Circovirus-like genome DCCV-5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A190WHA9|A0A190WHA9_9CIRC Uncharacterized protein OS=Circovirus-like genome DCCV-5 OX=1788445 PE=4 SV=1
MM1 pKa = 6.7TTQLLTPGSTHH12 pKa = 6.42SGHH15 pKa = 6.84SIALPVGRR23 pKa = 11.84SPLVPEE29 pKa = 4.06HH30 pKa = 5.54LTYY33 pKa = 10.62RR34 pKa = 11.84DD35 pKa = 3.73TPSTLIRR42 pKa = 11.84SPSPPLDD49 pKa = 4.47DD50 pKa = 4.53YY51 pKa = 11.74LWDD54 pKa = 4.09VTWSPPVGPDD64 pKa = 3.43PNPEE68 pKa = 3.67LTALRR73 pKa = 11.84MAAFARR79 pKa = 11.84EE80 pKa = 4.16VSPPPMRR87 pKa = 11.84TPGTGRR93 pKa = 11.84SSVGRR98 pKa = 11.84TPVPWLRR105 pKa = 11.84RR106 pKa = 11.84ASSTRR111 pKa = 11.84FPLIYY116 pKa = 10.32TSDD119 pKa = 3.4TSEE122 pKa = 4.03TSTGSIEE129 pKa = 4.26RR130 pKa = 11.84FSRR133 pKa = 11.84PWSPSPLPAGVGSWEE148 pKa = 4.07EE149 pKa = 3.64LDD151 pKa = 3.88LVNLRR156 pKa = 11.84EE157 pKa = 4.26CDD159 pKa = 3.36QPSRR163 pKa = 3.86

Molecular weight: 17.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A190WHJ3|A0A190WHJ3_9CIRC Uncharacterized protein OS=Circovirus-like genome DCCV-5 OX=1788445 PE=4 SV=1
MM1 pKa = 7.42AAYY4 pKa = 9.41AARR7 pKa = 11.84IGYY10 pKa = 9.3GLARR14 pKa = 11.84RR15 pKa = 11.84YY16 pKa = 9.08AVPAIRR22 pKa = 11.84RR23 pKa = 11.84SIPAIQRR30 pKa = 11.84FARR33 pKa = 11.84RR34 pKa = 11.84SFVPRR39 pKa = 11.84QNGLGIPLRR48 pKa = 11.84RR49 pKa = 11.84IAPSRR54 pKa = 11.84AANFNQIRR62 pKa = 11.84RR63 pKa = 11.84MGSTAFPRR71 pKa = 11.84TPTSNPIPSTSRR83 pKa = 11.84AINRR87 pKa = 11.84IARR90 pKa = 11.84GATAAAATGGALKK103 pKa = 10.62ALSNAKK109 pKa = 9.32KK110 pKa = 10.38RR111 pKa = 11.84KK112 pKa = 9.87AEE114 pKa = 4.03EE115 pKa = 3.49QNKK118 pKa = 9.35RR119 pKa = 11.84VKK121 pKa = 10.57KK122 pKa = 10.52DD123 pKa = 3.08IEE125 pKa = 3.99QNAASGLGDD134 pKa = 4.04DD135 pKa = 4.75VKK137 pKa = 10.6TMDD140 pKa = 4.53SFTHH144 pKa = 6.63HH145 pKa = 6.88SGNDD149 pKa = 3.1SWLKK153 pKa = 9.98AHH155 pKa = 6.83LVSGKK160 pKa = 8.44HH161 pKa = 4.31TVKK164 pKa = 10.84NLAFSNNLLGTQGRR178 pKa = 11.84ARR180 pKa = 11.84WFTVTTTQTPDD191 pKa = 3.05DD192 pKa = 4.24YY193 pKa = 10.99RR194 pKa = 11.84TLFQQTTEE202 pKa = 4.2NYY204 pKa = 9.58RR205 pKa = 11.84STSTASATPSWVRR218 pKa = 11.84GDD220 pKa = 4.26PLLQSGYY227 pKa = 10.37LNQKK231 pKa = 9.38FVYY234 pKa = 9.54EE235 pKa = 4.11KK236 pKa = 10.97LKK238 pKa = 11.1ANYY241 pKa = 9.04IFKK244 pKa = 10.33NQGSSPVHH252 pKa = 5.12MEE254 pKa = 3.67YY255 pKa = 10.61FIITPKK261 pKa = 9.54DD262 pKa = 3.35TNEE265 pKa = 4.68IARR268 pKa = 11.84NWQNDD273 pKa = 3.75YY274 pKa = 11.8VNGLSDD280 pKa = 3.67STAEE284 pKa = 4.19LAVKK288 pKa = 10.47ASISSGVLVTPCEE301 pKa = 4.11YY302 pKa = 10.7KK303 pKa = 10.27IGSSPRR309 pKa = 11.84FNKK312 pKa = 9.06YY313 pKa = 7.22WKK315 pKa = 9.36ILYY318 pKa = 7.86SHH320 pKa = 7.5KK321 pKa = 10.72VRR323 pKa = 11.84MAEE326 pKa = 4.08GAEE329 pKa = 4.14HH330 pKa = 6.79EE331 pKa = 5.51FNFTDD336 pKa = 3.27NANRR340 pKa = 11.84EE341 pKa = 4.28IQWNGFPVNGGQLKK355 pKa = 10.57GMTKK359 pKa = 9.75YY360 pKa = 10.62FIVKK364 pKa = 9.72IYY366 pKa = 10.95GDD368 pKa = 3.82IGDD371 pKa = 4.24SSNLLGTIGTITTAPAKK388 pKa = 10.24IIGILRR394 pKa = 11.84HH395 pKa = 5.55TEE397 pKa = 4.13TVRR400 pKa = 11.84HH401 pKa = 4.52VHH403 pKa = 5.59RR404 pKa = 11.84TPSLFLDD411 pKa = 5.3FSADD415 pKa = 3.47LATNAAALYY424 pKa = 9.38EE425 pKa = 4.3KK426 pKa = 10.72DD427 pKa = 3.32GGTGKK432 pKa = 10.24VDD434 pKa = 3.41NVLLEE439 pKa = 4.16VQPP442 pKa = 4.25

Molecular weight: 48.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1034

148

442

258.5

29.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.544 ± 1.338

0.774 ± 0.304

4.739 ± 0.41

4.932 ± 0.64

3.385 ± 0.425

7.06 ± 0.441

2.611 ± 0.454

5.222 ± 0.888

4.739 ± 1.102

8.414 ± 0.892

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.451 ± 0.311

4.739 ± 1.12

7.06 ± 1.923

3.675 ± 1.004

8.027 ± 0.404

8.027 ± 1.221

7.35 ± 0.959

4.545 ± 0.544

2.224 ± 0.398

3.482 ± 0.557
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski