Termite associated circular virus 2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus termi1

Average proteome isoelectric point is 7.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2P1E314|A0A2P1E314_9VIRU Replication-associated protein OS=Termite associated circular virus 2 OX=2108550 PE=3 SV=1
MM1 pKa = 7.68PAFVCNARR9 pKa = 11.84YY10 pKa = 8.98FLITFAQCDD19 pKa = 3.98ALDD22 pKa = 3.64PWAVSNHH29 pKa = 5.43FSTLGAEE36 pKa = 4.41CIVARR41 pKa = 11.84EE42 pKa = 4.04SHH44 pKa = 6.74ADD46 pKa = 3.43GGTHH50 pKa = 6.29LHH52 pKa = 6.48AFVDD56 pKa = 4.82FGRR59 pKa = 11.84KK60 pKa = 8.13FRR62 pKa = 11.84SRR64 pKa = 11.84RR65 pKa = 11.84PGIFDD70 pKa = 3.79VAGCHH75 pKa = 6.08PNISPSRR82 pKa = 11.84GSPGAGYY89 pKa = 10.44DD90 pKa = 3.6YY91 pKa = 10.27ATKK94 pKa = 10.77DD95 pKa = 3.21GDD97 pKa = 3.74IVAGGLARR105 pKa = 11.84PSVDD109 pKa = 3.37AGDD112 pKa = 3.93GKK114 pKa = 10.78VDD116 pKa = 3.15KK117 pKa = 10.01WSQIISAEE125 pKa = 4.12DD126 pKa = 3.37EE127 pKa = 4.1RR128 pKa = 11.84TFWDD132 pKa = 4.0LLEE135 pKa = 4.58SLDD138 pKa = 4.22PKK140 pKa = 11.14ALATNYY146 pKa = 10.69GNLRR150 pKa = 11.84KK151 pKa = 9.87YY152 pKa = 11.13ADD154 pKa = 3.56FRR156 pKa = 11.84YY157 pKa = 9.91KK158 pKa = 10.54PEE160 pKa = 4.73PEE162 pKa = 4.56TYY164 pKa = 9.31QHH166 pKa = 6.8PAGIEE171 pKa = 3.85FGGGVLPDD179 pKa = 3.47LVAWRR184 pKa = 11.84DD185 pKa = 3.49SSLGASLGGRR195 pKa = 11.84RR196 pKa = 11.84NTSSARR202 pKa = 11.84GPPGALRR209 pKa = 11.84VYY211 pKa = 11.5AMLTSLGRR219 pKa = 11.84SRR221 pKa = 11.84SLCIYY226 pKa = 10.17GPTRR230 pKa = 11.84VGKK233 pKa = 6.01TTWARR238 pKa = 11.84SLGMHH243 pKa = 6.43VYY245 pKa = 9.93FMGMISGEE253 pKa = 3.8IAVRR257 pKa = 11.84DD258 pKa = 3.99MPTAEE263 pKa = 3.99YY264 pKa = 10.42AIFDD268 pKa = 4.19DD269 pKa = 3.8MRR271 pKa = 11.84GGIKK275 pKa = 10.07FFPAWKK281 pKa = 9.05EE282 pKa = 3.64WFGAQQVVTVKK293 pKa = 10.64KK294 pKa = 10.54LYY296 pKa = 10.2RR297 pKa = 11.84DD298 pKa = 3.48PLQINWGKK306 pKa = 8.98PCIWLSNTDD315 pKa = 3.46PRR317 pKa = 11.84TGMEE321 pKa = 4.04MEE323 pKa = 5.17DD324 pKa = 3.87IEE326 pKa = 4.4WLEE329 pKa = 4.19GNCDD333 pKa = 3.6FVFMQDD339 pKa = 4.55SIISHH344 pKa = 6.93ANTPP348 pKa = 3.53

Molecular weight: 38.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2P1E314|A0A2P1E314_9VIRU Replication-associated protein OS=Termite associated circular virus 2 OX=2108550 PE=3 SV=1
MM1 pKa = 7.65AYY3 pKa = 10.05GRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84LYY9 pKa = 10.45SSRR12 pKa = 11.84VKK14 pKa = 10.08TRR16 pKa = 11.84TGISGRR22 pKa = 11.84RR23 pKa = 11.84GRR25 pKa = 11.84YY26 pKa = 4.73STRR29 pKa = 11.84RR30 pKa = 11.84YY31 pKa = 10.21VKK33 pKa = 9.05TRR35 pKa = 11.84PLARR39 pKa = 11.84RR40 pKa = 11.84TYY42 pKa = 9.15RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84TTMSRR51 pKa = 11.84RR52 pKa = 11.84KK53 pKa = 9.23ILNISSEE60 pKa = 4.27KK61 pKa = 10.8KK62 pKa = 9.85KK63 pKa = 10.38DD64 pKa = 3.69TMLTWTNLQGSVGVEE79 pKa = 3.97TPGPAKK85 pKa = 10.26LAPPSPDD92 pKa = 3.0NLMTEE97 pKa = 4.36YY98 pKa = 10.67CVVFSPTHH106 pKa = 5.87RR107 pKa = 11.84GATFSSGSHH116 pKa = 5.28GSKK119 pKa = 10.28YY120 pKa = 10.36YY121 pKa = 10.27KK122 pKa = 9.36QLRR125 pKa = 11.84TSSLCYY131 pKa = 8.6WRR133 pKa = 11.84GIRR136 pKa = 11.84EE137 pKa = 4.28VVTLKK142 pKa = 10.17TDD144 pKa = 4.01GPGAWEE150 pKa = 3.64WRR152 pKa = 11.84RR153 pKa = 11.84ICFTMKK159 pKa = 10.9GEE161 pKa = 4.27DD162 pKa = 4.24LYY164 pKa = 11.31TGDD167 pKa = 4.86RR168 pKa = 11.84YY169 pKa = 11.32SFDD172 pKa = 4.4LGTSPVARR180 pKa = 11.84ITSDD184 pKa = 2.62GMKK187 pKa = 10.03RR188 pKa = 11.84AFFSSEE194 pKa = 3.35NALRR198 pKa = 11.84TRR200 pKa = 11.84DD201 pKa = 3.85AIFDD205 pKa = 3.77GNRR208 pKa = 11.84NVDD211 pKa = 3.1WADD214 pKa = 3.48VITAKK219 pKa = 10.46VDD221 pKa = 3.5TEE223 pKa = 5.21LITPLYY229 pKa = 9.36DD230 pKa = 2.9RR231 pKa = 11.84RR232 pKa = 11.84MLIRR236 pKa = 11.84SGNEE240 pKa = 3.17AGTVRR245 pKa = 11.84IKK247 pKa = 10.84KK248 pKa = 9.31CWHH251 pKa = 6.27AMNKK255 pKa = 8.78NLQYY259 pKa = 11.45DD260 pKa = 3.51DD261 pKa = 5.08DD262 pKa = 4.88EE263 pKa = 6.21NGEE266 pKa = 4.45SMLEE270 pKa = 3.86RR271 pKa = 11.84YY272 pKa = 9.72YY273 pKa = 10.45STEE276 pKa = 3.87GKK278 pKa = 9.54PGMGDD283 pKa = 3.45YY284 pKa = 11.08YY285 pKa = 10.43IVDD288 pKa = 4.39LFQAVVPQQNVTPTNLYY305 pKa = 10.74VNIEE309 pKa = 3.92ATAYY313 pKa = 7.14WHH315 pKa = 6.3EE316 pKa = 4.26RR317 pKa = 3.4

Molecular weight: 36.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

665

317

348

332.5

37.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.368 ± 1.301

1.654 ± 0.255

6.466 ± 0.511

4.511 ± 0.143

3.91 ± 0.899

9.023 ± 0.942

1.805 ± 0.352

4.662 ± 0.364

4.511 ± 0.552

6.466 ± 0.102

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.008 ± 0.095

3.459 ± 0.417

5.113 ± 0.657

1.955 ± 0.04

9.173 ± 1.621

7.218 ± 0.229

7.068 ± 1.555

5.414 ± 0.172

2.556 ± 0.226

4.662 ± 0.864
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski