Alces alces faeces associated genomovirus MP84

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus alces1

Average proteome isoelectric point is 7.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5CK60|A0A2Z5CK60_9VIRU Replication-associated protein OS=Alces alces faeces associated genomovirus MP84 OX=2219116 PE=3 SV=1
MM1 pKa = 7.88PRR3 pKa = 11.84FLCNASHH10 pKa = 7.43FLITYY15 pKa = 7.23AQCGDD20 pKa = 3.42LSEE23 pKa = 4.27WRR25 pKa = 11.84VLDD28 pKa = 4.01CFTLLGAQCIIARR41 pKa = 11.84EE42 pKa = 3.97YY43 pKa = 11.19HH44 pKa = 6.63EE45 pKa = 5.57DD46 pKa = 3.53LGIHH50 pKa = 5.87LHH52 pKa = 5.56VFVDD56 pKa = 4.71FRR58 pKa = 11.84RR59 pKa = 11.84KK60 pKa = 8.85FRR62 pKa = 11.84SRR64 pKa = 11.84RR65 pKa = 11.84VDD67 pKa = 2.84IFDD70 pKa = 3.17VDD72 pKa = 3.57GRR74 pKa = 11.84HH75 pKa = 6.05PNIKK79 pKa = 9.98RR80 pKa = 11.84SWGTPEE86 pKa = 4.27KK87 pKa = 10.76GYY89 pKa = 10.97DD90 pKa = 3.47YY91 pKa = 10.69AIKK94 pKa = 10.87DD95 pKa = 3.59GDD97 pKa = 4.01VVAGGLEE104 pKa = 4.18RR105 pKa = 11.84PDD107 pKa = 3.36GTFGSGKK114 pKa = 9.79NFDD117 pKa = 4.27LWSQIAGAGSKK128 pKa = 11.05AEE130 pKa = 4.04FWDD133 pKa = 3.76LCEE136 pKa = 4.22EE137 pKa = 4.73LDD139 pKa = 4.84PKK141 pKa = 11.48SMWCSFGQLQKK152 pKa = 10.65FADD155 pKa = 3.31WRR157 pKa = 11.84FAEE160 pKa = 4.67VPTEE164 pKa = 3.85YY165 pKa = 10.89ANPGGFEE172 pKa = 4.08FVDD175 pKa = 4.28GNDD178 pKa = 4.25DD179 pKa = 3.56GRR181 pKa = 11.84TAPMSLVLYY190 pKa = 10.49GEE192 pKa = 4.26SRR194 pKa = 11.84TGKK197 pKa = 7.35TLWARR202 pKa = 11.84SLGPHH207 pKa = 7.22IYY209 pKa = 10.46NVGLVSGEE217 pKa = 4.0EE218 pKa = 4.6CSRR221 pKa = 11.84APHH224 pKa = 5.21VKK226 pKa = 10.21YY227 pKa = 10.68AVFDD231 pKa = 4.9DD232 pKa = 3.28IRR234 pKa = 11.84GGIKK238 pKa = 9.97FFPAFKK244 pKa = 9.79EE245 pKa = 4.03WLGGQSTVCVKK256 pKa = 10.49RR257 pKa = 11.84LYY259 pKa = 10.38RR260 pKa = 11.84DD261 pKa = 3.5PKK263 pKa = 10.22LVTWGKK269 pKa = 9.15PSIWVSNDD277 pKa = 3.26DD278 pKa = 4.22PRR280 pKa = 11.84HH281 pKa = 5.73AMDD284 pKa = 5.22PSDD287 pKa = 4.5VSWLEE292 pKa = 3.46ANARR296 pKa = 11.84FIEE299 pKa = 3.97ITEE302 pKa = 4.67PIFRR306 pKa = 11.84ANTGG310 pKa = 3.1

Molecular weight: 35.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z5CK60|A0A2Z5CK60_9VIRU Replication-associated protein OS=Alces alces faeces associated genomovirus MP84 OX=2219116 PE=3 SV=1
MM1 pKa = 8.1AYY3 pKa = 10.29RR4 pKa = 11.84STKK7 pKa = 9.25RR8 pKa = 11.84RR9 pKa = 11.84SPVRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84YY16 pKa = 8.77PARR19 pKa = 11.84KK20 pKa = 8.78YY21 pKa = 10.63GGRR24 pKa = 11.84TTRR27 pKa = 11.84RR28 pKa = 11.84SYY30 pKa = 11.03AKK32 pKa = 10.03KK33 pKa = 8.36RR34 pKa = 11.84TYY36 pKa = 10.13RR37 pKa = 11.84KK38 pKa = 9.41KK39 pKa = 10.78ASSKK43 pKa = 9.65MSNKK47 pKa = 10.07RR48 pKa = 11.84ILNLTSIKK56 pKa = 10.5KK57 pKa = 9.84RR58 pKa = 11.84DD59 pKa = 3.76TMLSAYY65 pKa = 10.05QLGSTVNPQPGAYY78 pKa = 8.42PVQGTGGGNGGNTTVLLWCATARR101 pKa = 11.84DD102 pKa = 3.84NTVISGGGSGNRR114 pKa = 11.84FTPATRR120 pKa = 11.84TATTCFMRR128 pKa = 11.84GLAEE132 pKa = 4.03NVEE135 pKa = 4.47LSTNTGVAWQWRR147 pKa = 11.84RR148 pKa = 11.84ICFTFKK154 pKa = 11.11DD155 pKa = 4.2PGALSQTQTYY165 pKa = 9.9FLEE168 pKa = 4.71TSSGFQRR175 pKa = 11.84NNYY178 pKa = 9.01NVTSGSSPDD187 pKa = 3.44STNLEE192 pKa = 4.09NLRR195 pKa = 11.84QLVFRR200 pKa = 11.84GQLGTDD206 pKa = 2.82WSSYY210 pKa = 7.89LTAPVDD216 pKa = 3.92NSRR219 pKa = 11.84CTIKK223 pKa = 10.57YY224 pKa = 10.32DD225 pKa = 2.84KK226 pKa = 8.17TTNVNSGNANGKK238 pKa = 9.0LVNRR242 pKa = 11.84KK243 pKa = 8.13LWMPMNSNLVYY254 pKa = 10.84DD255 pKa = 4.53DD256 pKa = 5.43DD257 pKa = 4.34EE258 pKa = 6.52LGGAEE263 pKa = 4.05AARR266 pKa = 11.84PYY268 pKa = 10.82SIGGKK273 pKa = 9.45QGMGDD278 pKa = 4.24YY279 pKa = 10.98YY280 pKa = 11.77VMDD283 pKa = 3.99IFQAGVGATSSDD295 pKa = 3.62LLSFLPQATLYY306 pKa = 9.14WHH308 pKa = 6.98EE309 pKa = 4.28KK310 pKa = 9.3

Molecular weight: 34.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

620

310

310

310.0

34.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.774 ± 0.0

1.935 ± 0.482

6.129 ± 1.446

4.032 ± 1.326

4.839 ± 1.446

9.839 ± 0.121

1.452 ± 0.844

3.548 ± 0.964

5.161 ± 0.241

7.258 ± 0.121

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.935 ± 0.482

5.0 ± 1.567

4.516 ± 0.482

2.903 ± 0.723

7.742 ± 0.482

7.581 ± 1.085

7.097 ± 2.411

5.484 ± 0.482

2.742 ± 0.603

4.032 ± 0.844
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski