Bos taurus papillomavirus 21

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoxipapillomavirus; Dyoxipapillomavirus 2

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B2K2D0|A0A1B2K2D0_9PAPI Minor capsid protein L2 OS=Bos taurus papillomavirus 21 OX=1887219 GN=L2 PE=3 SV=1
MM1 pKa = 7.58MIGEE5 pKa = 4.58TPTIRR10 pKa = 11.84DD11 pKa = 2.91IDD13 pKa = 4.17LDD15 pKa = 3.98LTEE18 pKa = 6.36LIDD21 pKa = 4.21PQNLLCEE28 pKa = 4.22EE29 pKa = 4.68EE30 pKa = 4.13ILAEE34 pKa = 4.01EE35 pKa = 4.2VLEE38 pKa = 4.9EE39 pKa = 4.06EE40 pKa = 4.47LCPYY44 pKa = 10.38SLRR47 pKa = 11.84TCCASCSALLRR58 pKa = 11.84IFVVTSSDD66 pKa = 4.11SIRR69 pKa = 11.84TLHH72 pKa = 6.66QLLLSDD78 pKa = 5.59LSFLCIPCSQRR89 pKa = 11.84NLRR92 pKa = 11.84NEE94 pKa = 3.91RR95 pKa = 3.56

Molecular weight: 10.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B2K226|A0A1B2K226_9PAPI Major capsid protein L1 OS=Bos taurus papillomavirus 21 OX=1887219 GN=L1 PE=3 SV=1
MM1 pKa = 7.64EE2 pKa = 4.81SLADD6 pKa = 3.63RR7 pKa = 11.84FEE9 pKa = 4.96EE10 pKa = 4.15IQEE13 pKa = 4.22LLLDD17 pKa = 4.66LYY19 pKa = 10.9EE20 pKa = 4.6AGKK23 pKa = 10.47RR24 pKa = 11.84DD25 pKa = 3.47IQSQIIHH32 pKa = 6.71WDD34 pKa = 3.52YY35 pKa = 11.29LRR37 pKa = 11.84KK38 pKa = 9.96EE39 pKa = 4.32SVLLYY44 pKa = 9.19YY45 pKa = 10.58ARR47 pKa = 11.84QRR49 pKa = 11.84GLTRR53 pKa = 11.84LGLNTVPVLQASEE66 pKa = 3.94IRR68 pKa = 11.84AKK70 pKa = 10.18NAIMMGIILRR80 pKa = 11.84SLANSEE86 pKa = 4.37FGGEE90 pKa = 4.1DD91 pKa = 2.71WTLQDD96 pKa = 4.19TSIEE100 pKa = 4.28MYY102 pKa = 10.13RR103 pKa = 11.84APPQDD108 pKa = 3.22TFKK111 pKa = 11.04KK112 pKa = 9.27QGSPVEE118 pKa = 4.16VMFDD122 pKa = 3.52GDD124 pKa = 3.84PEE126 pKa = 4.55NINVYY131 pKa = 7.61TNWGRR136 pKa = 11.84IYY138 pKa = 11.06YY139 pKa = 9.91QDD141 pKa = 3.66TEE143 pKa = 4.55NNWRR147 pKa = 11.84VAEE150 pKa = 4.34GQVSYY155 pKa = 11.4DD156 pKa = 2.88GLYY159 pKa = 9.66YY160 pKa = 10.22DD161 pKa = 4.0TVNGQRR167 pKa = 11.84VFFVKK172 pKa = 10.34FDD174 pKa = 3.47EE175 pKa = 4.32QARR178 pKa = 11.84TFSKK182 pKa = 9.36TGSWRR187 pKa = 11.84VKK189 pKa = 9.69YY190 pKa = 10.21KK191 pKa = 11.0NKK193 pKa = 9.77FVSEE197 pKa = 4.55SVSSSSTPVSGSSQEE212 pKa = 3.91RR213 pKa = 11.84PRR215 pKa = 11.84VSFDD219 pKa = 3.14TDD221 pKa = 3.43SEE223 pKa = 4.38EE224 pKa = 4.88EE225 pKa = 4.21EE226 pKa = 4.69GDD228 pKa = 3.22HH229 pKa = 6.91HH230 pKa = 7.26RR231 pKa = 11.84RR232 pKa = 11.84DD233 pKa = 3.58PRR235 pKa = 11.84HH236 pKa = 6.05PLSAGRR242 pKa = 11.84SRR244 pKa = 11.84SRR246 pKa = 11.84SRR248 pKa = 11.84VSRR251 pKa = 11.84PEE253 pKa = 3.62PEE255 pKa = 3.81AGGRR259 pKa = 11.84GRR261 pKa = 11.84RR262 pKa = 11.84RR263 pKa = 11.84RR264 pKa = 11.84RR265 pKa = 11.84QGEE268 pKa = 3.91GAEE271 pKa = 4.36DD272 pKa = 3.78FGLVPEE278 pKa = 4.71EE279 pKa = 4.19VGSGHH284 pKa = 5.69RR285 pKa = 11.84TVPKK289 pKa = 10.28NIRR292 pKa = 11.84GRR294 pKa = 11.84LARR297 pKa = 11.84LQAEE301 pKa = 4.34AADD304 pKa = 3.88PPVILVRR311 pKa = 11.84GSINSLKK318 pKa = 10.24SWRR321 pKa = 11.84HH322 pKa = 4.3RR323 pKa = 11.84CNTKK327 pKa = 9.93HH328 pKa = 6.26RR329 pKa = 11.84CLFQEE334 pKa = 3.92IGTTFVWSSKK344 pKa = 9.36DD345 pKa = 3.23TSRR348 pKa = 11.84DD349 pKa = 2.9RR350 pKa = 11.84GRR352 pKa = 11.84VVVAFRR358 pKa = 11.84DD359 pKa = 4.1EE360 pKa = 4.27VQLTEE365 pKa = 4.21FLRR368 pKa = 11.84VVPMPKK374 pKa = 9.28SCSFARR380 pKa = 11.84GHH382 pKa = 6.95LDD384 pKa = 3.22SLL386 pKa = 4.26

Molecular weight: 44.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2239

95

590

373.2

42.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.449 ± 0.466

2.188 ± 0.813

6.699 ± 0.332

6.878 ± 0.347

4.69 ± 0.517

6.208 ± 0.813

1.831 ± 0.226

5.181 ± 0.445

4.868 ± 1.062

8.709 ± 0.969

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.697 ± 0.302

4.6 ± 0.518

5.538 ± 1.034

3.93 ± 0.427

6.789 ± 1.216

7.057 ± 0.801

6.699 ± 0.545

6.342 ± 0.723

1.251 ± 0.343

3.394 ± 0.392
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski