Pacific flying fox associated multicomponent virus

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTS8|A0A140CTS8_9VIRU ATP-dependent helicase Rep OS=Pacific flying fox associated multicomponent virus OX=1796003 PE=3 SV=1
MM1 pKa = 7.91PLRR4 pKa = 11.84SRR6 pKa = 11.84GWCYY10 pKa = 9.27TVNNWTEE17 pKa = 3.79NDD19 pKa = 3.44EE20 pKa = 4.12EE21 pKa = 4.43LVAKK25 pKa = 10.71LSEE28 pKa = 3.86QTLYY32 pKa = 10.9HH33 pKa = 5.86IVARR37 pKa = 11.84EE38 pKa = 3.62IGEE41 pKa = 4.13EE42 pKa = 4.36GTIHH46 pKa = 6.18LQGYY50 pKa = 9.69CYY52 pKa = 10.46FKK54 pKa = 10.86NFKK57 pKa = 10.6SLAQFKK63 pKa = 10.64ALLPRR68 pKa = 11.84AHH70 pKa = 7.34LEE72 pKa = 4.34TQKK75 pKa = 9.82GTPQEE80 pKa = 4.0ASDD83 pKa = 3.95YY84 pKa = 10.13CKK86 pKa = 10.59KK87 pKa = 10.88DD88 pKa = 2.76GDD90 pKa = 4.23YY91 pKa = 11.33VEE93 pKa = 5.82SGTLPMSQKK102 pKa = 10.6RR103 pKa = 11.84KK104 pKa = 9.2GDD106 pKa = 3.37LGRR109 pKa = 11.84EE110 pKa = 3.99YY111 pKa = 10.3WEE113 pKa = 4.45EE114 pKa = 3.71QLSLAKK120 pKa = 9.99KK121 pKa = 10.53GKK123 pKa = 10.28VEE125 pKa = 3.96EE126 pKa = 4.97CDD128 pKa = 3.32PKK130 pKa = 11.25LQITHH135 pKa = 6.92FNALNAISARR145 pKa = 11.84YY146 pKa = 9.8APMPPDD152 pKa = 4.48NEE154 pKa = 5.96DD155 pKa = 3.65IDD157 pKa = 4.46NQWFYY162 pKa = 11.76GPTGTGKK169 pKa = 9.94SRR171 pKa = 11.84KK172 pKa = 9.44ARR174 pKa = 11.84GDD176 pKa = 3.38NPGCYY181 pKa = 10.14LKK183 pKa = 9.94MCNKK187 pKa = 8.77WWDD190 pKa = 3.79GYY192 pKa = 11.1LGEE195 pKa = 4.3EE196 pKa = 4.21TVLIEE201 pKa = 5.74DD202 pKa = 3.99FDD204 pKa = 4.24KK205 pKa = 10.78KK206 pKa = 10.48HH207 pKa = 5.86EE208 pKa = 4.19VLGHH212 pKa = 5.97HH213 pKa = 6.53LKK215 pKa = 9.94IWADD219 pKa = 3.87RR220 pKa = 11.84YY221 pKa = 10.85AFPAEE226 pKa = 4.25VKK228 pKa = 10.22GSKK231 pKa = 10.46VNLRR235 pKa = 11.84PKK237 pKa = 10.37KK238 pKa = 10.51IIVTSNFHH246 pKa = 6.67PNEE249 pKa = 3.63IWSDD253 pKa = 3.71LSTLDD258 pKa = 4.14PILRR262 pKa = 11.84RR263 pKa = 11.84FNVIKK268 pKa = 10.45FSNPFSYY275 pKa = 10.67LSPLRR280 pKa = 11.84YY281 pKa = 9.44LL282 pKa = 3.91

Molecular weight: 32.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTS8|A0A140CTS8_9VIRU ATP-dependent helicase Rep OS=Pacific flying fox associated multicomponent virus OX=1796003 PE=3 SV=1
MM1 pKa = 7.91PLRR4 pKa = 11.84SRR6 pKa = 11.84GWCYY10 pKa = 9.27TVNNWTEE17 pKa = 3.79NDD19 pKa = 3.44EE20 pKa = 4.12EE21 pKa = 4.43LVAKK25 pKa = 10.71LSEE28 pKa = 3.86QTLYY32 pKa = 10.9HH33 pKa = 5.86IVARR37 pKa = 11.84EE38 pKa = 3.62IGEE41 pKa = 4.13EE42 pKa = 4.36GTIHH46 pKa = 6.18LQGYY50 pKa = 9.69CYY52 pKa = 10.46FKK54 pKa = 10.86NFKK57 pKa = 10.6SLAQFKK63 pKa = 10.64ALLPRR68 pKa = 11.84AHH70 pKa = 7.34LEE72 pKa = 4.34TQKK75 pKa = 9.82GTPQEE80 pKa = 4.0ASDD83 pKa = 3.95YY84 pKa = 10.13CKK86 pKa = 10.59KK87 pKa = 10.88DD88 pKa = 2.76GDD90 pKa = 4.23YY91 pKa = 11.33VEE93 pKa = 5.82SGTLPMSQKK102 pKa = 10.6RR103 pKa = 11.84KK104 pKa = 9.2GDD106 pKa = 3.37LGRR109 pKa = 11.84EE110 pKa = 3.99YY111 pKa = 10.3WEE113 pKa = 4.45EE114 pKa = 3.71QLSLAKK120 pKa = 9.99KK121 pKa = 10.53GKK123 pKa = 10.28VEE125 pKa = 3.96EE126 pKa = 4.97CDD128 pKa = 3.32PKK130 pKa = 11.25LQITHH135 pKa = 6.92FNALNAISARR145 pKa = 11.84YY146 pKa = 9.8APMPPDD152 pKa = 4.48NEE154 pKa = 5.96DD155 pKa = 3.65IDD157 pKa = 4.46NQWFYY162 pKa = 11.76GPTGTGKK169 pKa = 9.94SRR171 pKa = 11.84KK172 pKa = 9.44ARR174 pKa = 11.84GDD176 pKa = 3.38NPGCYY181 pKa = 10.14LKK183 pKa = 9.94MCNKK187 pKa = 8.77WWDD190 pKa = 3.79GYY192 pKa = 11.1LGEE195 pKa = 4.3EE196 pKa = 4.21TVLIEE201 pKa = 5.74DD202 pKa = 3.99FDD204 pKa = 4.24KK205 pKa = 10.78KK206 pKa = 10.48HH207 pKa = 5.86EE208 pKa = 4.19VLGHH212 pKa = 5.97HH213 pKa = 6.53LKK215 pKa = 9.94IWADD219 pKa = 3.87RR220 pKa = 11.84YY221 pKa = 10.85AFPAEE226 pKa = 4.25VKK228 pKa = 10.22GSKK231 pKa = 10.46VNLRR235 pKa = 11.84PKK237 pKa = 10.37KK238 pKa = 10.51IIVTSNFHH246 pKa = 6.67PNEE249 pKa = 3.63IWSDD253 pKa = 3.71LSTLDD258 pKa = 4.14PILRR262 pKa = 11.84RR263 pKa = 11.84FNVIKK268 pKa = 10.45FSNPFSYY275 pKa = 10.67LSPLRR280 pKa = 11.84YY281 pKa = 9.44LL282 pKa = 3.91

Molecular weight: 32.62 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

282

282

282

282.0

32.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.319 ± 0.0

2.128 ± 0.0

5.674 ± 0.0

7.801 ± 0.0

3.901 ± 0.0

6.738 ± 0.0

2.837 ± 0.0

4.61 ± 0.0

8.865 ± 0.0

9.574 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.418 ± 0.0

5.319 ± 0.0

5.674 ± 0.0

3.191 ± 0.0

4.965 ± 0.0

5.674 ± 0.0

4.61 ± 0.0

3.901 ± 0.0

2.837 ± 0.0

4.965 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski