Lottiidibacillus patelloidae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lottiidibacillus

Average proteome isoelectric point is 6.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3053 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A263BT11|A0A263BT11_9BACI SelB translation factor OS=Lottiidibacillus patelloidae OX=2670334 GN=selB PE=4 SV=1
MM1 pKa = 7.2KK2 pKa = 10.4RR3 pKa = 11.84KK4 pKa = 9.08LALFLTFILLFSQSVFPLNRR24 pKa = 11.84AFSEE28 pKa = 4.36YY29 pKa = 10.74GSNQIFSNVDD39 pKa = 3.0WLPYY43 pKa = 10.54AVGEE47 pKa = 4.49GNDD50 pKa = 4.46PLDD53 pKa = 3.78QNPNSTDD60 pKa = 2.86IAGNSEE66 pKa = 4.37LPAVSYY72 pKa = 10.85SYY74 pKa = 11.51DD75 pKa = 3.16STYY78 pKa = 11.03LYY80 pKa = 11.11FKK82 pKa = 10.14MRR84 pKa = 11.84LDD86 pKa = 4.7ANPLNNKK93 pKa = 9.18NDD95 pKa = 3.62NFDD98 pKa = 3.33QYY100 pKa = 11.94AWTVLFNTDD109 pKa = 3.17GNEE112 pKa = 4.05HH113 pKa = 6.53DD114 pKa = 3.76WEE116 pKa = 4.61YY117 pKa = 10.68MVSLNGLAEE126 pKa = 4.11TVQIGKK132 pKa = 8.33NTDD135 pKa = 3.16KK136 pKa = 11.19EE137 pKa = 4.08LDD139 pKa = 3.51SWGDD143 pKa = 3.52QAEE146 pKa = 4.29DD147 pKa = 3.71WLWTGPAIDD156 pKa = 4.55YY157 pKa = 11.21ADD159 pKa = 4.65ALPIDD164 pKa = 3.98VSLSNFNNDD173 pKa = 2.57QDD175 pKa = 4.28FFAYY179 pKa = 8.83WAVPWTDD186 pKa = 4.18FAAVTGLTPTSMIQLFYY203 pKa = 10.18ATSANASNYY212 pKa = 10.07NKK214 pKa = 10.29DD215 pKa = 3.21RR216 pKa = 11.84MGGHH220 pKa = 6.3PTSFADD226 pKa = 3.49AWGEE230 pKa = 3.78PILINGTTPNPPTIEE245 pKa = 3.94IAGGDD250 pKa = 3.62TKK252 pKa = 9.12TTNDD256 pKa = 3.68NTPLISGSSSAADD269 pKa = 3.63GSFVDD274 pKa = 3.41VTLYY278 pKa = 10.95LKK280 pKa = 10.52SDD282 pKa = 3.34PTKK285 pKa = 9.78TYY287 pKa = 9.41TYY289 pKa = 8.85QTTVEE294 pKa = 3.93NGQWQTLVTTALNNGVYY311 pKa = 9.74NVSAIVEE318 pKa = 4.03EE319 pKa = 4.87DD320 pKa = 3.56GQFGIDD326 pKa = 3.69EE327 pKa = 4.44QEE329 pKa = 4.14LTVDD333 pKa = 4.25PSQIIAPEE341 pKa = 3.88ITITTPSTGSAVTDD355 pKa = 3.51STPTISGSYY364 pKa = 9.7TSGTSTNNIVVEE376 pKa = 5.17FINGNNVVATGSASLANGVWEE397 pKa = 4.33FTPNSNLPLGTYY409 pKa = 7.15QVKK412 pKa = 8.46ATITDD417 pKa = 4.58EE418 pKa = 4.05INQTSTSSIEE428 pKa = 3.95LSVAEE433 pKa = 4.48AKK435 pKa = 10.32VLNINIDD442 pKa = 3.85TINPLVTNIVTPVFTGSSNAMDD464 pKa = 3.87GVTIFVTINNTSYY477 pKa = 7.77TTTVSNSSWSVQWPEE492 pKa = 3.56ALAEE496 pKa = 4.11GTYY499 pKa = 10.36VVSASVEE506 pKa = 4.29EE507 pKa = 4.21QGQTASDD514 pKa = 4.49SINLIVDD521 pKa = 3.56TTKK524 pKa = 9.5PTLSINGGTEE534 pKa = 3.49RR535 pKa = 11.84TTNEE539 pKa = 3.87STPTISGTTDD549 pKa = 2.93APDD552 pKa = 3.4NSVVTITLNGKK563 pKa = 9.86SYY565 pKa = 7.67TTTVTDD571 pKa = 3.85GTWTVDD577 pKa = 3.17VGEE580 pKa = 4.6LTDD583 pKa = 3.71GQYY586 pKa = 11.2EE587 pKa = 4.29VTATITDD594 pKa = 3.65EE595 pKa = 4.6AGNTTTAKK603 pKa = 10.12QSLTIDD609 pKa = 3.4TTGPAIVITSPEE621 pKa = 3.61NGAILNNHH629 pKa = 5.83TPTVTGTVEE638 pKa = 3.81AGSTVLVEE646 pKa = 5.89FIDD649 pKa = 3.91VNNSVVHH656 pKa = 6.25SGHH659 pKa = 5.97ATVTNEE665 pKa = 2.96NWTYY669 pKa = 10.9TPTGNLNEE677 pKa = 4.13GTYY680 pKa = 10.13SVKK683 pKa = 10.26ATGTDD688 pKa = 3.07ALGNPKK694 pKa = 8.84STSITITIDD703 pKa = 2.93VTAPTLTINGGTEE716 pKa = 3.59RR717 pKa = 11.84TTNDD721 pKa = 2.83STPTVSGTTDD731 pKa = 3.2APNGAIVTVTVNGQSYY747 pKa = 7.83TATVTDD753 pKa = 4.2GTWTVTVDD761 pKa = 3.27EE762 pKa = 5.87LIDD765 pKa = 3.42GTYY768 pKa = 10.61EE769 pKa = 3.8VTATITDD776 pKa = 3.48EE777 pKa = 4.48AGNVSTKK784 pKa = 8.89TQTLILSTIGPEE796 pKa = 4.05LKK798 pKa = 9.69IDD800 pKa = 3.88SPEE803 pKa = 3.96EE804 pKa = 3.75GALLSNYY811 pKa = 9.64HH812 pKa = 6.72PIISGTTNGDD822 pKa = 2.94KK823 pKa = 10.11VTITIYY829 pKa = 11.52DD830 pKa = 3.71MLEE833 pKa = 4.18KK834 pKa = 9.95IIEE837 pKa = 4.3TGVAEE842 pKa = 5.1LDD844 pKa = 3.48EE845 pKa = 5.29DD846 pKa = 5.31GNWTYY851 pKa = 10.5NTVSSLSDD859 pKa = 3.07GTYY862 pKa = 9.56LAKK865 pKa = 10.63AISTFNNGNDD875 pKa = 3.5TEE877 pKa = 4.58ASVSFIIDD885 pKa = 3.14VTAPTLTIDD894 pKa = 3.69GGTEE898 pKa = 3.51RR899 pKa = 11.84TTNDD903 pKa = 3.1STPTISGTTDD913 pKa = 2.93APDD916 pKa = 3.4NSVVTITLNGKK927 pKa = 9.86SYY929 pKa = 7.67TTTVTDD935 pKa = 4.05GTWTIDD941 pKa = 3.25TDD943 pKa = 3.67EE944 pKa = 4.77LTDD947 pKa = 3.44GTYY950 pKa = 10.84EE951 pKa = 3.98VTATITDD958 pKa = 3.61EE959 pKa = 4.61AGNSATAKK967 pKa = 10.04QSLTIDD973 pKa = 3.42TTGPTIAITSPEE985 pKa = 3.93NGAVLNDD992 pKa = 3.43QTPTVTGTVEE1002 pKa = 3.86AGSTVIVEE1010 pKa = 5.91FIDD1013 pKa = 3.63EE1014 pKa = 4.32NNSVVHH1020 pKa = 6.38SGHH1023 pKa = 5.9ATVANEE1029 pKa = 3.27NWTYY1033 pKa = 10.91TPTEE1037 pKa = 3.86NLLEE1041 pKa = 4.1GTYY1044 pKa = 7.93TVKK1047 pKa = 10.32ATGTDD1052 pKa = 3.09ALGNPKK1058 pKa = 8.84STSITITIDD1067 pKa = 2.93VTAPTLTIDD1076 pKa = 3.96GGAEE1080 pKa = 3.66RR1081 pKa = 11.84TTNDD1085 pKa = 2.82STPTVSGTTDD1095 pKa = 3.04APDD1098 pKa = 3.4NSVVTITLNGKK1109 pKa = 9.86SYY1111 pKa = 7.68TTTVTNGTWTIDD1123 pKa = 3.23VDD1125 pKa = 3.85EE1126 pKa = 5.03LTDD1129 pKa = 3.39GTYY1132 pKa = 10.84EE1133 pKa = 3.98VTATITDD1140 pKa = 3.53EE1141 pKa = 4.68AGNSTTATQSLTIDD1155 pKa = 3.4TLAPEE1160 pKa = 4.18VSIDD1164 pKa = 3.61NPLDD1168 pKa = 3.61NSVLEE1173 pKa = 4.93LGDD1176 pKa = 3.61IPITGTADD1184 pKa = 3.03VGSKK1188 pKa = 8.23VTLVLDD1194 pKa = 4.22DD1195 pKa = 4.88NEE1197 pKa = 5.5PITLTANEE1205 pKa = 4.07NGEE1208 pKa = 4.59WIYY1211 pKa = 11.03HH1212 pKa = 5.08PTPILSEE1219 pKa = 4.61GIHH1222 pKa = 5.89IVTVTAEE1229 pKa = 4.11DD1230 pKa = 3.67DD1231 pKa = 3.42QGNVSEE1237 pKa = 4.65PVSISFKK1244 pKa = 10.71VVDD1247 pKa = 4.42PNVIDD1252 pKa = 3.52EE1253 pKa = 4.52TEE1255 pKa = 3.86INITIDD1261 pKa = 5.39LSAQPQNILGNGIDD1275 pKa = 3.89HH1276 pKa = 7.48TILTAKK1282 pKa = 9.52LTDD1285 pKa = 3.75TNGEE1289 pKa = 3.92PLVNYY1294 pKa = 7.1EE1295 pKa = 4.54VKK1297 pKa = 10.64FSAPVGSFPEE1307 pKa = 4.24GFIAFTDD1314 pKa = 3.47QTGIATVKK1322 pKa = 10.01YY1323 pKa = 9.64VSAKK1327 pKa = 9.3TEE1329 pKa = 3.93SDD1331 pKa = 3.15EE1332 pKa = 4.23TLSYY1336 pKa = 10.66LVSAKK1341 pKa = 10.42AYY1343 pKa = 9.74NLDD1346 pKa = 3.63GNFVEE1351 pKa = 5.05QEE1353 pKa = 3.98QISISFNPAIISGVVIDD1370 pKa = 4.89NEE1372 pKa = 4.51TNEE1375 pKa = 4.94PIHH1378 pKa = 5.79NAKK1381 pKa = 9.97VVLSSDD1387 pKa = 4.11FNQDD1391 pKa = 2.45GTIDD1395 pKa = 3.61FTTTVLSDD1403 pKa = 3.39VEE1405 pKa = 4.3GKK1407 pKa = 10.31YY1408 pKa = 10.95VITIPNGNVSYY1419 pKa = 10.65LLEE1422 pKa = 3.84ITKK1425 pKa = 10.02PVLIGNTMQDD1435 pKa = 3.03VTFKK1439 pKa = 11.01QSVTAGSVSGSGTDD1453 pKa = 3.12EE1454 pKa = 4.64FYY1456 pKa = 10.28STEE1459 pKa = 4.04SATGIILLSDD1469 pKa = 4.22GSNGTLSLEE1478 pKa = 4.37NYY1480 pKa = 10.05DD1481 pKa = 4.08SIIVEE1486 pKa = 4.33VEE1488 pKa = 4.15DD1489 pKa = 3.91EE1490 pKa = 4.42SGDD1493 pKa = 3.47ITSLNGSVDD1502 pKa = 2.77ARR1504 pKa = 11.84TGVFLIDD1511 pKa = 3.57GLDD1514 pKa = 3.42VNKK1517 pKa = 10.64AYY1519 pKa = 8.87TLKK1522 pKa = 10.48FYY1524 pKa = 11.22YY1525 pKa = 10.57VFEE1528 pKa = 5.78DD1529 pKa = 4.09GSKK1532 pKa = 9.88IQVSSLAVVISNDD1545 pKa = 3.19GEE1547 pKa = 4.51LNISSCLIDD1556 pKa = 4.04PYY1558 pKa = 11.08GTITNKK1564 pKa = 8.52EE1565 pKa = 4.09TGEE1568 pKa = 4.24VIEE1571 pKa = 4.38GAVVEE1576 pKa = 5.23LYY1578 pKa = 10.95YY1579 pKa = 11.06ADD1581 pKa = 3.36TVRR1584 pKa = 11.84NQEE1587 pKa = 3.75NGRR1590 pKa = 11.84VKK1592 pKa = 10.24DD1593 pKa = 3.79TLVEE1597 pKa = 4.03LPILTFPPNDD1607 pKa = 2.97NHH1609 pKa = 6.23NPQNSSVEE1617 pKa = 3.87GKK1619 pKa = 9.08YY1620 pKa = 10.78AYY1622 pKa = 8.92MVYY1625 pKa = 10.44PEE1627 pKa = 4.36ADD1629 pKa = 3.41YY1630 pKa = 11.49YY1631 pKa = 10.73ILVKK1635 pKa = 10.84KK1636 pKa = 10.45NGYY1639 pKa = 7.78EE1640 pKa = 4.04LYY1642 pKa = 9.12EE1643 pKa = 4.45SPVIEE1648 pKa = 4.22VNQEE1652 pKa = 3.56IVRR1655 pKa = 11.84HH1656 pKa = 6.18DD1657 pKa = 3.71IEE1659 pKa = 4.71LTPIPQEE1666 pKa = 4.18LPATATSYY1674 pKa = 11.59YY1675 pKa = 9.69NYY1677 pKa = 10.47LVTGVLLLFIGVLTIFLYY1695 pKa = 10.51RR1696 pKa = 11.84RR1697 pKa = 11.84NRR1699 pKa = 11.84YY1700 pKa = 9.85SNN1702 pKa = 3.37

Molecular weight: 181.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A263BS86|A0A263BS86_9BACI Uncharacterized protein OS=Lottiidibacillus patelloidae OX=2670334 GN=CIB95_11750 PE=4 SV=1
MM1 pKa = 7.44KK2 pKa = 9.6RR3 pKa = 11.84TFQPNNRR10 pKa = 11.84KK11 pKa = 9.23RR12 pKa = 11.84KK13 pKa = 8.02KK14 pKa = 8.47VHH16 pKa = 5.57GFRR19 pKa = 11.84SRR21 pKa = 11.84MSTKK25 pKa = 10.29NGRR28 pKa = 11.84KK29 pKa = 8.91VLAARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.81GRR39 pKa = 11.84KK40 pKa = 8.75VLSAA44 pKa = 4.05

Molecular weight: 5.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3053

0

3053

875866

26

2026

286.9

32.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.496 ± 0.049

0.701 ± 0.013

5.066 ± 0.037

7.692 ± 0.051

4.697 ± 0.044

6.487 ± 0.046

2.052 ± 0.023

8.373 ± 0.044

7.528 ± 0.049

9.711 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.638 ± 0.022

5.042 ± 0.035

3.356 ± 0.031

3.358 ± 0.027

3.719 ± 0.032

5.95 ± 0.033

5.502 ± 0.037

6.936 ± 0.04

0.977 ± 0.018

3.719 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski