Beihai mantis shrimp virus 2

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KJI5|A0A1L3KJI5_9VIRU Uncharacterized protein OS=Beihai mantis shrimp virus 2 OX=1922429 PE=4 SV=1
MM1 pKa = 7.72DD2 pKa = 5.36VIHH5 pKa = 6.03THH7 pKa = 4.59SAKK10 pKa = 10.12PVRR13 pKa = 11.84AVTFNNSQATPVRR26 pKa = 11.84VLNMPDD32 pKa = 2.72ITTLQSEE39 pKa = 3.98IDD41 pKa = 3.64YY42 pKa = 10.9LKK44 pKa = 10.75RR45 pKa = 11.84QILALQGDD53 pKa = 4.87FSQISSINEE62 pKa = 3.31ILAQGLATQKK72 pKa = 11.18AFLQRR77 pKa = 11.84LSNLAATARR86 pKa = 11.84NNSFTNTNQINQASAIPPGDD106 pKa = 3.59STLGKK111 pKa = 9.35PSAISLVYY119 pKa = 10.02FLLHH123 pKa = 6.7SMGSSDD129 pKa = 3.78IKK131 pKa = 10.96LSSTEE136 pKa = 3.59IKK138 pKa = 10.91NFLSQDD144 pKa = 3.28LNLCKK149 pKa = 9.64FTNEE153 pKa = 3.81IFSFGPEE160 pKa = 3.8ITPKK164 pKa = 10.45AIEE167 pKa = 4.21FTVPEE172 pKa = 4.12PTLEE176 pKa = 4.18EE177 pKa = 4.21IYY179 pKa = 10.64LVSIEE184 pKa = 4.62PGKK187 pKa = 10.47DD188 pKa = 3.23DD189 pKa = 4.42QSVVLYY195 pKa = 9.98KK196 pKa = 10.21FNIISNTWEE205 pKa = 4.11TEE207 pKa = 4.05VLGTCAIDD215 pKa = 3.62FSNFSVTNTQGILQCAYY232 pKa = 9.11GQFVATSTSNVDD244 pKa = 4.06LYY246 pKa = 11.43SQNALLNYY254 pKa = 8.11TFVRR258 pKa = 11.84ALEE261 pKa = 4.42SYY263 pKa = 9.58TLLLEE268 pKa = 4.14EE269 pKa = 5.56LIEE272 pKa = 4.42SALSSVSQTKK282 pKa = 10.34LNPIVEE288 pKa = 4.17EE289 pKa = 3.85ALRR292 pKa = 11.84IEE294 pKa = 4.0WLLLQFQEE302 pKa = 5.17SLLSMQANGIFYY314 pKa = 10.78VEE316 pKa = 4.27STSDD320 pKa = 3.61YY321 pKa = 10.02VSEE324 pKa = 4.51INFSDD329 pKa = 3.54VTKK332 pKa = 10.23PLSTVSCQSSINYY345 pKa = 9.61SVTPEE350 pKa = 4.41GYY352 pKa = 9.3VGSVSAEE359 pKa = 3.7PAFEE363 pKa = 4.52PEE365 pKa = 4.03QQEE368 pKa = 4.94GYY370 pKa = 10.92SDD372 pKa = 3.66IKK374 pKa = 11.33NLDD377 pKa = 3.74DD378 pKa = 4.72FLLTVTTHH386 pKa = 6.52SEE388 pKa = 4.44LEE390 pKa = 3.75FHH392 pKa = 7.01EE393 pKa = 4.99YY394 pKa = 9.44IVHH397 pKa = 6.79EE398 pKa = 4.29DD399 pKa = 3.3HH400 pKa = 7.87DD401 pKa = 4.08VLEE404 pKa = 5.6DD405 pKa = 3.64YY406 pKa = 11.3RR407 pKa = 11.84KK408 pKa = 8.35MTVSQEE414 pKa = 3.92KK415 pKa = 10.13PNLHH419 pKa = 6.88HH420 pKa = 6.74YY421 pKa = 10.84VDD423 pKa = 3.99IKK425 pKa = 10.88ISGSSFPGMEE435 pKa = 4.36VDD437 pKa = 4.06VQPCTVDD444 pKa = 3.14RR445 pKa = 11.84DD446 pKa = 3.68GDD448 pKa = 3.57ISQVSFDD455 pKa = 3.49TTYY458 pKa = 11.33NADD461 pKa = 2.99GSYY464 pKa = 10.36QAVASVWVGARR475 pKa = 11.84GLFYY479 pKa = 10.47KK480 pKa = 10.86YY481 pKa = 10.25EE482 pKa = 4.17VDD484 pKa = 3.97GKK486 pKa = 8.36TSQSGRR492 pKa = 11.84YY493 pKa = 8.79KK494 pKa = 9.87EE495 pKa = 4.23NKK497 pKa = 8.71VLSEE501 pKa = 4.09NEE503 pKa = 3.63QVEE506 pKa = 4.59IVTTASLEE514 pKa = 4.0GDD516 pKa = 4.78KK517 pKa = 10.4IDD519 pKa = 4.49CAQKK523 pKa = 8.59IHH525 pKa = 6.91GYY527 pKa = 10.07ALEE530 pKa = 4.34FNSFNSVVKK539 pKa = 10.54ISGFKK544 pKa = 10.01VRR546 pKa = 11.84YY547 pKa = 6.5PKK549 pKa = 10.54PPVFSFVPSFDD560 pKa = 3.59KK561 pKa = 11.19QQTEE565 pKa = 3.92LMAITFKK572 pKa = 10.13NTYY575 pKa = 9.6EE576 pKa = 4.35SIKK579 pKa = 10.05LTAEE583 pKa = 4.08YY584 pKa = 9.52EE585 pKa = 4.19QLSARR590 pKa = 11.84LEE592 pKa = 4.13ALGKK596 pKa = 9.83ICSPTLLGAFGGLFGTASNFAKK618 pKa = 10.25SVKK621 pKa = 9.76AACTLQKK628 pKa = 10.34LASGFYY634 pKa = 10.43GLEE637 pKa = 3.69EE638 pKa = 4.24LVQGRR643 pKa = 11.84YY644 pKa = 9.12IGAILGFAGASTASLTNKK662 pKa = 9.93LVRR665 pKa = 11.84KK666 pKa = 10.12GSFEE670 pKa = 4.31NKK672 pKa = 9.63DD673 pKa = 3.48DD674 pKa = 5.65LIGHH678 pKa = 5.33VAKK681 pKa = 10.04TIRR684 pKa = 11.84FSKK687 pKa = 10.39YY688 pKa = 9.89LPEE691 pKa = 4.27LNKK694 pKa = 10.4RR695 pKa = 11.84KK696 pKa = 9.97KK697 pKa = 10.28NYY699 pKa = 9.84SNSPFEE705 pKa = 4.3TMSTSDD711 pKa = 3.29NFIAKK716 pKa = 8.9MGAPINQLPGSEE728 pKa = 4.86FITNAFLNVTPEE740 pKa = 3.99DD741 pKa = 3.59KK742 pKa = 10.55SYY744 pKa = 11.09KK745 pKa = 9.9RR746 pKa = 11.84IMKK749 pKa = 9.88IKK751 pKa = 9.09EE752 pKa = 3.64DD753 pKa = 4.27GYY755 pKa = 10.9FPEE758 pKa = 4.6HH759 pKa = 6.53QSIFTNTMFTVGPDD773 pKa = 2.91VDD775 pKa = 4.0TEE777 pKa = 4.28EE778 pKa = 4.9LFVMQCRR785 pKa = 11.84YY786 pKa = 10.11GISDD790 pKa = 3.53GAVNRR795 pKa = 11.84IHH797 pKa = 6.93SFNTGGSSAKK807 pKa = 9.15TVAGPGSSFLIKK819 pKa = 10.06KK820 pKa = 10.22DD821 pKa = 3.37GEE823 pKa = 4.33TSVPYY828 pKa = 10.6LINGKK833 pKa = 8.39IEE835 pKa = 4.13KK836 pKa = 9.12MALLAMDD843 pKa = 5.76GYY845 pKa = 11.21DD846 pKa = 3.03PSLFTEE852 pKa = 4.53EE853 pKa = 4.61MSDD856 pKa = 3.41TDD858 pKa = 5.84LEE860 pKa = 4.83SIDD863 pKa = 4.11NRR865 pKa = 11.84TNMEE869 pKa = 3.76IALSIDD875 pKa = 3.07KK876 pKa = 10.74KK877 pKa = 9.89MKK879 pKa = 9.83FYY881 pKa = 10.53NSRR884 pKa = 11.84VIEE887 pKa = 4.13SSPFQSTPEE896 pKa = 3.91ANRR899 pKa = 11.84DD900 pKa = 3.41ALASLMSGSLFKK912 pKa = 10.93DD913 pKa = 3.94FNYY916 pKa = 10.49SIPNRR921 pKa = 11.84TCQPFADD928 pKa = 3.32ALYY931 pKa = 10.65NNMLKK936 pKa = 10.13SEE938 pKa = 4.08QAPILGGFDD947 pKa = 3.3FNSRR951 pKa = 11.84HH952 pKa = 6.24RR953 pKa = 11.84LTLEE957 pKa = 3.71PMSYY961 pKa = 11.5ADD963 pKa = 6.06LDD965 pKa = 4.1DD966 pKa = 6.55LMLQTYY972 pKa = 10.21RR973 pKa = 11.84GILSFDD979 pKa = 2.88IFVINNII986 pKa = 3.91

Molecular weight: 109.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KJJ1|A0A1L3KJJ1_9VIRU Uncharacterized protein OS=Beihai mantis shrimp virus 2 OX=1922429 PE=4 SV=1
MM1 pKa = 7.67SSTNAYY7 pKa = 9.64VLNLRR12 pKa = 11.84AKK14 pKa = 9.51DD15 pKa = 3.48AKK17 pKa = 11.04LEE19 pKa = 4.06IVKK22 pKa = 10.3DD23 pKa = 3.65FTMVPGRR30 pKa = 11.84DD31 pKa = 3.78PLEE34 pKa = 4.46HH35 pKa = 6.57RR36 pKa = 11.84CKK38 pKa = 10.4ATICVKK44 pKa = 10.3GKK46 pKa = 9.81HH47 pKa = 5.33FEE49 pKa = 4.38VVQSAQSKK57 pKa = 8.31KK58 pKa = 10.36AAYY61 pKa = 8.18EE62 pKa = 3.93KK63 pKa = 10.91AAGEE67 pKa = 4.4LLQLWPYY74 pKa = 10.11VEE76 pKa = 4.69EE77 pKa = 4.24VLNEE81 pKa = 3.87QLNEE85 pKa = 4.09EE86 pKa = 4.65EE87 pKa = 4.76LTVLDD92 pKa = 3.76INVVKK97 pKa = 9.04TNKK100 pKa = 8.99MFSVYY105 pKa = 10.16RR106 pKa = 11.84GSTQKK111 pKa = 10.55NFKK114 pKa = 10.07KK115 pKa = 10.63KK116 pKa = 10.36SDD118 pKa = 3.48LLTYY122 pKa = 10.59LEE124 pKa = 5.08NILL127 pKa = 4.55

Molecular weight: 14.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3860

127

2185

772.0

86.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.658 ± 0.248

1.58 ± 0.374

5.984 ± 0.287

6.088 ± 0.375

5.855 ± 0.331

4.948 ± 0.451

2.021 ± 0.251

5.881 ± 0.329

6.917 ± 0.59

9.145 ± 0.36

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.684 ± 0.24

5.648 ± 0.511

5.181 ± 0.49

3.497 ± 0.282

3.886 ± 0.586

7.124 ± 1.259

6.969 ± 1.001

6.477 ± 0.465

0.622 ± 0.13

3.834 ± 0.255
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski