.84KK262 pKa = 8.71MGLKK266 pKa = 8.67VTLADD271 pKa = 3.26LWGPTVVVEE280 pKa = 4.44ATGTMSKK287 pKa = 10.33YY288 pKa = 10.41AVGFFSEE295 pKa = 4.88TKK297 pKa = 10.18VSCHH301 pKa = 6.76PISKK305 pKa = 9.91ISPEE309 pKa = 3.8VAKK312 pKa = 10.5IIWACTTTIGQAVVIIQASSRR333 pKa = 11.84SEE335 pKa = 3.92LLTAEE340 pKa = 5.27DD341 pKa = 4.56IEE343 pKa = 5.03CKK345 pKa = 9.86GTTSIKK351 pKa = 10.21KK352 pKa = 9.33SAVKK356 pKa = 10.21EE357 pKa = 3.82FSLFSKK363 pKa = 9.75PAKK366 pKa = 10.18

Molecular weight: 40.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

2

8

5122

187

2263

640.3

71.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.111 ± 0.723

2.148 ± 0.337

4.979 ± 0.695

4.666 ± 0.249

3.182 ± 0.498

5.037 ± 0.361

2.382 ± 0.393

7.927 ± 0.598

4.861 ± 0.534

10.406 ± 0.996

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.245 ± 0.288

5.174 ± 0.637

4.861 ± 0.539

5.271 ± 0.575

4.627 ± 0.319

9.762 ± 0.428

7.321 ± 0.432

5.018 ± 0.672

1.132 ± 0.235

2.889 ± 0.528
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski