Malvastrum leaf curl betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 5.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q2PAY5|Q2PAY5_9VIRU C1 protein OS=Malvastrum leaf curl betasatellite OX=339965 GN=c1 PE=4 SV=1
MM1 pKa = 7.12TIKK4 pKa = 9.84YY5 pKa = 5.36TTRR8 pKa = 11.84KK9 pKa = 9.3GLSFIINVRR18 pKa = 11.84LEE20 pKa = 3.73PHH22 pKa = 6.58RR23 pKa = 11.84EE24 pKa = 3.63VSTEE28 pKa = 3.48IQFYY32 pKa = 7.54STKK35 pKa = 10.46TPFLQKK41 pKa = 10.07QYY43 pKa = 10.89FRR45 pKa = 11.84IPYY48 pKa = 6.36THH50 pKa = 6.53QGIITPFNFNALEE63 pKa = 4.04EE64 pKa = 4.91GIKK67 pKa = 10.5NLIHH71 pKa = 7.69IMYY74 pKa = 8.72TDD76 pKa = 3.17SHH78 pKa = 8.26HH79 pKa = 7.01EE80 pKa = 3.95DD81 pKa = 3.35FRR83 pKa = 11.84YY84 pKa = 10.41EE85 pKa = 4.04DD86 pKa = 4.76LIEE89 pKa = 5.58AIDD92 pKa = 3.69ILMMHH97 pKa = 7.1EE98 pKa = 4.52APVLHH103 pKa = 6.74INLGEE108 pKa = 4.09EE109 pKa = 4.18YY110 pKa = 10.03QVYY113 pKa = 10.74SSTTMM118 pKa = 3.31

Molecular weight: 14.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q2PAY5|Q2PAY5_9VIRU C1 protein OS=Malvastrum leaf curl betasatellite OX=339965 GN=c1 PE=4 SV=1
MM1 pKa = 7.12TIKK4 pKa = 9.84YY5 pKa = 5.36TTRR8 pKa = 11.84KK9 pKa = 9.3GLSFIINVRR18 pKa = 11.84LEE20 pKa = 3.73PHH22 pKa = 6.58RR23 pKa = 11.84EE24 pKa = 3.63VSTEE28 pKa = 3.48IQFYY32 pKa = 7.54STKK35 pKa = 10.46TPFLQKK41 pKa = 10.07QYY43 pKa = 10.89FRR45 pKa = 11.84IPYY48 pKa = 6.36THH50 pKa = 6.53QGIITPFNFNALEE63 pKa = 4.04EE64 pKa = 4.91GIKK67 pKa = 10.5NLIHH71 pKa = 7.69IMYY74 pKa = 8.72TDD76 pKa = 3.17SHH78 pKa = 8.26HH79 pKa = 7.01EE80 pKa = 3.95DD81 pKa = 3.35FRR83 pKa = 11.84YY84 pKa = 10.41EE85 pKa = 4.04DD86 pKa = 4.76LIEE89 pKa = 5.58AIDD92 pKa = 3.69ILMMHH97 pKa = 7.1EE98 pKa = 4.52APVLHH103 pKa = 6.74INLGEE108 pKa = 4.09EE109 pKa = 4.18YY110 pKa = 10.03QVYY113 pKa = 10.74SSTTMM118 pKa = 3.31

Molecular weight: 14.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

118

118

118

118.0

14.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.542 ± 0.0

0.0 ± 0.0

3.39 ± 0.0

9.322 ± 0.0

5.932 ± 0.0

3.39 ± 0.0

5.932 ± 0.0

11.864 ± 0.0

4.237 ± 0.0

7.627 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.237 ± 0.0

4.237 ± 0.0

4.237 ± 0.0

4.237 ± 0.0

4.237 ± 0.0

5.085 ± 0.0

9.322 ± 0.0

3.39 ± 0.0

0.0 ± 0.0

6.78 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski