Weissella ceti

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella

Average proteome isoelectric point is 5.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1338 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A075TZF1|A0A075TZF1_9LACO Addiction module antitoxin RelB/DinJ family OS=Weissella ceti OX=759620 GN=WS74_0743 PE=3 SV=1
MM1 pKa = 7.61ASFGEE6 pKa = 4.19RR7 pKa = 11.84MLNEE11 pKa = 4.04LALGQVDD18 pKa = 3.81EE19 pKa = 4.83AKK21 pKa = 10.62KK22 pKa = 10.8SFASALRR29 pKa = 11.84HH30 pKa = 6.77DD31 pKa = 5.55DD32 pKa = 4.03DD33 pKa = 3.97DD34 pKa = 4.66TIYY37 pKa = 11.32SLAEE41 pKa = 3.53EE42 pKa = 5.18LYY44 pKa = 10.96ALGMSNQAKK53 pKa = 9.72RR54 pKa = 11.84AYY56 pKa = 9.08EE57 pKa = 3.99KK58 pKa = 10.94LLEE61 pKa = 4.57RR62 pKa = 11.84YY63 pKa = 9.11PDD65 pKa = 3.54EE66 pKa = 4.75DD67 pKa = 3.47QLRR70 pKa = 11.84TALADD75 pKa = 3.37IAIDD79 pKa = 4.73EE80 pKa = 5.33DD81 pKa = 3.98DD82 pKa = 3.62TDD84 pKa = 3.73AAMGYY89 pKa = 10.0LADD92 pKa = 5.07IKK94 pKa = 9.69PTSNAYY100 pKa = 10.36LEE102 pKa = 4.43SLLVLADD109 pKa = 4.59LYY111 pKa = 11.1QSEE114 pKa = 4.37GLYY117 pKa = 10.54EE118 pKa = 3.99PAEE121 pKa = 4.28AKK123 pKa = 10.62LLEE126 pKa = 4.2AHH128 pKa = 6.41NLAPEE133 pKa = 3.89EE134 pKa = 3.97AVIGFALAEE143 pKa = 4.26YY144 pKa = 9.84YY145 pKa = 10.11FASAKK150 pKa = 8.85YY151 pKa = 9.72QEE153 pKa = 5.11AIPYY157 pKa = 9.28YY158 pKa = 10.39RR159 pKa = 11.84EE160 pKa = 3.78LLKK163 pKa = 11.24AGDD166 pKa = 4.28RR167 pKa = 11.84YY168 pKa = 10.73FSGTDD173 pKa = 3.02VASRR177 pKa = 11.84IGVAYY182 pKa = 10.28ALVGDD187 pKa = 4.06VTNALAYY194 pKa = 10.49LEE196 pKa = 4.28QIKK199 pKa = 7.65TTEE202 pKa = 3.96LTPDD206 pKa = 2.88VRR208 pKa = 11.84FQLGMLYY215 pKa = 10.44AADD218 pKa = 4.2EE219 pKa = 4.33EE220 pKa = 4.84THH222 pKa = 6.12QKK224 pKa = 10.91AIDD227 pKa = 3.65TFEE230 pKa = 3.96EE231 pKa = 4.21LMEE234 pKa = 5.96IDD236 pKa = 4.01ASYY239 pKa = 9.04ATLYY243 pKa = 10.52EE244 pKa = 4.07PLGNLYY250 pKa = 10.17EE251 pKa = 4.52HH252 pKa = 7.03AQQDD256 pKa = 3.58EE257 pKa = 4.49DD258 pKa = 4.73ALRR261 pKa = 11.84TYY263 pKa = 10.47QAGLAVDD270 pKa = 3.5QFNTKK275 pKa = 9.83LVEE278 pKa = 3.89RR279 pKa = 11.84AAILSEE285 pKa = 3.87RR286 pKa = 11.84LGSSEE291 pKa = 4.76QAEE294 pKa = 4.11QLYY297 pKa = 10.47KK298 pKa = 10.8EE299 pKa = 4.43GLRR302 pKa = 11.84NNPGDD307 pKa = 3.61PTLVLDD313 pKa = 3.88YY314 pKa = 11.25SDD316 pKa = 3.78WLVLQNKK323 pKa = 8.26YY324 pKa = 10.98AEE326 pKa = 4.85NIALLNDD333 pKa = 3.44YY334 pKa = 10.58LADD337 pKa = 4.64DD338 pKa = 4.69EE339 pKa = 6.19ADD341 pKa = 3.42IDD343 pKa = 3.94PVIYY347 pKa = 10.48RR348 pKa = 11.84NLAQSYY354 pKa = 7.64TALEE358 pKa = 4.7DD359 pKa = 3.67YY360 pKa = 11.3EE361 pKa = 4.61MATQYY366 pKa = 9.18WQAAVPLFIDD376 pKa = 3.81DD377 pKa = 4.52ANFLRR382 pKa = 11.84EE383 pKa = 3.6AFFYY387 pKa = 10.66FRR389 pKa = 11.84EE390 pKa = 4.23NGNQEE395 pKa = 4.1LALEE399 pKa = 4.19TLTRR403 pKa = 11.84YY404 pKa = 9.94VEE406 pKa = 4.21LVPTDD411 pKa = 4.2LEE413 pKa = 4.18MSEE416 pKa = 4.29TLAALADD423 pKa = 3.52TDD425 pKa = 4.16YY426 pKa = 11.97

Molecular weight: 48.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A075TXN0|A0A075TXN0_9LACO Uncharacterized protein OS=Weissella ceti OX=759620 GN=WS74_0148 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.69QPKK8 pKa = 8.34KK9 pKa = 7.47RR10 pKa = 11.84HH11 pKa = 5.71RR12 pKa = 11.84EE13 pKa = 3.7RR14 pKa = 11.84VHH16 pKa = 6.23GFRR19 pKa = 11.84KK20 pKa = 10.04RR21 pKa = 11.84MSTSNGRR28 pKa = 11.84KK29 pKa = 8.01VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.39GRR39 pKa = 11.84KK40 pKa = 8.52VLSAA44 pKa = 4.05

Molecular weight: 5.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1338

0

1338

398033

29

1673

297.5

33.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.893 ± 0.095

0.2 ± 0.012

6.208 ± 0.066

6.564 ± 0.096

4.129 ± 0.049

6.926 ± 0.069

1.858 ± 0.033

6.616 ± 0.061

5.487 ± 0.094

9.504 ± 0.082

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.232 ± 0.038

4.463 ± 0.045

3.703 ± 0.062

4.314 ± 0.062

4.219 ± 0.049

5.232 ± 0.054

6.38 ± 0.054

7.759 ± 0.052

1.079 ± 0.026

3.232 ± 0.041
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski