Acidianus filamentous virus 7

Taxonomy: Viruses; Adnaviria; Zilligvirae; Taleaviricota; Tokiviricetes; Ligamenvirales; Lipothrixviridae; Betalipothrixvirus

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 57 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A7WKM6|A7WKM6_9VIRU Uncharacterized protein OS=Acidianus filamentous virus 7 OX=346883 PE=4 SV=1
MM1 pKa = 7.51RR2 pKa = 11.84VFVHH6 pKa = 5.77VEE8 pKa = 3.83GVVDD12 pKa = 4.76VEE14 pKa = 4.48EE15 pKa = 4.51SCNDD19 pKa = 3.32EE20 pKa = 4.72LEE22 pKa = 4.37CLLIYY27 pKa = 10.74SEE29 pKa = 4.3MLEE32 pKa = 4.29KK33 pKa = 11.19YY34 pKa = 10.17GDD36 pKa = 3.77EE37 pKa = 4.58LGYY40 pKa = 10.88CYY42 pKa = 10.61GLSLQEE48 pKa = 4.14RR49 pKa = 11.84VKK51 pKa = 10.77CSHH54 pKa = 6.68GYY56 pKa = 9.89VEE58 pKa = 4.89IKK60 pKa = 10.42RR61 pKa = 3.87

Molecular weight: 7.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A7WKP9|A7WKP9_9VIRU Uncharacterized protein OS=Acidianus filamentous virus 7 OX=346883 PE=4 SV=1
MM1 pKa = 7.54TIKK4 pKa = 9.63KK5 pKa = 5.83TTFIRR10 pKa = 11.84LCFWTLSQARR20 pKa = 11.84MSGIKK25 pKa = 6.81TTPKK29 pKa = 9.97IMLYY33 pKa = 10.46FLDD36 pKa = 4.06EE37 pKa = 4.55VKK39 pKa = 10.77VSPRR43 pKa = 11.84TKK45 pKa = 10.42EE46 pKa = 3.82RR47 pKa = 11.84LLLLIDD53 pKa = 4.24EE54 pKa = 5.49LDD56 pKa = 3.53TGKK59 pKa = 8.47ITPRR63 pKa = 11.84EE64 pKa = 3.71FARR67 pKa = 11.84RR68 pKa = 11.84LFLEE72 pKa = 4.34YY73 pKa = 10.11PPPTRR78 pKa = 11.84KK79 pKa = 9.97GRR81 pKa = 11.84VLSLKK86 pKa = 8.45EE87 pKa = 4.02FKK89 pKa = 10.57RR90 pKa = 11.84ITSLGKK96 pKa = 10.09

Molecular weight: 11.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

57

0

57

10625

49

593

186.4

21.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.158 ± 0.324

1.12 ± 0.15

4.631 ± 0.319

6.936 ± 0.455

4.461 ± 0.239

5.449 ± 0.265

1.384 ± 0.181

8.687 ± 0.424

7.605 ± 0.552

9.289 ± 0.262

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.212 ± 0.163

5.12 ± 0.247

3.981 ± 0.301

3.313 ± 0.338

3.821 ± 0.332

6.456 ± 0.535

5.911 ± 0.435

8.132 ± 0.388

0.932 ± 0.114

5.393 ± 0.31
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski