Avian orthoavulavirus 9

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C0J7I1|C0J7I1_9MONO Phosphoprotein OS=Avian orthoavulavirus 9 OX=2560326 GN=P PE=2 SV=1
MM1 pKa = 7.53SSIFNEE7 pKa = 4.23YY8 pKa = 10.46EE9 pKa = 4.02SLLEE13 pKa = 4.17SQLKK17 pKa = 7.98PTGSNVLGEE26 pKa = 4.63KK27 pKa = 10.64GDD29 pKa = 3.86TPKK32 pKa = 10.59VEE34 pKa = 3.74IPVFVLNSDD43 pKa = 3.66NPEE46 pKa = 4.08DD47 pKa = 3.28RR48 pKa = 11.84WNFTTFCLRR57 pKa = 11.84VAVSEE62 pKa = 4.19DD63 pKa = 3.04ANRR66 pKa = 11.84PLRR69 pKa = 11.84QGALISLLCAHH80 pKa = 6.04SQVMKK85 pKa = 10.38NHH87 pKa = 5.4VAIAGKK93 pKa = 9.41QDD95 pKa = 3.04EE96 pKa = 4.36ALIVVLEE103 pKa = 4.28IDD105 pKa = 4.35TINDD109 pKa = 3.42GVPAFNNRR117 pKa = 11.84SGVTEE122 pKa = 3.81EE123 pKa = 3.8RR124 pKa = 11.84AQRR127 pKa = 11.84FAMIAQALPRR137 pKa = 11.84ACANGTPFTVQDD149 pKa = 3.92AEE151 pKa = 4.45DD152 pKa = 5.05DD153 pKa = 4.07PVEE156 pKa = 5.46DD157 pKa = 3.86ITDD160 pKa = 3.76ALDD163 pKa = 4.65RR164 pKa = 11.84ILSIQAQVWVTVAKK178 pKa = 10.87SMTAYY183 pKa = 7.35EE184 pKa = 4.18TADD187 pKa = 3.22EE188 pKa = 4.55SEE190 pKa = 4.28QKK192 pKa = 10.81RR193 pKa = 11.84LTKK196 pKa = 10.28YY197 pKa = 7.97VQQGRR202 pKa = 11.84VQKK205 pKa = 10.66KK206 pKa = 8.54CMIYY210 pKa = 9.04PVCRR214 pKa = 11.84SMLQQIIRR222 pKa = 11.84QSLAVRR228 pKa = 11.84RR229 pKa = 11.84FIVSEE234 pKa = 3.93LKK236 pKa = 10.21RR237 pKa = 11.84ARR239 pKa = 11.84NTAGGTSTYY248 pKa = 10.27YY249 pKa = 11.15NFVADD254 pKa = 3.44VDD256 pKa = 4.31SYY258 pKa = 11.5IRR260 pKa = 11.84NAGLTAFFLTLKK272 pKa = 10.55YY273 pKa = 10.58GVNTKK278 pKa = 9.96TSVLALSSLAGDD290 pKa = 4.21LQTVKK295 pKa = 10.81QLMRR299 pKa = 11.84LYY301 pKa = 10.14KK302 pKa = 10.69AKK304 pKa = 10.73GDD306 pKa = 3.84DD307 pKa = 3.88APYY310 pKa = 8.26MTILGDD316 pKa = 3.55GDD318 pKa = 3.65QMRR321 pKa = 11.84FAPAEE326 pKa = 3.87YY327 pKa = 10.11AQLYY331 pKa = 8.96SYY333 pKa = 11.23AMGMASVIDD342 pKa = 4.19KK343 pKa = 8.02GTSRR347 pKa = 11.84YY348 pKa = 9.45QYY350 pKa = 11.43ARR352 pKa = 11.84DD353 pKa = 3.59FLNPSFWRR361 pKa = 11.84LGVEE365 pKa = 4.2YY366 pKa = 10.49AQTQGSNINEE376 pKa = 3.88EE377 pKa = 4.19MASEE381 pKa = 4.57LKK383 pKa = 10.57LSPIARR389 pKa = 11.84RR390 pKa = 11.84MLTTAVTKK398 pKa = 10.63VATGASDD405 pKa = 3.65YY406 pKa = 11.23SVPQHH411 pKa = 5.47TAGVLTGLNSTDD423 pKa = 3.81GNLGSQKK430 pKa = 10.48LPTSIQQDD438 pKa = 3.85QNDD441 pKa = 4.07DD442 pKa = 3.37TAMLNFMRR450 pKa = 11.84AVAQGMKK457 pKa = 7.77EE458 pKa = 4.31TPIQAPPTPGFGSQQAADD476 pKa = 4.58DD477 pKa = 4.62DD478 pKa = 4.77DD479 pKa = 5.88SRR481 pKa = 11.84DD482 pKa = 3.69QADD485 pKa = 2.95SWGLL489 pKa = 3.37

Molecular weight: 53.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C0J7I3|C0J7I3_9MONO Fusion glycoprotein F0 OS=Avian orthoavulavirus 9 OX=2560326 GN=F PE=2 SV=1
MM1 pKa = 7.88DD2 pKa = 5.6ASRR5 pKa = 11.84MISLYY10 pKa = 10.66VDD12 pKa = 3.63PTSSSSSILAFPIVMEE28 pKa = 4.05ATGDD32 pKa = 3.46GRR34 pKa = 11.84KK35 pKa = 9.5QISPQYY41 pKa = 9.53RR42 pKa = 11.84IQRR45 pKa = 11.84LDD47 pKa = 2.93HH48 pKa = 6.58WSDD51 pKa = 3.06SSRR54 pKa = 11.84DD55 pKa = 3.45AVFITTYY62 pKa = 10.87GFIFGYY68 pKa = 9.09PKK70 pKa = 10.46SRR72 pKa = 11.84ADD74 pKa = 3.37RR75 pKa = 11.84GQLNEE80 pKa = 4.35EE81 pKa = 3.94IRR83 pKa = 11.84PVLLSAATLCLGSVANTGDD102 pKa = 3.17QVAIARR108 pKa = 11.84ACLSLQISCKK118 pKa = 10.16KK119 pKa = 10.37SATSEE124 pKa = 3.84EE125 pKa = 4.21KK126 pKa = 10.15MIFAITQAPQILQSCRR142 pKa = 11.84AVSQKK147 pKa = 10.03FVSVGSNKK155 pKa = 9.51CVKK158 pKa = 10.28APEE161 pKa = 4.73RR162 pKa = 11.84IEE164 pKa = 5.48GGQQYY169 pKa = 10.46DD170 pKa = 3.73YY171 pKa = 11.2KK172 pKa = 11.45VNFVSLTIVPKK183 pKa = 10.5DD184 pKa = 3.4DD185 pKa = 3.65VYY187 pKa = 11.07RR188 pKa = 11.84VPKK191 pKa = 9.9PVLSVSSPTLFRR203 pKa = 11.84LALSVNIAIDD213 pKa = 3.54INADD217 pKa = 3.39NPLSKK222 pKa = 9.61TLIKK226 pKa = 10.09TEE228 pKa = 4.23SGFEE232 pKa = 4.01ANLFLHH238 pKa = 6.64VGILSNIDD246 pKa = 3.15KK247 pKa = 10.36RR248 pKa = 11.84GKK250 pKa = 10.08KK251 pKa = 7.57VTFEE255 pKa = 4.02KK256 pKa = 10.79LEE258 pKa = 4.02KK259 pKa = 10.12KK260 pKa = 9.21IRR262 pKa = 11.84RR263 pKa = 11.84MEE265 pKa = 4.0LTAGLSDD272 pKa = 3.49MFGPSIILKK281 pKa = 10.42AKK283 pKa = 10.0GPRR286 pKa = 11.84TKK288 pKa = 10.8LMSAFFSNTGTACYY302 pKa = 9.41PIAQASPPVSKK313 pKa = 10.63ILWSQSGHH321 pKa = 4.56LQEE324 pKa = 5.18VKK326 pKa = 10.48ILVQSGTSKK335 pKa = 10.41MIALTADD342 pKa = 3.33QEE344 pKa = 4.34ITTTKK349 pKa = 10.36LDD351 pKa = 3.38QHH353 pKa = 7.05AKK355 pKa = 8.88IQSFNPFKK363 pKa = 10.82KK364 pKa = 10.52

Molecular weight: 39.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4612

364

2210

768.7

85.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.088 ± 0.861

1.93 ± 0.264

5.16 ± 0.424

4.987 ± 0.408

3.404 ± 0.447

5.551 ± 0.276

2.103 ± 0.432

6.83 ± 0.718

4.597 ± 0.443

11.058 ± 1.119

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.407 ± 0.348

5.052 ± 0.354

4.271 ± 0.503

4.618 ± 0.509

5.421 ± 0.358

8.283 ± 0.838

6.375 ± 0.526

5.941 ± 0.633

0.867 ± 0.185

3.057 ± 0.404
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski