Black sea bass polyomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Centropristis striata polyomavirus 1

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1C723|A0A0A1C723_9POLY SLT OS=Black sea bass polyomavirus 1 OX=1572341 PE=4 SV=1
MM1 pKa = 7.59SEE3 pKa = 3.81QSNSFEE9 pKa = 3.97PRR11 pKa = 11.84LRR13 pKa = 11.84RR14 pKa = 11.84ALGEE18 pKa = 4.04HH19 pKa = 5.93NNPRR23 pKa = 11.84KK24 pKa = 9.72SVRR27 pKa = 11.84EE28 pKa = 3.87CWEE31 pKa = 3.61SWKK34 pKa = 10.94AEE36 pKa = 4.07QQKK39 pKa = 10.33KK40 pKa = 9.87PSLSEE45 pKa = 3.58EE46 pKa = 3.74DD47 pKa = 3.17RR48 pKa = 11.84GYY50 pKa = 10.83GDD52 pKa = 4.56SMVTLYY58 pKa = 10.35EE59 pKa = 3.86QYY61 pKa = 9.63TQVEE65 pKa = 4.51SALEE69 pKa = 4.1SFSASQTPEE78 pKa = 3.77KK79 pKa = 10.55VSPVQFDD86 pKa = 3.48EE87 pKa = 4.13PLRR90 pKa = 11.84EE91 pKa = 4.09FLCSYY96 pKa = 11.01AGFGHH101 pKa = 6.77SYY103 pKa = 10.98ILMCGEE109 pKa = 4.73EE110 pKa = 4.06KK111 pKa = 10.03WKK113 pKa = 10.45LYY115 pKa = 10.13QRR117 pKa = 11.84ILFTYY122 pKa = 7.9RR123 pKa = 11.84TEE125 pKa = 5.21DD126 pKa = 3.35RR127 pKa = 11.84FCLSRR132 pKa = 11.84PTPKK136 pKa = 9.79GTVYY140 pKa = 10.8YY141 pKa = 10.09ISIKK145 pKa = 8.07TRR147 pKa = 11.84YY148 pKa = 9.3RR149 pKa = 11.84IGGDD153 pKa = 3.63VVWNKK158 pKa = 9.67CRR160 pKa = 11.84AIGADD165 pKa = 3.09SWFEE169 pKa = 3.71LSAVKK174 pKa = 10.23VKK176 pKa = 10.45KK177 pKa = 9.88YY178 pKa = 9.99QQLKK182 pKa = 9.68ACAFGLGGVEE192 pKa = 3.68ITEE195 pKa = 4.31GEE197 pKa = 4.41LEE199 pKa = 4.23FEE201 pKa = 4.41RR202 pKa = 11.84PPFKK206 pKa = 10.74YY207 pKa = 10.42ALLEE211 pKa = 4.29KK212 pKa = 10.5YY213 pKa = 10.15AVEE216 pKa = 4.44TGCCDD221 pKa = 3.63PLLLLGDD228 pKa = 4.06YY229 pKa = 9.36LTFAEE234 pKa = 5.4GLQSCDD240 pKa = 2.47EE241 pKa = 4.77CYY243 pKa = 10.27QEE245 pKa = 4.28QLRR248 pKa = 11.84VADD251 pKa = 3.59PAGRR255 pKa = 11.84VHH257 pKa = 5.54STRR260 pKa = 11.84HH261 pKa = 4.96EE262 pKa = 3.95AHH264 pKa = 6.4HH265 pKa = 5.97QNAKK269 pKa = 9.78GFKK272 pKa = 9.78DD273 pKa = 3.58VSNKK277 pKa = 9.57KK278 pKa = 7.05QQCVSACDD286 pKa = 3.8VVCGCLRR293 pKa = 11.84RR294 pKa = 11.84RR295 pKa = 11.84EE296 pKa = 4.3TKK298 pKa = 9.43MSRR301 pKa = 11.84DD302 pKa = 3.38DD303 pKa = 3.66RR304 pKa = 11.84FGARR308 pKa = 11.84VLQGLEE314 pKa = 3.73NLVRR318 pKa = 11.84GVTTEE323 pKa = 3.86MLSAAFLLKK332 pKa = 10.88AMLPFPITEE341 pKa = 4.29FFDD344 pKa = 4.09KK345 pKa = 10.81VVKK348 pKa = 10.06TMVEE352 pKa = 4.1AVPKK356 pKa = 8.69KK357 pKa = 9.97QGWVFRR363 pKa = 11.84GPIDD367 pKa = 3.59SGKK370 pKa = 8.59STVAAAVCGLLGGVALNVNTNRR392 pKa = 11.84DD393 pKa = 4.03RR394 pKa = 11.84LWVEE398 pKa = 3.92LGRR401 pKa = 11.84ALDD404 pKa = 3.46RR405 pKa = 11.84YY406 pKa = 8.75MVVFEE411 pKa = 4.98DD412 pKa = 3.63VKK414 pKa = 11.06GMPEE418 pKa = 3.87RR419 pKa = 11.84GHH421 pKa = 6.81PEE423 pKa = 3.81LPFGEE428 pKa = 4.77GFPNLDD434 pKa = 3.72SLRR437 pKa = 11.84EE438 pKa = 4.02CLDD441 pKa = 3.21GLFKK445 pKa = 11.11VGLEE449 pKa = 3.75RR450 pKa = 11.84KK451 pKa = 8.51HH452 pKa = 4.93QNKK455 pKa = 9.35VEE457 pKa = 4.21THH459 pKa = 5.76FPPWIVTCNQYY470 pKa = 10.53IIPEE474 pKa = 4.45TILARR479 pKa = 11.84CKK481 pKa = 10.83VLDD484 pKa = 4.07FAPGRR489 pKa = 11.84LNFKK493 pKa = 10.55QFVEE497 pKa = 4.24QKK499 pKa = 10.6GVDD502 pKa = 4.0LRR504 pKa = 11.84FMASGEE510 pKa = 4.24CLLLIYY516 pKa = 10.75CMFGDD521 pKa = 3.93LTLFQGEE528 pKa = 4.22QAVALSKK535 pKa = 10.65QVSDD539 pKa = 4.23EE540 pKa = 4.12AALLPWGLASEE551 pKa = 4.73GADD554 pKa = 3.51TQDD557 pKa = 4.79EE558 pKa = 4.32EE559 pKa = 5.02SQDD562 pKa = 3.7STLSTIPVEE571 pKa = 4.44CAPPSPGLRR580 pKa = 11.84LEE582 pKa = 4.31VRR584 pKa = 11.84GPPHH588 pKa = 5.54IRR590 pKa = 11.84VRR592 pKa = 11.84VRR594 pKa = 11.84VSEE597 pKa = 4.16PPAYY601 pKa = 9.62RR602 pKa = 11.84DD603 pKa = 3.47PPPYY607 pKa = 9.93PGPTGLQDD615 pKa = 3.64LCSTAFTDD623 pKa = 4.81DD624 pKa = 4.14PEE626 pKa = 5.26HH627 pKa = 6.65LFSPGPPPFSPPDD640 pKa = 3.77PGMHH644 pKa = 6.14QGDD647 pKa = 4.62SEE649 pKa = 4.66PEE651 pKa = 3.88SSPCEE656 pKa = 3.68MVSIAEE662 pKa = 4.01YY663 pKa = 10.4KK664 pKa = 9.74RR665 pKa = 11.84RR666 pKa = 11.84HH667 pKa = 5.95NIGSDD672 pKa = 3.17GLPNKK677 pKa = 9.81RR678 pKa = 11.84RR679 pKa = 11.84RR680 pKa = 11.84CLFVDD685 pKa = 5.81DD686 pKa = 5.04EE687 pKa = 4.62AQCTDD692 pKa = 3.82DD693 pKa = 3.61EE694 pKa = 4.89SEE696 pKa = 4.18EE697 pKa = 4.13EE698 pKa = 4.21EE699 pKa = 4.4EE700 pKa = 4.54EE701 pKa = 4.61EE702 pKa = 4.63EE703 pKa = 5.5DD704 pKa = 3.93EE705 pKa = 5.66QPSCSQRR712 pKa = 11.84PTTPVTPARR721 pKa = 11.84THH723 pKa = 5.29QRR725 pKa = 11.84PITDD729 pKa = 4.55FLRR732 pKa = 11.84QPLHH736 pKa = 6.75PEE738 pKa = 4.24GSKK741 pKa = 10.84CPYY744 pKa = 9.9KK745 pKa = 10.75DD746 pKa = 3.09AGCFFDD752 pKa = 4.69HH753 pKa = 7.48PVRR756 pKa = 11.84PWCDD760 pKa = 2.47RR761 pKa = 11.84CLRR764 pKa = 11.84DD765 pKa = 2.94WVTPEE770 pKa = 3.6KK771 pKa = 10.65VPRR774 pKa = 11.84PGTPTPPSVV783 pKa = 3.03

Molecular weight: 88.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1C950|A0A0A1C950_9POLY VP2 OS=Black sea bass polyomavirus 1 OX=1572341 GN=VP2 PE=4 SV=1
MM1 pKa = 7.59SEE3 pKa = 3.81QSNSFEE9 pKa = 3.97PRR11 pKa = 11.84LRR13 pKa = 11.84RR14 pKa = 11.84ALGEE18 pKa = 4.04HH19 pKa = 5.93NNPRR23 pKa = 11.84KK24 pKa = 9.72SVRR27 pKa = 11.84EE28 pKa = 3.87CWEE31 pKa = 3.61SWKK34 pKa = 10.94AEE36 pKa = 4.07QQKK39 pKa = 10.33KK40 pKa = 9.87PSLSEE45 pKa = 3.58EE46 pKa = 3.74DD47 pKa = 3.17RR48 pKa = 11.84GYY50 pKa = 10.83GDD52 pKa = 4.56SMVTLYY58 pKa = 10.35EE59 pKa = 3.86QYY61 pKa = 9.63TQVEE65 pKa = 4.51SALEE69 pKa = 4.1SFSASQTPEE78 pKa = 3.77KK79 pKa = 10.55VSPVQFDD86 pKa = 3.48EE87 pKa = 4.13PLRR90 pKa = 11.84EE91 pKa = 4.09FLCSYY96 pKa = 11.01AGFGHH101 pKa = 6.77SYY103 pKa = 10.98ILMCGEE109 pKa = 4.73EE110 pKa = 4.06KK111 pKa = 10.03WKK113 pKa = 10.45LYY115 pKa = 10.13QRR117 pKa = 11.84ILFTYY122 pKa = 7.9RR123 pKa = 11.84TEE125 pKa = 5.21DD126 pKa = 3.35RR127 pKa = 11.84FCLSRR132 pKa = 11.84PTPKK136 pKa = 9.79GTVYY140 pKa = 10.8YY141 pKa = 10.09ISIKK145 pKa = 8.07TRR147 pKa = 11.84YY148 pKa = 9.3RR149 pKa = 11.84IGGDD153 pKa = 3.63VVWNKK158 pKa = 9.67CRR160 pKa = 11.84AIGADD165 pKa = 3.09SWFEE169 pKa = 3.71LSAVKK174 pKa = 10.23VKK176 pKa = 10.45KK177 pKa = 9.88YY178 pKa = 9.99QQLKK182 pKa = 9.68ACAFGLGGVEE192 pKa = 3.68ITEE195 pKa = 4.31GEE197 pKa = 4.41LEE199 pKa = 4.23FEE201 pKa = 4.41RR202 pKa = 11.84PPFKK206 pKa = 10.74YY207 pKa = 10.42ALLEE211 pKa = 4.29KK212 pKa = 10.5YY213 pKa = 10.15AVEE216 pKa = 4.44TGCCDD221 pKa = 3.63PLLLLGDD228 pKa = 4.06YY229 pKa = 9.36LTFAEE234 pKa = 5.4GLQSCDD240 pKa = 2.47EE241 pKa = 4.77CYY243 pKa = 10.27QEE245 pKa = 4.28QLRR248 pKa = 11.84VADD251 pKa = 3.59PAGRR255 pKa = 11.84VHH257 pKa = 5.54STRR260 pKa = 11.84HH261 pKa = 4.96EE262 pKa = 3.95AHH264 pKa = 6.4HH265 pKa = 5.97QNAKK269 pKa = 9.78GFKK272 pKa = 9.78DD273 pKa = 3.58VSNKK277 pKa = 9.57KK278 pKa = 7.05QQCVSACDD286 pKa = 3.8VVCGCLRR293 pKa = 11.84RR294 pKa = 11.84RR295 pKa = 11.84EE296 pKa = 4.3TKK298 pKa = 9.43MSRR301 pKa = 11.84DD302 pKa = 3.38DD303 pKa = 3.66RR304 pKa = 11.84FGARR308 pKa = 11.84VLQGLEE314 pKa = 3.73NLVRR318 pKa = 11.84GVTTEE323 pKa = 3.86MLSAAFLLKK332 pKa = 10.88AMLPFPITEE341 pKa = 4.29FFDD344 pKa = 4.09KK345 pKa = 10.81VVKK348 pKa = 10.06TMVEE352 pKa = 4.1AVPKK356 pKa = 8.69KK357 pKa = 9.97QGWVFRR363 pKa = 11.84GPIDD367 pKa = 3.59SGKK370 pKa = 8.59STVAAAVCGLLGGVALNVNTNRR392 pKa = 11.84DD393 pKa = 4.03RR394 pKa = 11.84LWVEE398 pKa = 3.92LGRR401 pKa = 11.84ALDD404 pKa = 3.46RR405 pKa = 11.84YY406 pKa = 8.75MVVFEE411 pKa = 4.98DD412 pKa = 3.63VKK414 pKa = 11.06GMPEE418 pKa = 3.87RR419 pKa = 11.84GHH421 pKa = 6.81PEE423 pKa = 3.81LPFGEE428 pKa = 4.77GFPNLDD434 pKa = 3.72SLRR437 pKa = 11.84EE438 pKa = 4.02CLDD441 pKa = 3.21GLFKK445 pKa = 11.11VGLEE449 pKa = 3.75RR450 pKa = 11.84KK451 pKa = 8.51HH452 pKa = 4.93QNKK455 pKa = 9.35VEE457 pKa = 4.21THH459 pKa = 5.76FPPWIVTCNQYY470 pKa = 10.53IIPEE474 pKa = 4.45TILARR479 pKa = 11.84CKK481 pKa = 10.83VLDD484 pKa = 4.07FAPGRR489 pKa = 11.84LNFKK493 pKa = 10.55QFVEE497 pKa = 4.24QKK499 pKa = 10.6GVDD502 pKa = 4.0LRR504 pKa = 11.84FMASGEE510 pKa = 4.24CLLLIYY516 pKa = 10.75CMFGDD521 pKa = 3.93LTLFQGEE528 pKa = 4.22QAVALSKK535 pKa = 10.65QVSDD539 pKa = 4.23EE540 pKa = 4.12AALLPWGLASEE551 pKa = 4.73GADD554 pKa = 3.51TQDD557 pKa = 4.79EE558 pKa = 4.32EE559 pKa = 5.02SQDD562 pKa = 3.7STLSTIPVEE571 pKa = 4.44CAPPSPGLRR580 pKa = 11.84LEE582 pKa = 4.31LSLMILNIFFLLVPPLFLLLILACIRR608 pKa = 11.84ATLNLSRR615 pKa = 11.84HH616 pKa = 4.99PVRR619 pKa = 11.84WSPSQSTSAAIILGQMVYY637 pKa = 9.68PINVGVVSSWMTRR650 pKa = 11.84HH651 pKa = 5.95SAPMMRR657 pKa = 11.84ARR659 pKa = 11.84RR660 pKa = 11.84KK661 pKa = 8.29RR662 pKa = 11.84RR663 pKa = 11.84RR664 pKa = 11.84RR665 pKa = 11.84RR666 pKa = 11.84TSNPVVPSVPPPQSPLPGPTNVLSRR691 pKa = 11.84IFSVSLSTLKK701 pKa = 10.85GPSVLIRR708 pKa = 11.84TRR710 pKa = 11.84AASLTTPP717 pKa = 3.89

Molecular weight: 80.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

2889

353

783

577.8

64.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.784 ± 1.347

2.25 ± 0.611

5.365 ± 0.671

7.58 ± 0.624

4.05 ± 0.432

7.823 ± 0.548

1.904 ± 0.253

3.15 ± 0.248

5.85 ± 0.304

7.996 ± 0.874

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.492 ± 0.355

2.873 ± 0.451

7.061 ± 0.764

4.361 ± 0.158

6.3 ± 0.771

7.2 ± 0.57

5.123 ± 0.292

7.13 ± 0.158

1.869 ± 0.186

2.838 ± 0.088
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski