Mesta yellow vein mosaic Bahraich virus-[India:Bahraich:2007]

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Mesta yellow vein mosaic Bahraich virus

Average proteome isoelectric point is 7.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B1PAJ0|B1PAJ0_9GEMI AC4 OS=Mesta yellow vein mosaic Bahraich virus-[India:Bahraich:2007] OX=508749 GN=AC4 PE=3 SV=1
MM1 pKa = 7.74PPRR4 pKa = 11.84RR5 pKa = 11.84NGIYY9 pKa = 10.25SKK11 pKa = 10.68DD12 pKa = 3.68YY13 pKa = 9.69FVTYY17 pKa = 8.32PKK19 pKa = 10.65CSLTKK24 pKa = 10.69EE25 pKa = 4.12EE26 pKa = 5.36ALSQLLNLQTPTSKK40 pKa = 10.57KK41 pKa = 9.41YY42 pKa = 10.62IRR44 pKa = 11.84ICRR47 pKa = 11.84EE48 pKa = 3.51LHH50 pKa = 6.09EE51 pKa = 5.96DD52 pKa = 3.11GTPRR56 pKa = 11.84VRR58 pKa = 11.84VLIQFEE64 pKa = 4.97GKK66 pKa = 10.06FKK68 pKa = 9.6CQNMRR73 pKa = 11.84FFDD76 pKa = 4.16LVSPSWSAHH85 pKa = 4.35FRR87 pKa = 11.84PNIQGAKK94 pKa = 9.58SSSDD98 pKa = 3.06VKK100 pKa = 11.23SYY102 pKa = 10.8IEE104 pKa = 4.18KK105 pKa = 10.92DD106 pKa = 3.16GDD108 pKa = 3.65ILDD111 pKa = 3.83WGQFQIDD118 pKa = 3.44GRR120 pKa = 11.84SARR123 pKa = 11.84GGQQTANDD131 pKa = 4.05AYY133 pKa = 10.69AAALNAGSKK142 pKa = 10.26SEE144 pKa = 4.31AIRR147 pKa = 11.84VIKK150 pKa = 10.15EE151 pKa = 3.57LAPKK155 pKa = 10.6DD156 pKa = 3.7FVLQFHH162 pKa = 6.7NLNANLNRR170 pKa = 11.84IFQEE174 pKa = 4.12PPAPYY179 pKa = 9.91VSPFSSSSFDD189 pKa = 3.41QVPEE193 pKa = 4.03EE194 pKa = 4.1LEE196 pKa = 3.86EE197 pKa = 4.02WASEE201 pKa = 4.17NVVDD205 pKa = 5.24AAARR209 pKa = 11.84PLRR212 pKa = 11.84PQSIVIEE219 pKa = 4.44GDD221 pKa = 3.12SRR223 pKa = 11.84TGKK226 pKa = 8.52TMWARR231 pKa = 11.84SLGPHH236 pKa = 6.71NYY238 pKa = 10.18LCGHH242 pKa = 7.38LDD244 pKa = 4.18LSPKK248 pKa = 10.15VYY250 pKa = 11.07SNDD253 pKa = 2.25AWYY256 pKa = 10.92NVIDD260 pKa = 5.2DD261 pKa = 4.41VDD263 pKa = 3.61PHH265 pKa = 5.85YY266 pKa = 11.0LKK268 pKa = 10.7HH269 pKa = 6.2FKK271 pKa = 10.7EE272 pKa = 4.46FMGAQRR278 pKa = 11.84DD279 pKa = 3.81WQSNTKK285 pKa = 9.6YY286 pKa = 10.57GKK288 pKa = 9.12PVQIKK293 pKa = 10.41GGIPTIFLCNPGPNASYY310 pKa = 11.2KK311 pKa = 10.7EE312 pKa = 3.97FLDD315 pKa = 3.54EE316 pKa = 5.43DD317 pKa = 4.1KK318 pKa = 11.59NSALKK323 pKa = 10.43SWALKK328 pKa = 9.99NATFVFLTQPLYY340 pKa = 11.2SGTNQSSTQGSEE352 pKa = 3.74EE353 pKa = 3.96AQQEE357 pKa = 4.53EE358 pKa = 4.95TSGPP362 pKa = 3.61

Molecular weight: 40.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B1PAI7|B1PAI7_9GEMI Replication enhancer OS=Mesta yellow vein mosaic Bahraich virus-[India:Bahraich:2007] OX=508749 GN=AC3 PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 10.21RR4 pKa = 11.84AADD7 pKa = 3.55IVISTPASKK16 pKa = 10.29VRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LNFGSPYY27 pKa = 7.94TSRR30 pKa = 11.84VAAPIVRR37 pKa = 11.84VTKK40 pKa = 9.91QQAWTNRR47 pKa = 11.84PMNRR51 pKa = 11.84KK52 pKa = 7.8PRR54 pKa = 11.84MYY56 pKa = 10.68RR57 pKa = 11.84MYY59 pKa = 10.44RR60 pKa = 11.84SPDD63 pKa = 3.21VPRR66 pKa = 11.84GCEE69 pKa = 4.34GPCKK73 pKa = 9.9VQSFVSTPDD82 pKa = 3.06VVHH85 pKa = 6.88IGKK88 pKa = 9.48VMCISDD94 pKa = 3.53VTRR97 pKa = 11.84GVGLTHH103 pKa = 7.8RR104 pKa = 11.84IGKK107 pKa = 8.54RR108 pKa = 11.84FCVKK112 pKa = 9.96SVYY115 pKa = 10.52VLGKK119 pKa = 9.41IWMDD123 pKa = 3.35EE124 pKa = 4.04NIKK127 pKa = 9.32TKK129 pKa = 10.6NHH131 pKa = 5.78TNSVMFFLVRR141 pKa = 11.84DD142 pKa = 3.84RR143 pKa = 11.84RR144 pKa = 11.84PVDD147 pKa = 3.13KK148 pKa = 10.28PQDD151 pKa = 3.56FGEE154 pKa = 4.33VFNMFDD160 pKa = 4.29NEE162 pKa = 4.11PSTATVKK169 pKa = 10.57NSHH172 pKa = 6.59RR173 pKa = 11.84DD174 pKa = 3.15RR175 pKa = 11.84YY176 pKa = 9.17QVLRR180 pKa = 11.84KK181 pKa = 8.43WHH183 pKa = 5.58ATVTGGQYY191 pKa = 11.09ASNEE195 pKa = 3.8HH196 pKa = 6.49ALVKK200 pKa = 10.69KK201 pKa = 9.38FVRR204 pKa = 11.84VNNYY208 pKa = 7.82VVYY211 pKa = 9.96NQQEE215 pKa = 3.8AGKK218 pKa = 10.1YY219 pKa = 8.23EE220 pKa = 4.02NHH222 pKa = 6.47TEE224 pKa = 3.99NALMLYY230 pKa = 7.52MACTHH235 pKa = 7.06ASNPVYY241 pKa = 10.61APLKK245 pKa = 9.09IRR247 pKa = 11.84IYY249 pKa = 10.62FYY251 pKa = 11.34DD252 pKa = 3.32SVTNN256 pKa = 3.98

Molecular weight: 29.5 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1269

112

362

181.3

20.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.886 ± 0.821

2.522 ± 0.665

4.728 ± 0.372

4.177 ± 0.688

3.94 ± 0.536

5.28 ± 0.32

3.625 ± 0.688

4.728 ± 0.601

5.201 ± 0.791

7.486 ± 1.076

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.049 ± 0.469

6.462 ± 0.722

5.989 ± 0.41

4.886 ± 0.773

7.171 ± 0.797

8.905 ± 1.279

6.068 ± 0.969

6.304 ± 1.347

1.497 ± 0.142

4.098 ± 0.408
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski