Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) (Microsporum canis)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Microsporum; Microsporum canis

Average proteome isoelectric point is 6.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8764 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C5FZM4|C5FZM4_ARTOC Uncharacterized protein OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) OX=554155 GN=MCYG_08146 PE=4 SV=1
MM1 pKa = 7.42SRR3 pKa = 11.84PTNEE7 pKa = 3.42VTIQNSALLIAYY19 pKa = 7.5EE20 pKa = 4.42IIATKK25 pKa = 10.08GAYY28 pKa = 8.5IHH30 pKa = 6.43HH31 pKa = 5.51TVKK34 pKa = 10.3MFIVQILLDD43 pKa = 3.55IAVWLLGFTSALVPEE58 pKa = 4.75EE59 pKa = 4.25AAHH62 pKa = 6.22EE63 pKa = 4.09GHH65 pKa = 7.16PPTEE69 pKa = 3.97RR70 pKa = 11.84AEE72 pKa = 4.14MSDD75 pKa = 3.25APNFEE80 pKa = 4.41HH81 pKa = 7.16PLPYY85 pKa = 10.37EE86 pKa = 4.18GAEE89 pKa = 4.11EE90 pKa = 4.45DD91 pKa = 4.78LEE93 pKa = 5.69PDD95 pKa = 3.44TPEE98 pKa = 3.64NMTWIMDD105 pKa = 4.14YY106 pKa = 10.44PSHH109 pKa = 6.92PPLYY113 pKa = 9.66FSSSTSSQSSSSQEE127 pKa = 3.82SYY129 pKa = 11.55LEE131 pKa = 4.51IISSLEE137 pKa = 3.84ALWDD141 pKa = 3.72DD142 pKa = 4.02WDD144 pKa = 4.21PQPEE148 pKa = 4.38EE149 pKa = 3.7IDD151 pKa = 3.84YY152 pKa = 10.39PDD154 pKa = 4.43RR155 pKa = 11.84PTTPGILEE163 pKa = 4.04TTLANDD169 pKa = 3.49TGSLFSRR176 pKa = 11.84SDD178 pKa = 3.0TDD180 pKa = 4.0AEE182 pKa = 4.61SSQPMSPRR190 pKa = 11.84PATLDD195 pKa = 3.16SEE197 pKa = 5.25YY198 pKa = 11.15YY199 pKa = 10.12IFNPTGDD206 pKa = 4.75LEE208 pKa = 4.32MSDD211 pKa = 3.48TGLL214 pKa = 3.71

Molecular weight: 23.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C5FVX6|C5FVX6_ARTOC Alpha/beta hydrolase fold-3 domain-containing protein OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) OX=554155 GN=MCYG_06879 PE=4 SV=1
MM1 pKa = 7.46PRR3 pKa = 11.84ISPSQSVSQSVSQSVWEE20 pKa = 4.39EE21 pKa = 3.79GSLPQAVPSSCCRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84GLVSGDD43 pKa = 3.12MGRR46 pKa = 11.84NEE48 pKa = 4.84LKK50 pKa = 10.62LPPSRR55 pKa = 11.84FIVFSLAHH63 pKa = 6.12LRR65 pKa = 11.84WAAYY69 pKa = 9.96CFIKK73 pKa = 10.84GMLEE77 pKa = 3.71LVTYY81 pKa = 10.75VRR83 pKa = 11.84DD84 pKa = 3.6QQNNNISHH92 pKa = 6.04NRR94 pKa = 11.84VNKK97 pKa = 10.41NKK99 pKa = 8.95LTFSRR104 pKa = 4.33

Molecular weight: 11.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8764

0

8764

4258598

51

7914

485.9

53.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.042 ± 0.025

1.277 ± 0.009

5.61 ± 0.016

6.229 ± 0.024

3.648 ± 0.017

6.644 ± 0.022

2.42 ± 0.011

5.258 ± 0.02

5.101 ± 0.021

8.938 ± 0.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.133 ± 0.009

3.837 ± 0.013

6.144 ± 0.029

4.045 ± 0.018

6.155 ± 0.02

8.667 ± 0.028

5.877 ± 0.016

5.838 ± 0.019

1.333 ± 0.008

2.804 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski