Hyella patelloides LEGE 07179

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Pleurocapsales; Hyellaceae; Hyella; Hyella patelloides

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7698 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A563VS95|A0A563VS95_9CYAN Sugar transferase OS=Hyella patelloides LEGE 07179 OX=945734 GN=H1P_2540001 PE=3 SV=1
MM1 pKa = 8.0FIGLCCNQKK10 pKa = 10.38IIINLSVRR18 pKa = 11.84IMLNRR23 pKa = 11.84VFNSLSFKK31 pKa = 10.85AIALSSFFVICHH43 pKa = 5.09VGEE46 pKa = 4.54AKK48 pKa = 10.39AQNTLEE54 pKa = 4.29VPSTDD59 pKa = 3.76YY60 pKa = 10.73QDD62 pKa = 4.94EE63 pKa = 4.4MGQVTNVNQLRR74 pKa = 11.84DD75 pKa = 3.68VSPADD80 pKa = 3.24WSYY83 pKa = 10.69EE84 pKa = 3.83ALRR87 pKa = 11.84SLVDD91 pKa = 3.76RR92 pKa = 11.84YY93 pKa = 11.19GCIAGFPNQAYY104 pKa = 9.82RR105 pKa = 11.84GSQALSRR112 pKa = 11.84YY113 pKa = 8.62EE114 pKa = 3.76FAAGLNSCLNQIEE127 pKa = 4.27RR128 pKa = 11.84LIASSEE134 pKa = 4.0AVVRR138 pKa = 11.84EE139 pKa = 4.69DD140 pKa = 3.03IDD142 pKa = 3.92TINRR146 pKa = 11.84LTQEE150 pKa = 4.41FEE152 pKa = 4.45SEE154 pKa = 3.93LATIGGRR161 pKa = 11.84IDD163 pKa = 3.52SLEE166 pKa = 3.91SRR168 pKa = 11.84TAFLEE173 pKa = 4.26DD174 pKa = 3.47NQFSTTTKK182 pKa = 10.6LNAQVVSYY190 pKa = 11.24VLGTFGDD197 pKa = 4.03EE198 pKa = 4.46RR199 pKa = 11.84PDD201 pKa = 3.49GTDD204 pKa = 2.76VDD206 pKa = 4.25DD207 pKa = 5.35QITFSSRR214 pKa = 11.84VRR216 pKa = 11.84LNFDD220 pKa = 3.23SSFTGEE226 pKa = 3.77DD227 pKa = 3.55FLRR230 pKa = 11.84VRR232 pKa = 11.84IQARR236 pKa = 11.84NITSPAEE243 pKa = 4.08SGGTNSLALNMEE255 pKa = 4.44GDD257 pKa = 3.8SEE259 pKa = 4.99NNVEE263 pKa = 5.91LDD265 pKa = 3.18DD266 pKa = 4.83LYY268 pKa = 11.52YY269 pKa = 10.16IFPVTEE275 pKa = 3.87QVTATVGTNGVDD287 pKa = 2.95VDD289 pKa = 4.72EE290 pKa = 5.49IFDD293 pKa = 3.76VVPTMGIAYY302 pKa = 8.05DD303 pKa = 3.77ALSLYY308 pKa = 10.37SAYY311 pKa = 11.26NNLIYY316 pKa = 11.03SNGNGGGAGIGASLEE331 pKa = 4.11FVEE334 pKa = 5.35WADD337 pKa = 3.9LQIGYY342 pKa = 7.93WAPNPADD349 pKa = 3.98PDD351 pKa = 3.63EE352 pKa = 4.91GNGLFNGNYY361 pKa = 7.73TAGANLNLSFLDD373 pKa = 3.28EE374 pKa = 4.39RR375 pKa = 11.84LNVAVAYY382 pKa = 10.53LRR384 pKa = 11.84GYY386 pKa = 9.21QGQGSGYY393 pKa = 10.23DD394 pKa = 3.18LGGFTGTDD402 pKa = 3.45GATDD406 pKa = 3.97PFDD409 pKa = 4.55DD410 pKa = 5.03QANSSNNFGVATSFQVFEE428 pKa = 4.01QLTVGGYY435 pKa = 9.89FGYY438 pKa = 9.05ATASLVGDD446 pKa = 4.78DD447 pKa = 4.87DD448 pKa = 4.33TNADD452 pKa = 3.34ILTWNAYY459 pKa = 7.73LTYY462 pKa = 10.46TDD464 pKa = 4.47LLKK467 pKa = 10.94EE468 pKa = 4.15GSTALVSFGQPPSLIDD484 pKa = 3.69SEE486 pKa = 4.56GDD488 pKa = 3.26ALADD492 pKa = 4.86DD493 pKa = 4.8EE494 pKa = 4.88DD495 pKa = 4.66TPFLLNVEE503 pKa = 4.25YY504 pKa = 10.4QYY506 pKa = 11.72QLNDD510 pKa = 4.94FIQLTPGAYY519 pKa = 10.3VLFNPNGNSDD529 pKa = 3.32NDD531 pKa = 4.2TIYY534 pKa = 10.89VGTVRR539 pKa = 11.84TIFSFF544 pKa = 3.57

Molecular weight: 59.3 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A563VKW9|A0A563VKW9_9CYAN Toxin of the ChpA-ChpR toxin-antitoxin system endoribonuclease OS=Hyella patelloides LEGE 07179 OX=945734 GN=chpA PE=3 SV=1
MM1 pKa = 7.55TKK3 pKa = 9.13RR4 pKa = 11.84TLGGTNRR11 pKa = 11.84KK12 pKa = 7.61QKK14 pKa = 8.99RR15 pKa = 11.84TSGFRR20 pKa = 11.84ARR22 pKa = 11.84MRR24 pKa = 11.84SHH26 pKa = 6.52TGRR29 pKa = 11.84RR30 pKa = 11.84VIRR33 pKa = 11.84SRR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 9.21KK38 pKa = 9.62GRR40 pKa = 11.84HH41 pKa = 4.8RR42 pKa = 11.84LAVV45 pKa = 3.37

Molecular weight: 5.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7698

0

7698

2095954

20

4713

272.3

30.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.294 ± 0.026

1.015 ± 0.01

5.135 ± 0.032

6.54 ± 0.033

4.126 ± 0.023

6.235 ± 0.039

1.712 ± 0.015

7.543 ± 0.024

5.607 ± 0.037

10.782 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.778 ± 0.011

5.083 ± 0.028

4.095 ± 0.021

5.124 ± 0.032

4.663 ± 0.023

6.827 ± 0.023

5.751 ± 0.028

6.079 ± 0.02

1.366 ± 0.013

3.245 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski