Luteimonas sp. JM171

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteimonas; unclassified Luteimonas

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2668 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B3W5G1|A0A1B3W5G1_9GAMM Uncharacterized protein OS=Luteimonas sp. JM171 OX=1896164 GN=BGP89_02155 PE=4 SV=1
AA1 pKa = 7.7EE2 pKa = 5.0GVDD5 pKa = 3.49STAIGFFSHH14 pKa = 6.92AEE16 pKa = 3.86AAGSVALGVDD26 pKa = 3.77SVADD30 pKa = 3.98RR31 pKa = 11.84EE32 pKa = 4.48NTVSVGSAGNEE43 pKa = 3.49RR44 pKa = 11.84QIANVADD51 pKa = 3.79GTEE54 pKa = 3.97ATDD57 pKa = 4.38AVNLGQLEE65 pKa = 4.34AVTSDD70 pKa = 2.84THH72 pKa = 6.84YY73 pKa = 10.66FAATGDD79 pKa = 3.88GEE81 pKa = 4.66AFATGLDD88 pKa = 3.68ATASGSDD95 pKa = 3.18AFAEE99 pKa = 4.48GDD101 pKa = 3.66YY102 pKa = 10.51STATGSASWALGEE115 pKa = 4.21GASAFGSGAQAWGQYY130 pKa = 7.99ATASGFNAYY139 pKa = 10.26AEE141 pKa = 4.78GDD143 pKa = 3.65STTAVGGWLYY153 pKa = 11.35YY154 pKa = 10.23EE155 pKa = 5.26DD156 pKa = 5.04PATGDD161 pKa = 3.57VLLDD165 pKa = 3.34ATTTAFEE172 pKa = 4.35VGASAFGAGAQALGAFSTASGAAAEE197 pKa = 4.43AGGLQATATGYY208 pKa = 10.69SSSASGNYY216 pKa = 7.86STASGGFSSAGDD228 pKa = 3.53VGATALGYY236 pKa = 10.56GADD239 pKa = 3.7ASAGYY244 pKa = 8.37ATAVGTAAWAQGVSSVAVGEE264 pKa = 4.13YY265 pKa = 10.6SEE267 pKa = 4.34ATGAEE272 pKa = 4.32SVAVGGTVFGFIPSRR287 pKa = 11.84ASGAGAAAFGAGAWATGDD305 pKa = 3.39EE306 pKa = 4.5STALGWISSADD317 pKa = 3.41GDD319 pKa = 3.97YY320 pKa = 10.37STAVGAASWAEE331 pKa = 3.95AADD334 pKa = 3.93STVVGYY340 pKa = 10.5GGYY343 pKa = 10.77ASAEE347 pKa = 3.91NSVALGAGSVADD359 pKa = 4.16RR360 pKa = 11.84ADD362 pKa = 3.72SVSVGSAGGEE372 pKa = 3.67RR373 pKa = 11.84QITNVAAGTEE383 pKa = 4.26GTDD386 pKa = 3.31AVNVEE391 pKa = 4.17QLTDD395 pKa = 4.71AIAAVDD401 pKa = 3.68TEE403 pKa = 4.35GNRR406 pKa = 11.84FFDD409 pKa = 3.5ASAGVDD415 pKa = 3.54EE416 pKa = 5.5AGVGASADD424 pKa = 3.68GEE426 pKa = 4.48YY427 pKa = 9.98ATAGGEE433 pKa = 4.03LASASGDD440 pKa = 3.32LSVAMGALSDD450 pKa = 3.69ASGWGATAVGVEE462 pKa = 4.61SVASGEE468 pKa = 3.83LAAAFGGAAEE478 pKa = 4.29AFGDD482 pKa = 4.44FSTALGGFSTAAGYY496 pKa = 11.09NSTALGNFATATADD510 pKa = 3.3NSVALGADD518 pKa = 3.38SVADD522 pKa = 3.92RR523 pKa = 11.84DD524 pKa = 3.91NTVSVGSEE532 pKa = 3.65GSEE535 pKa = 3.59RR536 pKa = 11.84QITNVAAGTEE546 pKa = 4.23GTDD549 pKa = 4.02AVNLGQLEE557 pKa = 4.09EE558 pKa = 4.05ATAYY562 pKa = 9.64NQYY565 pKa = 10.09FRR567 pKa = 11.84ATGEE571 pKa = 4.13GEE573 pKa = 3.64AWAVGEE579 pKa = 4.55DD580 pKa = 3.34ATAAGSNAWAGGDD593 pKa = 3.47YY594 pKa = 9.68STAVGSTAEE603 pKa = 3.82AWMEE607 pKa = 3.89GASAFGSGAFALEE620 pKa = 4.18EE621 pKa = 3.95NATALGFNTVAGGIDD636 pKa = 3.6AVALGSYY643 pKa = 10.43AEE645 pKa = 4.6AYY647 pKa = 9.98GEE649 pKa = 3.84QSIALGSQAYY659 pKa = 9.45AAEE662 pKa = 4.46TGASAIGAGAVAEE675 pKa = 4.55GAYY678 pKa = 8.92STATGSEE685 pKa = 3.84ASASGLQGTATGFRR699 pKa = 11.84SEE701 pKa = 3.97ASGDD705 pKa = 3.14GSAAYY710 pKa = 9.75GGYY713 pKa = 9.98SVAQGFGASALGYY726 pKa = 9.49GANALADD733 pKa = 3.78GATAVGFAADD743 pKa = 3.56ASGEE747 pKa = 4.16SSVAVGEE754 pKa = 4.05AAIASGFNSVAVGGASFFGLLPTEE778 pKa = 4.13ATGDD782 pKa = 3.62YY783 pKa = 8.57ATAVGAGSWAPGANGTALGSLSMATGVDD811 pKa = 3.74SLAVGADD818 pKa = 3.2AFASAEE824 pKa = 4.13GAVALGVGSEE834 pKa = 3.91ADD836 pKa = 3.3RR837 pKa = 11.84DD838 pKa = 3.94YY839 pKa = 11.58SVSVGSAGNEE849 pKa = 3.59RR850 pKa = 11.84QITNVAAGTEE860 pKa = 4.1ATDD863 pKa = 4.26AVNLGQLEE871 pKa = 4.38AVTGDD876 pKa = 3.34THH878 pKa = 6.85YY879 pKa = 10.57FAASGEE885 pKa = 4.22GQAWATGDD893 pKa = 3.75DD894 pKa = 3.84ATASGSDD901 pKa = 3.29AFAEE905 pKa = 4.72GDD907 pKa = 3.43FSTATGATSFAVGQGASAFGSGAQAWGQYY936 pKa = 7.97ATASGYY942 pKa = 10.39NAVAEE947 pKa = 4.79GDD949 pKa = 3.51SSTAVGGWLYY959 pKa = 11.35YY960 pKa = 10.19EE961 pKa = 5.18DD962 pKa = 4.72PATGEE967 pKa = 4.15VLLDD971 pKa = 3.41QTTTALEE978 pKa = 4.32AGASAFGAGAQALGAFSTATGAASTAEE1005 pKa = 4.17GLQATATGYY1014 pKa = 11.04SSTASGLASTANGGFSEE1031 pKa = 4.32ATGEE1035 pKa = 3.95FSTALGYY1042 pKa = 10.7GAVASNTRR1050 pKa = 11.84TTAVGISAEE1059 pKa = 3.98ASGLNATAVGNTATASGSAGVAVGSSSSASGVNGTAVGGTAWATGEE1105 pKa = 4.2DD1106 pKa = 3.93ATALGQFAWATRR1118 pKa = 11.84AGATALGQDD1127 pKa = 3.44TFAYY1131 pKa = 10.36ADD1133 pKa = 3.55GATAVGASAWSNGVNSVALGSGSRR1157 pKa = 11.84ASADD1161 pKa = 3.07NVVSVGNGTGNSGFPATRR1179 pKa = 11.84RR1180 pKa = 11.84IVNVSDD1186 pKa = 4.34GVDD1189 pKa = 3.64DD1190 pKa = 4.17NDD1192 pKa = 3.89AVNVGQMGEE1201 pKa = 4.38FVAEE1205 pKa = 4.38ANRR1208 pKa = 11.84HH1209 pKa = 4.12FQATGEE1215 pKa = 3.99ADD1217 pKa = 3.32AYY1219 pKa = 10.92ALGEE1223 pKa = 4.09EE1224 pKa = 4.56STAAGANAYY1233 pKa = 10.21AEE1235 pKa = 4.65ADD1237 pKa = 3.57YY1238 pKa = 9.9STAVGSASSAFEE1250 pKa = 4.27LGASAFGSGALAGQQQATAVGFNASAAGSNSSAFGAGADD1289 pKa = 3.74AYY1291 pKa = 10.31GDD1293 pKa = 3.41ASTAVGGQGEE1303 pKa = 4.37AFDD1306 pKa = 3.92EE1307 pKa = 4.79FGWPIEE1313 pKa = 4.21DD1314 pKa = 4.14SEE1316 pKa = 4.66GNPVLVAATAADD1328 pKa = 3.74RR1329 pKa = 11.84GTAVGAGAQSTGTGSASLGYY1349 pKa = 9.45GARR1352 pKa = 11.84AEE1354 pKa = 4.7GEE1356 pKa = 3.81FSLAGGHH1363 pKa = 6.53KK1364 pKa = 9.93AHH1366 pKa = 6.73AQGGYY1371 pKa = 7.59TVSLGDD1377 pKa = 3.44NSRR1380 pKa = 11.84ANGDD1384 pKa = 3.12QSTATGSYY1392 pKa = 10.02AWATEE1397 pKa = 4.14SGSTALGSFAWATGEE1412 pKa = 3.8EE1413 pKa = 4.19ATAVGVDD1420 pKa = 3.65SYY1422 pKa = 11.44ATGRR1426 pKa = 11.84RR1427 pKa = 11.84SVSIGSGSWSPGVSSVAVGRR1447 pKa = 11.84GAFGYY1452 pKa = 10.59DD1453 pKa = 3.83DD1454 pKa = 3.58YY1455 pKa = 11.44TVAVGHH1461 pKa = 5.8QALGNDD1467 pKa = 2.75IHH1469 pKa = 7.94AIAVGTNSLANAEE1482 pKa = 4.15SAIAIGAGATVAATAPNSVALGSGSVAEE1510 pKa = 4.39RR1511 pKa = 11.84EE1512 pKa = 4.19RR1513 pKa = 11.84TLSVGSVGNEE1523 pKa = 3.43RR1524 pKa = 11.84QITNVAAGTQDD1535 pKa = 3.01TDD1537 pKa = 3.82AVNLGQLNAVADD1549 pKa = 4.51GVTALADD1556 pKa = 3.6SAVVYY1561 pKa = 10.87DD1562 pKa = 4.42DD1563 pKa = 4.75DD1564 pKa = 4.46SRR1566 pKa = 11.84GAITLAGEE1574 pKa = 4.2EE1575 pKa = 4.52GTLVTNLADD1584 pKa = 3.83GEE1586 pKa = 4.51VSAEE1590 pKa = 4.06STDD1593 pKa = 3.51AVTGSQLFEE1602 pKa = 4.01TNEE1605 pKa = 3.87RR1606 pKa = 11.84VGVVEE1611 pKa = 5.01GRR1613 pKa = 11.84VDD1615 pKa = 3.76DD1616 pKa = 4.35LDD1618 pKa = 3.81VRR1620 pKa = 11.84IGDD1623 pKa = 3.91VEE1625 pKa = 4.5GMASNAISYY1634 pKa = 10.74DD1635 pKa = 3.5DD1636 pKa = 4.65DD1637 pKa = 3.83SRR1639 pKa = 11.84AVATLDD1645 pKa = 3.64GEE1647 pKa = 4.65GGTRR1651 pKa = 11.84LTNLAPGLIRR1661 pKa = 11.84NGSSDD1666 pKa = 3.78AVTGGQVFASMGTIATALGGGTVVDD1691 pKa = 3.97ANGRR1695 pKa = 11.84LIGTVYY1701 pKa = 10.46SVQGNYY1707 pKa = 9.66YY1708 pKa = 9.87GNVGEE1713 pKa = 5.47ALAALDD1719 pKa = 3.44THH1721 pKa = 7.72LEE1723 pKa = 4.21GFGNRR1728 pKa = 11.84LSGVEE1733 pKa = 4.13AIVRR1737 pKa = 11.84SAQGPGNGRR1746 pKa = 11.84VAVGGAGRR1754 pKa = 11.84AQLGAEE1760 pKa = 5.09DD1761 pKa = 4.2INAIAAGDD1769 pKa = 3.65DD1770 pKa = 4.09AYY1772 pKa = 11.05AHH1774 pKa = 6.67GPNDD1778 pKa = 3.21IAIGGNAKK1786 pKa = 10.03VNADD1790 pKa = 2.9GSTAVGSNATITADD1804 pKa = 3.1ATNAVAIGEE1813 pKa = 4.43GTSVSAASGTAVGQGASVTAEE1834 pKa = 3.88GAVALGQGSVADD1846 pKa = 4.17RR1847 pKa = 11.84ANTVSVGAEE1856 pKa = 3.68GSEE1859 pKa = 3.79RR1860 pKa = 11.84QIVNVAAGTADD1871 pKa = 3.25TDD1873 pKa = 3.81AANVGQVNAAAAQSRR1888 pKa = 11.84SYY1890 pKa = 10.24TDD1892 pKa = 3.31TVATQTLSSANAYY1905 pKa = 8.31TDD1907 pKa = 3.12QQFAVWNDD1915 pKa = 2.76NFEE1918 pKa = 4.27AFRR1921 pKa = 11.84GDD1923 pKa = 3.47VEE1925 pKa = 5.05RR1926 pKa = 11.84RR1927 pKa = 11.84FHH1929 pKa = 7.47DD1930 pKa = 3.02VDD1932 pKa = 4.0RR1933 pKa = 11.84RR1934 pKa = 11.84LDD1936 pKa = 3.47RR1937 pKa = 11.84QGAMSAAMLNMATSAAGIRR1956 pKa = 11.84TQNRR1960 pKa = 11.84IGVGVGFQSGEE1971 pKa = 4.01SALSVGYY1978 pKa = 9.93QRR1980 pKa = 11.84AISEE1984 pKa = 4.23RR1985 pKa = 11.84ATITFGGAFSGDD1997 pKa = 3.53EE1998 pKa = 4.05SSVGIGAGFGWW2009 pKa = 3.8

Molecular weight: 193.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B3W7M5|A0A1B3W7M5_9GAMM Uncharacterized protein OS=Luteimonas sp. JM171 OX=1896164 GN=BGP89_06615 PE=4 SV=1
MM1 pKa = 7.29HH2 pKa = 7.3HH3 pKa = 7.24PSASPEE9 pKa = 4.11SRR11 pKa = 11.84FLRR14 pKa = 11.84QALAGAAFLGLVAVSTLSAARR35 pKa = 11.84GGGPVGALALWLPGLPLLALAALALAGSRR64 pKa = 11.84GHH66 pKa = 7.07RR67 pKa = 11.84DD68 pKa = 3.27APASRR73 pKa = 11.84PAPASSRR80 pKa = 11.84RR81 pKa = 11.84RR82 pKa = 11.84ARR84 pKa = 11.84PAQARR89 pKa = 11.84RR90 pKa = 11.84RR91 pKa = 11.84APARR95 pKa = 11.84PAHH98 pKa = 5.78PRR100 pKa = 11.84RR101 pKa = 11.84RR102 pKa = 11.84AAAA105 pKa = 3.68

Molecular weight: 10.77 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2668

0

2668

882712

41

2925

330.9

35.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.072 ± 0.076

0.744 ± 0.013

6.011 ± 0.038

6.122 ± 0.049

3.301 ± 0.027

9.132 ± 0.05

2.192 ± 0.025

4.068 ± 0.039

2.129 ± 0.042

10.601 ± 0.067

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.315 ± 0.023

2.282 ± 0.032

5.527 ± 0.037

3.544 ± 0.027

8.205 ± 0.055

4.931 ± 0.045

4.553 ± 0.036

7.595 ± 0.043

1.54 ± 0.021

2.138 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski