Murine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain MVM(p)))

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1; Minute virus of mice

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q76W05|Q76W05_MUMIP Uncharacterized protein VP OS=Murine minute virus (strain MVM prototype) OX=648235 GN=VP PE=4 SV=1
MM1 pKa = 7.73AGNAYY6 pKa = 10.27SDD8 pKa = 4.01EE9 pKa = 4.3VLGATNWLKK18 pKa = 10.73EE19 pKa = 3.92KK20 pKa = 10.84SNQEE24 pKa = 3.58VFSFVFKK31 pKa = 11.24NEE33 pKa = 3.39NVQLNGKK40 pKa = 9.6DD41 pKa = 3.49IGWNSYY47 pKa = 10.08KK48 pKa = 10.4KK49 pKa = 10.12EE50 pKa = 3.99LQEE53 pKa = 5.82DD54 pKa = 4.14EE55 pKa = 5.18LKK57 pKa = 10.86SLQRR61 pKa = 11.84GAEE64 pKa = 4.29TTWDD68 pKa = 3.39QSEE71 pKa = 4.09DD72 pKa = 3.96MEE74 pKa = 4.61WEE76 pKa = 4.24TTVDD80 pKa = 3.15EE81 pKa = 4.3MTKK84 pKa = 10.62KK85 pKa = 10.64FGTLTIHH92 pKa = 6.55DD93 pKa = 4.13TEE95 pKa = 5.41KK96 pKa = 10.94YY97 pKa = 9.93ASQPEE102 pKa = 4.59LCTNSTCIGSRR113 pKa = 11.84GPGFRR118 pKa = 11.84ALEE121 pKa = 3.97HH122 pKa = 6.05TKK124 pKa = 10.49YY125 pKa = 10.51SCCGHH130 pKa = 6.26CRR132 pKa = 11.84NPEE135 pKa = 3.57HH136 pKa = 6.55WGSWFQSLPRR146 pKa = 11.84WSTEE150 pKa = 3.52PNLVRR155 pKa = 11.84DD156 pKa = 3.64RR157 pKa = 11.84GGFEE161 pKa = 3.84SVLRR165 pKa = 11.84CGTVEE170 pKa = 4.26EE171 pKa = 4.26RR172 pKa = 11.84LQRR175 pKa = 11.84AAEE178 pKa = 4.04LGLRR182 pKa = 11.84YY183 pKa = 10.33DD184 pKa = 4.2GASSS188 pKa = 3.15

Molecular weight: 21.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q84367|Q84367_MUMIP VP1 protein OS=Murine minute virus (strain MVM prototype) OX=648235 GN=VP1 PE=1 SV=1
MM1 pKa = 7.68APPAKK6 pKa = 9.63RR7 pKa = 11.84AKK9 pKa = 9.84RR10 pKa = 11.84GKK12 pKa = 9.78GLRR15 pKa = 11.84DD16 pKa = 3.13GWLVGYY22 pKa = 10.16

Molecular weight: 2.43 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

6

11

3914

9

729

355.8

39.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.515 ± 0.47

1.788 ± 0.33

5.008 ± 0.195

6.055 ± 0.933

3.73 ± 0.144

7.971 ± 0.561

2.146 ± 0.139

3.628 ± 0.324

5.749 ± 0.867

7.128 ± 0.419

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.146 ± 0.088

6.208 ± 0.208

5.416 ± 0.532

4.829 ± 0.104

4.318 ± 0.28

6.49 ± 0.263

8.712 ± 0.223

5.851 ± 0.238

3.117 ± 0.243

3.194 ± 0.36
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski