Oceanivirga miroungae

Taxonomy: cellular organisms; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Oceanivirga

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1193 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6I8MCV3|A0A6I8MCV3_9FUSO Glucose uptake protein GlcU OS=Oceanivirga miroungae OX=1130046 GN=OMES3154_00553 PE=3 SV=1
MM1 pKa = 7.51KK2 pKa = 9.84EE3 pKa = 3.81YY4 pKa = 11.3VNAEE8 pKa = 4.12MNIMEE13 pKa = 4.85AVEE16 pKa = 4.39EE17 pKa = 4.28YY18 pKa = 10.15PIIMEE23 pKa = 3.86VLMRR27 pKa = 11.84YY28 pKa = 9.82GLGCGGCIISSAEE41 pKa = 3.77TLYY44 pKa = 11.03EE45 pKa = 4.5GIAIHH50 pKa = 6.78GLDD53 pKa = 3.6PDD55 pKa = 4.82IIIEE59 pKa = 4.5EE60 pKa = 3.95INMIIEE66 pKa = 4.15MEE68 pKa = 4.01EE69 pKa = 3.98EE70 pKa = 4.03EE71 pKa = 5.2NKK73 pKa = 10.63NEE75 pKa = 4.39SNN77 pKa = 3.6

Molecular weight: 8.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6I8MCI5|A0A6I8MCI5_9FUSO CRISPR-associated endonuclease Cas9 OS=Oceanivirga miroungae OX=1130046 GN=cas9 PE=3 SV=1
MM1 pKa = 7.65AVPKK5 pKa = 10.55KK6 pKa = 9.29RR7 pKa = 11.84TSKK10 pKa = 10.63AKK12 pKa = 9.33RR13 pKa = 11.84NMRR16 pKa = 11.84RR17 pKa = 11.84AHH19 pKa = 6.48DD20 pKa = 5.06AINAPVFVKK29 pKa = 10.49EE30 pKa = 3.51ADD32 pKa = 3.54GTVRR36 pKa = 11.84RR37 pKa = 11.84PHH39 pKa = 6.69RR40 pKa = 11.84LNLEE44 pKa = 3.79TGLYY48 pKa = 9.57RR49 pKa = 11.84GRR51 pKa = 11.84QIISDD56 pKa = 3.82DD57 pKa = 3.76AEE59 pKa = 3.89

Molecular weight: 6.74 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1193

0

1193

402960

38

5731

337.8

38.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.104 ± 0.099

0.575 ± 0.024

6.045 ± 0.066

7.768 ± 0.071

4.368 ± 0.076

5.557 ± 0.136

1.14 ± 0.026

10.118 ± 0.118

10.753 ± 0.104

9.405 ± 0.094

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.222 ± 0.057

7.192 ± 0.111

2.244 ± 0.038

1.821 ± 0.025

3.102 ± 0.054

6.444 ± 0.06

4.744 ± 0.105

6.227 ± 0.058

0.471 ± 0.019

4.701 ± 0.075
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski