Peniophora sp. CONT

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetes incertae sedis; Russulales; Peniophoraceae; Peniophora; unclassified Peniophora

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18912 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A165Z9K0|A0A165Z9K0_9AGAM Uncharacterized protein OS=Peniophora sp. CONT OX=1314672 GN=PENSPDRAFT_758779 PE=3 SV=1
MM1 pKa = 7.96ASLLPLLLLALRR13 pKa = 11.84AHH15 pKa = 7.86AYY17 pKa = 7.2TSRR20 pKa = 11.84HH21 pKa = 4.15VTFASDD27 pKa = 4.43DD28 pKa = 3.68IEE30 pKa = 4.63KK31 pKa = 9.38RR32 pKa = 11.84TALPVAQHH40 pKa = 5.69VLSLSRR46 pKa = 11.84TVPRR50 pKa = 11.84PASKK54 pKa = 10.74AKK56 pKa = 10.42ALRR59 pKa = 11.84HH60 pKa = 4.55LTNRR64 pKa = 11.84PEE66 pKa = 4.42AKK68 pKa = 9.79NSTVVSVSGSDD79 pKa = 3.17QDD81 pKa = 3.7EE82 pKa = 4.69EE83 pKa = 4.91YY84 pKa = 11.07LVDD87 pKa = 3.39ITFGTQTFPVIVDD100 pKa = 3.86TGSSDD105 pKa = 2.77TWLVAKK111 pKa = 9.75GFQCISSSGDD121 pKa = 3.44DD122 pKa = 3.9EE123 pKa = 5.14PEE125 pKa = 4.11SEE127 pKa = 4.82CDD129 pKa = 3.89FGSSGYY135 pKa = 10.37DD136 pKa = 3.17PNVSSTFVAYY146 pKa = 9.46PGHH149 pKa = 6.45NFNIAYY155 pKa = 10.11GDD157 pKa = 4.1GEE159 pKa = 4.71FLTGDD164 pKa = 3.54VGFEE168 pKa = 4.06TVTIGDD174 pKa = 4.15LSVTSQEE181 pKa = 4.15VGVVTTAFWFGDD193 pKa = 4.06SVSSGLMGLCYY204 pKa = 10.03PGLTSVFNTTDD215 pKa = 3.68PDD217 pKa = 4.31DD218 pKa = 5.47DD219 pKa = 4.37SSSNNEE225 pKa = 3.68EE226 pKa = 3.58YY227 pKa = 11.02DD228 pKa = 3.51PFFFTAIKK236 pKa = 9.75EE237 pKa = 4.49GAVSQPVFSVALNRR251 pKa = 11.84GSVAAEE257 pKa = 3.96EE258 pKa = 4.92GSVVDD263 pKa = 4.29PDD265 pKa = 4.12LGFLAFGGIAPVDD278 pKa = 3.68VTATSVTVPIQGEE291 pKa = 4.53QVSSTDD297 pKa = 3.31SEE299 pKa = 4.69FFFYY303 pKa = 10.48TVDD306 pKa = 2.72IDD308 pKa = 4.85AYY310 pKa = 10.42VFPGSDD316 pKa = 3.39ALSTSGQSILDD327 pKa = 3.5TGTTLLYY334 pKa = 10.75LPTPIANALAAAFDD348 pKa = 4.41PPAVWSDD355 pKa = 3.61DD356 pKa = 3.33EE357 pKa = 4.48GAYY360 pKa = 10.34LVNCTATAPEE370 pKa = 4.02FAVVIGGVSFNVTAADD386 pKa = 4.86LILPIGADD394 pKa = 3.14EE395 pKa = 5.91DD396 pKa = 4.49GNQVCISGHH405 pKa = 6.85DD406 pKa = 3.7DD407 pKa = 3.79GGPDD411 pKa = 3.28EE412 pKa = 5.72DD413 pKa = 4.46GNIFILGDD421 pKa = 3.68TFLHH425 pKa = 5.75NVVSTFDD432 pKa = 3.69LANNTVTLTEE442 pKa = 4.06RR443 pKa = 11.84APYY446 pKa = 9.88

Molecular weight: 46.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A166I437|A0A166I437_9AGAM Uncharacterized protein OS=Peniophora sp. CONT OX=1314672 GN=PENSPDRAFT_649276 PE=3 SV=1
MM1 pKa = 7.87RR2 pKa = 11.84PTASSFNTTSNSPTSAPTYY21 pKa = 7.27TLPRR25 pKa = 11.84FFRR28 pKa = 11.84SSATAFLTRR37 pKa = 11.84TSCSRR42 pKa = 11.84RR43 pKa = 11.84VATTRR48 pKa = 11.84STTSSRR54 pKa = 11.84RR55 pKa = 11.84SATRR59 pKa = 11.84PTLLARR65 pKa = 11.84AIRR68 pKa = 11.84ALLARR73 pKa = 11.84SPRR76 pKa = 11.84VWVPSTPSGSRR87 pKa = 11.84TPSRR91 pKa = 11.84RR92 pKa = 11.84SFLVPRR98 pKa = 4.76

Molecular weight: 10.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18907

5

18912

7847246

49

5293

414.9

45.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.765 ± 0.02

1.34 ± 0.007

5.692 ± 0.012

5.782 ± 0.016

3.582 ± 0.01

6.564 ± 0.015

2.64 ± 0.01

4.45 ± 0.013

3.813 ± 0.016

9.605 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.075 ± 0.006

3.064 ± 0.01

6.502 ± 0.024

3.438 ± 0.011

6.758 ± 0.018

8.279 ± 0.023

5.938 ± 0.011

6.545 ± 0.012

1.532 ± 0.006

2.636 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski