Cardiospermum yellow leaf curl betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 4.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B0JEU4|B0JEU4_9VIRU Beta-C1 protein OS=Cardiospermum yellow leaf curl betasatellite OX=497865 GN=beta-C1 PE=4 SV=1
MM1 pKa = 8.22PITKK5 pKa = 8.61KK6 pKa = 9.35TSSGKK11 pKa = 10.13LLQLSVNVFDD21 pKa = 4.96SKK23 pKa = 11.09FIVLLHH29 pKa = 5.76ITDD32 pKa = 3.83TKK34 pKa = 11.02SPQIQLQKK42 pKa = 10.64IKK44 pKa = 10.74LPYY47 pKa = 10.16SFNSDD52 pKa = 3.57DD53 pKa = 4.39LLINVTGLEE62 pKa = 4.19EE63 pKa = 4.56EE64 pKa = 4.57LMQHH68 pKa = 7.0LSLICDD74 pKa = 3.17EE75 pKa = 4.73HH76 pKa = 8.3VPSKK80 pKa = 11.23VYY82 pKa = 10.13TDD84 pKa = 3.81YY85 pKa = 11.3LISAIDD91 pKa = 3.48ILILEE96 pKa = 4.55NSQEE100 pKa = 4.06LGLQVLEE107 pKa = 4.36PCVVTITYY115 pKa = 7.57TVV117 pKa = 2.85

Molecular weight: 13.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B0JEU4|B0JEU4_9VIRU Beta-C1 protein OS=Cardiospermum yellow leaf curl betasatellite OX=497865 GN=beta-C1 PE=4 SV=1
MM1 pKa = 8.22PITKK5 pKa = 8.61KK6 pKa = 9.35TSSGKK11 pKa = 10.13LLQLSVNVFDD21 pKa = 4.96SKK23 pKa = 11.09FIVLLHH29 pKa = 5.76ITDD32 pKa = 3.83TKK34 pKa = 11.02SPQIQLQKK42 pKa = 10.64IKK44 pKa = 10.74LPYY47 pKa = 10.16SFNSDD52 pKa = 3.57DD53 pKa = 4.39LLINVTGLEE62 pKa = 4.19EE63 pKa = 4.56EE64 pKa = 4.57LMQHH68 pKa = 7.0LSLICDD74 pKa = 3.17EE75 pKa = 4.73HH76 pKa = 8.3VPSKK80 pKa = 11.23VYY82 pKa = 10.13TDD84 pKa = 3.81YY85 pKa = 11.3LISAIDD91 pKa = 3.48ILILEE96 pKa = 4.55NSQEE100 pKa = 4.06LGLQVLEE107 pKa = 4.36PCVVTITYY115 pKa = 7.57TVV117 pKa = 2.85

Molecular weight: 13.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

117

117

117

117.0

13.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

0.855 ± 0.0

1.709 ± 0.0

5.983 ± 0.0

5.983 ± 0.0

2.564 ± 0.0

2.564 ± 0.0

2.564 ± 0.0

10.256 ± 0.0

6.838 ± 0.0

16.239 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.709 ± 0.0

3.419 ± 0.0

4.274 ± 0.0

5.983 ± 0.0

0.0 ± 0.0

9.402 ± 0.0

7.692 ± 0.0

8.547 ± 0.0

0.0 ± 0.0

3.419 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski