Acidovorax phage ACP17

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Busanvirus; Acidovorax virus ACP17

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 253 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A218M2T3|A0A218M2T3_9CAUD Uncharacterized protein OS=Acidovorax phage ACP17 OX=2010329 PE=4 SV=1
MM1 pKa = 7.57SSNNGASTILGITAGLGSVDD21 pKa = 4.18FVFDD25 pKa = 3.98KK26 pKa = 10.92KK27 pKa = 10.82ALQIVPPVDD36 pKa = 4.68FIFGADD42 pKa = 3.01KK43 pKa = 11.01CFPDD47 pKa = 4.43WMDD50 pKa = 3.11QSGGSIIVDD59 pKa = 2.8IDD61 pKa = 3.77GCCFDD66 pKa = 4.81VANDD70 pKa = 3.8WVSVAGDD77 pKa = 4.41SIVLDD82 pKa = 3.98ATKK85 pKa = 10.43GWQDD89 pKa = 2.93ASGDD93 pKa = 3.8QLVLDD98 pKa = 4.1NGKK101 pKa = 9.71SAVCPPDD108 pKa = 3.4WEE110 pKa = 4.36PQSGGSIDD118 pKa = 3.48VDD120 pKa = 4.73FYY122 pKa = 11.72CCTTGGGEE130 pKa = 4.68ALPIDD135 pKa = 4.5LGAVRR140 pKa = 11.84FTEE143 pKa = 4.38GSVFVADD150 pKa = 5.75AITDD154 pKa = 3.64PRR156 pKa = 11.84ISLGFYY162 pKa = 10.12EE163 pKa = 4.99GATFEE168 pKa = 4.62ADD170 pKa = 3.25LVRR173 pKa = 11.84YY174 pKa = 8.84PSVLLSADD182 pKa = 3.46AVGGEE187 pKa = 4.28YY188 pKa = 10.63VEE190 pKa = 4.35ASIYY194 pKa = 10.01TDD196 pKa = 3.18VVLPADD202 pKa = 3.94AAAGEE207 pKa = 4.16YY208 pKa = 10.83LEE210 pKa = 5.41LALAVFPAIDD220 pKa = 3.88LQAVAVDD227 pKa = 4.36GASLEE232 pKa = 4.25AKK234 pKa = 10.51VEE236 pKa = 4.23FTTGFPQTYY245 pKa = 8.07TQGEE249 pKa = 4.3WAVADD254 pKa = 4.42LEE256 pKa = 4.31ITPYY260 pKa = 10.72EE261 pKa = 4.0GLIPVAHH268 pKa = 6.46TGEE271 pKa = 4.15VLQVSVEE278 pKa = 4.43TITGFQVPVYY288 pKa = 9.99VGEE291 pKa = 4.26SADD294 pKa = 3.57ASLASTTTFDD304 pKa = 4.12ANAHH308 pKa = 5.27TGEE311 pKa = 4.22NASADD316 pKa = 3.93LAVAPPAYY324 pKa = 9.21LTAEE328 pKa = 4.43LATGEE333 pKa = 4.42SFVASLALGASSFGVNFAHH352 pKa = 6.96EE353 pKa = 4.43GSEE356 pKa = 4.48AYY358 pKa = 10.49VSLDD362 pKa = 3.28TRR364 pKa = 11.84PAADD368 pKa = 5.1LFWQFYY374 pKa = 10.29AGEE377 pKa = 4.2QGSVTLSLGANLGEE391 pKa = 4.06VGFFEE396 pKa = 4.82GVRR399 pKa = 11.84AEE401 pKa = 4.02ASLGEE406 pKa = 4.33EE407 pKa = 3.91PNVYY411 pKa = 10.23AFHH414 pKa = 6.89GEE416 pKa = 4.07VMDD419 pKa = 3.77WALRR423 pKa = 11.84TEE425 pKa = 4.92DD426 pKa = 3.64GFQAGVSQGEE436 pKa = 4.5SASLEE441 pKa = 4.09LNVRR445 pKa = 11.84VSEE448 pKa = 4.26GLGEE452 pKa = 3.99LAAADD457 pKa = 4.08GSTVFANLGALKK469 pKa = 10.25AIPLAVTFYY478 pKa = 11.29NSYY481 pKa = 8.82TVHH484 pKa = 7.16SGIGASTFLDD494 pKa = 3.96LDD496 pKa = 3.88SGCASGHH503 pKa = 5.8NPGKK507 pKa = 10.28QDD509 pKa = 2.82IHH511 pKa = 8.1RR512 pKa = 11.84IEE514 pKa = 4.26MNDD517 pKa = 3.98AEE519 pKa = 5.14FPDD522 pKa = 3.59QRR524 pKa = 11.84FDD526 pKa = 3.76GDD528 pKa = 3.93RR529 pKa = 11.84TCVSLDD535 pKa = 3.7LSAQPRR541 pKa = 11.84FSFNFFGGEE550 pKa = 3.94TFRR553 pKa = 11.84TVDD556 pKa = 3.25AADD559 pKa = 3.74PSLRR563 pKa = 11.84TVLSNEE569 pKa = 3.75GATMRR574 pKa = 11.84FALEE578 pKa = 3.82SNINFRR584 pKa = 11.84LCPGNFIPDD593 pKa = 3.41GDD595 pKa = 3.91NVYY598 pKa = 10.77VEE600 pKa = 5.29LDD602 pKa = 3.55VEE604 pKa = 5.06DD605 pKa = 4.23VGNCQSDD612 pKa = 4.36YY613 pKa = 11.34AFHH616 pKa = 6.53GVNVSAWLQANQNFQPVGHH635 pKa = 6.7TGEE638 pKa = 4.37TLTFDD643 pKa = 3.69LTTAEE648 pKa = 4.26LWTLVGQAGEE658 pKa = 4.35TFSMASQPDD667 pKa = 3.99PQPRR671 pKa = 11.84AYY673 pKa = 10.18EE674 pKa = 4.24GVRR677 pKa = 11.84VDD679 pKa = 3.21ATFYY683 pKa = 10.37EE684 pKa = 4.47PPIVGAEE691 pKa = 4.06GATAEE696 pKa = 4.07ASLTIKK702 pKa = 11.08YY703 pKa = 8.09EE704 pKa = 4.1VKK706 pKa = 10.27FDD708 pKa = 4.45EE709 pKa = 5.24VGCLDD714 pKa = 5.71NEE716 pKa = 5.3YY717 pKa = 10.06IWQDD721 pKa = 3.58DD722 pKa = 3.74NGDD725 pKa = 4.5PITEE729 pKa = 4.5LFNPVAVEE737 pKa = 3.94MDD739 pKa = 4.13PFSHH743 pKa = 8.03DD744 pKa = 2.9IRR746 pKa = 11.84AHH748 pKa = 5.96CEE750 pKa = 3.48

Molecular weight: 79.56 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A218M3A9|A0A218M3A9_9CAUD Uncharacterized protein OS=Acidovorax phage ACP17 OX=2010329 PE=4 SV=1
MM1 pKa = 7.92AKK3 pKa = 9.03FTSLNTQVYY12 pKa = 9.79IPDD15 pKa = 3.46NFAPLGKK22 pKa = 9.59EE23 pKa = 3.55KK24 pKa = 10.5KK25 pKa = 10.56GYY27 pKa = 10.12FVDD30 pKa = 3.83LGDD33 pKa = 4.05RR34 pKa = 11.84SVHH37 pKa = 5.82SIHH40 pKa = 7.58RR41 pKa = 11.84GGCLKK46 pKa = 10.82ALTPYY51 pKa = 9.96KK52 pKa = 10.38GRR54 pKa = 11.84YY55 pKa = 7.94KK56 pKa = 10.54LRR58 pKa = 11.84PAAGGWLARR67 pKa = 11.84DD68 pKa = 4.4VIAKK72 pKa = 9.94AKK74 pKa = 8.4RR75 pKa = 11.84TSKK78 pKa = 9.17TPRR81 pKa = 11.84FARR84 pKa = 11.84VV85 pKa = 2.74

Molecular weight: 9.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

253

0

253

48500

40

1903

191.7

21.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.532 ± 0.241

1.157 ± 0.072

6.161 ± 0.13

6.66 ± 0.168

4.365 ± 0.124

7.237 ± 0.191

1.944 ± 0.095

5.062 ± 0.119

5.757 ± 0.19

7.668 ± 0.137

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.773 ± 0.096

4.054 ± 0.124

4.235 ± 0.106

3.449 ± 0.097

5.416 ± 0.137

6.167 ± 0.164

5.852 ± 0.172

7.437 ± 0.159

1.596 ± 0.083

3.478 ± 0.109
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski