Acinetobacter phage AP205

Taxonomy: Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Duinviridae; Apeevirus; Apeevirus quebecense

Average proteome isoelectric point is 8.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9AZ42|Q9AZ42_9VIRU Coat protein OS=Acinetobacter phage AP205 OX=154784 PE=1 SV=1
MM1 pKa = 7.72LNACDD6 pKa = 3.9QLKK9 pKa = 8.86STSIPAFQSNVLSDD23 pKa = 3.84VLSLSDD29 pKa = 3.98AADD32 pKa = 3.01ITVKK36 pKa = 10.44HH37 pKa = 6.31RR38 pKa = 11.84IVSKK42 pKa = 10.32FGEE45 pKa = 4.28PAGSSLRR52 pKa = 11.84DD53 pKa = 3.31VAFNNYY59 pKa = 9.75KK60 pKa = 10.54LFEE63 pKa = 4.05QHH65 pKa = 6.57LGSIPQITNLWQEE78 pKa = 3.83GKK80 pKa = 10.64EE81 pKa = 3.97FFFLRR86 pKa = 11.84KK87 pKa = 9.76AKK89 pKa = 10.77ANLGKK94 pKa = 9.44WLKK97 pKa = 9.16TFKK100 pKa = 10.64LDD102 pKa = 3.64YY103 pKa = 11.07NSITVEE109 pKa = 4.0FTPGEE114 pKa = 4.57SYY116 pKa = 10.86TSATGHH122 pKa = 5.39VSVFAKK128 pKa = 10.53LSNLAHH134 pKa = 5.93WTCTADD140 pKa = 4.03VVDD143 pKa = 5.09DD144 pKa = 4.1VCHH147 pKa = 5.67LVYY150 pKa = 10.93YY151 pKa = 10.81NRR153 pKa = 11.84GLKK156 pKa = 9.71AAARR160 pKa = 11.84KK161 pKa = 9.57HH162 pKa = 5.68IGLMVPIEE170 pKa = 4.41GEE172 pKa = 4.11SGFDD176 pKa = 3.02TFSRR180 pKa = 11.84HH181 pKa = 4.55LMGVISIVPGARR193 pKa = 11.84GASVPKK199 pKa = 10.36NQEE202 pKa = 3.04TDD204 pKa = 2.9RR205 pKa = 11.84FIDD208 pKa = 3.58VEE210 pKa = 4.29PTFNMILQRR219 pKa = 11.84WVAGEE224 pKa = 3.62ITRR227 pKa = 11.84CLTLAKK233 pKa = 10.04NHH235 pKa = 6.44LGASRR240 pKa = 11.84NINGKK245 pKa = 8.33VVFHH249 pKa = 7.44DD250 pKa = 3.47AQEE253 pKa = 4.03LHH255 pKa = 7.02KK256 pKa = 11.09EE257 pKa = 4.17MIRR260 pKa = 11.84DD261 pKa = 3.93LSYY264 pKa = 10.82ATIDD268 pKa = 3.6FSNASDD274 pKa = 4.67SVLLWVVQLLFPKK287 pKa = 10.03HH288 pKa = 5.2VSYY291 pKa = 11.57VLTQYY296 pKa = 10.82RR297 pKa = 11.84SSTVQLGSDD306 pKa = 4.1LIEE309 pKa = 4.53PNKK312 pKa = 10.03LSSMGNGFTFEE323 pKa = 4.2VMTLLLLSIGRR334 pKa = 11.84IFDD337 pKa = 3.56PTCRR341 pKa = 11.84VYY343 pKa = 11.34GDD345 pKa = 3.84DD346 pKa = 4.19VIIKK350 pKa = 10.65AEE352 pKa = 4.04VADD355 pKa = 4.4DD356 pKa = 4.65FINTVSSIAFMTNNKK371 pKa = 8.38KK372 pKa = 8.16TFLKK376 pKa = 10.7GLFRR380 pKa = 11.84EE381 pKa = 4.49SCGAFQFDD389 pKa = 3.82TFDD392 pKa = 3.23IQSFEE397 pKa = 4.69FEE399 pKa = 4.04WADD402 pKa = 3.35NFTDD406 pKa = 5.81VIAICNKK413 pKa = 9.96LKK415 pKa = 10.98LIIDD419 pKa = 4.49AAQCNEE425 pKa = 3.6AVIAILRR432 pKa = 11.84NAHH435 pKa = 5.55TVICEE440 pKa = 4.43CIPVLCKK447 pKa = 10.62GPQPPDD453 pKa = 3.41FNLFLSQYY461 pKa = 10.75VYY463 pKa = 11.43DD464 pKa = 5.08DD465 pKa = 3.2NWKK468 pKa = 9.4KK469 pKa = 10.97KK470 pKa = 7.46QMKK473 pKa = 9.85SDD475 pKa = 3.74LAITKK480 pKa = 10.11LNRR483 pKa = 11.84LVDD486 pKa = 3.89KK487 pKa = 10.97QWGFFSATHH496 pKa = 5.57HH497 pKa = 6.52HH498 pKa = 7.09PEE500 pKa = 3.84EE501 pKa = 4.18LCYY504 pKa = 11.18VNIPVYY510 pKa = 10.26VPRR513 pKa = 11.84RR514 pKa = 11.84DD515 pKa = 3.63SVHH518 pKa = 6.7AGQNLFVDD526 pKa = 4.8LSNLYY531 pKa = 10.55ALRR534 pKa = 11.84FTKK537 pKa = 9.8STVRR541 pKa = 11.84GKK543 pKa = 10.73GKK545 pKa = 9.22WVNVPHH551 pKa = 7.02WVTPVGSIYY560 pKa = 9.84RR561 pKa = 11.84ASRR564 pKa = 11.84IRR566 pKa = 11.84QQYY569 pKa = 8.68PNIGEE574 pKa = 4.91LPTCYY579 pKa = 9.69WSPHH583 pKa = 4.8QLDD586 pKa = 5.71LITSS590 pKa = 4.18

Molecular weight: 66.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9AZ45|Q9AZ45_9VIRU Lysis protein OS=Acinetobacter phage AP205 OX=154784 PE=4 SV=1
MM1 pKa = 7.39NMYY4 pKa = 9.94KK5 pKa = 9.81WVPEE9 pKa = 4.24SIRR12 pKa = 11.84DD13 pKa = 3.66SGEE16 pKa = 3.87GQPSYY21 pKa = 11.61SNNGDD26 pKa = 3.77YY27 pKa = 10.89APSGPWVAAGIHH39 pKa = 5.7TMPQSLRR46 pKa = 11.84DD47 pKa = 3.63SMRR50 pKa = 11.84NSIMVTAQARR60 pKa = 11.84RR61 pKa = 11.84DD62 pKa = 3.76VIGPEE67 pKa = 3.67WGPDD71 pKa = 3.27GRR73 pKa = 11.84FTGYY77 pKa = 10.83ASVIGTPDD85 pKa = 3.92PKK87 pKa = 10.65PADD90 pKa = 3.27IVNKK94 pKa = 8.17FTVEE98 pKa = 3.69RR99 pKa = 11.84RR100 pKa = 11.84PVSNGNFQQRR110 pKa = 11.84VKK112 pKa = 11.07AGDD115 pKa = 3.48IVVAPYY121 pKa = 10.31TSDD124 pKa = 2.99GKK126 pKa = 9.55ITVKK130 pKa = 10.5LVAGQKK136 pKa = 10.14DD137 pKa = 3.55ISSTPDD143 pKa = 2.86YY144 pKa = 10.68DD145 pKa = 3.68YY146 pKa = 11.21RR147 pKa = 11.84IDD149 pKa = 3.74SSLASSAGFVVAGEE163 pKa = 3.62RR164 pKa = 11.84WYY166 pKa = 8.65YY167 pKa = 8.15TKK169 pKa = 10.6RR170 pKa = 11.84HH171 pKa = 6.14FIIPRR176 pKa = 11.84YY177 pKa = 7.01FQNWRR182 pKa = 11.84MRR184 pKa = 11.84RR185 pKa = 11.84RR186 pKa = 11.84KK187 pKa = 9.79YY188 pKa = 8.05VTGWVMPTFYY198 pKa = 10.71SPKK201 pKa = 10.09EE202 pKa = 3.51IFNRR206 pKa = 11.84LKK208 pKa = 10.93DD209 pKa = 3.65SLVPDD214 pKa = 3.99TGLVTQVWADD224 pKa = 3.54NNTKK228 pKa = 10.58RR229 pKa = 11.84MDD231 pKa = 3.69FLTAMAEE238 pKa = 4.18IPQTLSSFLDD248 pKa = 3.23ALGYY252 pKa = 10.31LGSLIKK258 pKa = 10.54DD259 pKa = 4.05FKK261 pKa = 10.69RR262 pKa = 11.84RR263 pKa = 11.84RR264 pKa = 11.84FFLNKK269 pKa = 8.26AHH271 pKa = 6.24QRR273 pKa = 11.84IRR275 pKa = 11.84NKK277 pKa = 10.54LGVSFAEE284 pKa = 3.87RR285 pKa = 11.84RR286 pKa = 11.84SQIVSKK292 pKa = 10.22YY293 pKa = 9.33DD294 pKa = 3.28RR295 pKa = 11.84KK296 pKa = 10.03IASARR301 pKa = 11.84KK302 pKa = 7.89PAIIVKK308 pKa = 9.84LRR310 pKa = 11.84QRR312 pKa = 11.84KK313 pKa = 8.38EE314 pKa = 3.83KK315 pKa = 10.57ALKK318 pKa = 10.51ALDD321 pKa = 3.35KK322 pKa = 10.69MRR324 pKa = 11.84VRR326 pKa = 11.84EE327 pKa = 4.19EE328 pKa = 3.49KK329 pKa = 10.92KK330 pKa = 9.89MIRR333 pKa = 11.84EE334 pKa = 4.27FATQAASLWLSFRR347 pKa = 11.84YY348 pKa = 9.84EE349 pKa = 4.0IMPLYY354 pKa = 10.12YY355 pKa = 10.08QSQDD359 pKa = 3.51VLDD362 pKa = 4.87VIANSTSEE370 pKa = 4.05FMTSRR375 pKa = 11.84DD376 pKa = 3.65FVAKK380 pKa = 10.13AINIGIPLEE389 pKa = 4.14WNLDD393 pKa = 3.57QEE395 pKa = 4.78NLVSQPRR402 pKa = 11.84HH403 pKa = 4.02NVMVKK408 pKa = 10.43SKK410 pKa = 10.74LSPEE414 pKa = 3.91NNIGKK419 pKa = 7.59TLSVNPFTTAWEE431 pKa = 4.11LLTLSFVVDD440 pKa = 3.13WFVNFGDD447 pKa = 4.23VIAGFTGGYY456 pKa = 9.51SDD458 pKa = 6.04DD459 pKa = 4.26SGATASWRR467 pKa = 11.84FDD469 pKa = 3.61DD470 pKa = 5.31KK471 pKa = 11.53KK472 pKa = 11.25VFHH475 pKa = 6.96LKK477 pKa = 10.34NIPSAMVIVDD487 pKa = 2.93INFYY491 pKa = 8.72TRR493 pKa = 11.84QVIDD497 pKa = 3.59PRR499 pKa = 11.84LCGGLAFSPKK509 pKa = 10.36LNLFRR514 pKa = 11.84YY515 pKa = 9.22LDD517 pKa = 3.93AMSLSWNRR525 pKa = 11.84SRR527 pKa = 11.84LKK529 pKa = 10.38ISRR532 pKa = 11.84ATT534 pKa = 3.32

Molecular weight: 60.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1290

35

590

322.5

36.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.364 ± 1.087

1.24 ± 0.64

5.736 ± 0.955

3.721 ± 0.475

5.504 ± 0.935

5.271 ± 0.626

1.938 ± 0.702

6.202 ± 0.248

6.202 ± 0.357

8.45 ± 1.534

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.326 ± 0.589

5.194 ± 0.655

4.574 ± 0.513

3.488 ± 0.18

5.814 ± 1.33

8.14 ± 0.718

5.969 ± 1.203

7.519 ± 0.567

2.016 ± 0.355

3.333 ± 0.958
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski