Olsenella scatoligenes

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Tractidigestivibacter

Average proteome isoelectric point is 5.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2032 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A100YW27|A0A100YW27_9ACTN Aconitate hydratase OS=Olsenella scatoligenes OX=1299998 GN=acnA PE=3 SV=1
MM1 pKa = 7.32TGALGLAACGSSTTASSSSTTSSSADD27 pKa = 3.09ASSASTTSFDD37 pKa = 3.72GNFVLGFDD45 pKa = 4.5QDD47 pKa = 4.02FPPYY51 pKa = 10.44GYY53 pKa = 10.59VGNDD57 pKa = 3.14GSYY60 pKa = 9.83TGFDD64 pKa = 3.13IDD66 pKa = 5.22LAQAVCDD73 pKa = 3.83RR74 pKa = 11.84EE75 pKa = 4.39GWTLVPTPISWDD87 pKa = 3.51AKK89 pKa = 9.86DD90 pKa = 3.41TLLNSGQITCIWNGFTIEE108 pKa = 3.95GRR110 pKa = 11.84EE111 pKa = 4.03DD112 pKa = 3.79GYY114 pKa = 11.68AFTDD118 pKa = 4.03PYY120 pKa = 10.24MEE122 pKa = 4.12NRR124 pKa = 11.84QVVVVPASSDD134 pKa = 3.56VQQLSDD140 pKa = 3.64LAGKK144 pKa = 9.69NVITQADD151 pKa = 3.94SAALDD156 pKa = 3.67VLSEE160 pKa = 4.36GGSQEE165 pKa = 3.99EE166 pKa = 4.33LGKK169 pKa = 10.85SFGNLQTIDD178 pKa = 3.62NYY180 pKa = 9.73NTAFMMLEE188 pKa = 4.14SGQVDD193 pKa = 5.29AIAIDD198 pKa = 3.77YY199 pKa = 8.6PVAVFNIGDD208 pKa = 3.64KK209 pKa = 10.19TSEE212 pKa = 4.02FRR214 pKa = 11.84ILDD217 pKa = 3.54EE218 pKa = 4.52NLNSEE223 pKa = 4.22HH224 pKa = 6.71FGVGFANTDD233 pKa = 3.75DD234 pKa = 4.17GAQLAKK240 pKa = 9.9TVEE243 pKa = 4.26ADD245 pKa = 3.73LQVLDD250 pKa = 4.16SEE252 pKa = 4.94GTVKK256 pKa = 10.27EE257 pKa = 4.12LCEE260 pKa = 4.2KK261 pKa = 10.79YY262 pKa = 10.55ADD264 pKa = 3.66QGVSYY269 pKa = 10.5DD270 pKa = 3.82LWCLPKK276 pKa = 10.66AA277 pKa = 4.01

Molecular weight: 29.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A100YWD7|A0A100YWD7_9ACTN Two-component system response regulator OS=Olsenella scatoligenes OX=1299998 GN=AUL39_00770 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.62RR10 pKa = 11.84KK11 pKa = 9.56RR12 pKa = 11.84AKK14 pKa = 8.76THH16 pKa = 5.23GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.36GGRR28 pKa = 11.84KK29 pKa = 8.76VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.12GRR39 pKa = 11.84KK40 pKa = 8.12QLTVV44 pKa = 2.97

Molecular weight: 5.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2032

0

2032

684394

37

2041

336.8

36.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.136 ± 0.077

1.533 ± 0.026

6.451 ± 0.048

6.439 ± 0.05

3.418 ± 0.031

8.388 ± 0.051

1.989 ± 0.023

4.724 ± 0.047

3.568 ± 0.048

9.105 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.592 ± 0.027

2.882 ± 0.028

4.343 ± 0.034

2.931 ± 0.026

6.165 ± 0.058

6.235 ± 0.057

5.688 ± 0.055

8.421 ± 0.048

1.124 ± 0.019

2.87 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski