Acetobacter senegalensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter

Average proteome isoelectric point is 6.75

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3497 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0U5F0P5|A0A0U5F0P5_9PROT GCN5-related N-acetyltransferase OS=Acetobacter senegalensis OX=446692 GN=ASN_2227 PE=4 SV=1
MM1 pKa = 7.9PFQNQVNQEE10 pKa = 3.92LAYY13 pKa = 10.09GVPGTFASNNPDD25 pKa = 3.08ASAVPPEE32 pKa = 4.1GAYY35 pKa = 10.17VAGTGGCTIAAFGWDD50 pKa = 3.46QGDD53 pKa = 3.78GTVLNAPPASTTSYY67 pKa = 10.15TVTALAVGAGGTGYY81 pKa = 11.27AVGDD85 pKa = 3.65TAAFAGGKK93 pKa = 8.3ATVSTIGTGGVVTAVTLQSATAQSTDD119 pKa = 3.13PTATGVATTTNGSGSGLTLNVTGTSSTTAAGAPTGLVFNDD159 pKa = 3.57RR160 pKa = 11.84SAWISDD166 pKa = 3.35IYY168 pKa = 11.5DD169 pKa = 3.64EE170 pKa = 4.79ATMVMPQGYY179 pKa = 7.75MVDD182 pKa = 3.87LKK184 pKa = 10.46TAGDD188 pKa = 3.83YY189 pKa = 9.94FAAATTAATAGQKK202 pKa = 9.84VFASTTDD209 pKa = 3.41GTLSTGAAGATVTGAVEE226 pKa = 4.07TNFYY230 pKa = 8.8VTLGGSAGEE239 pKa = 4.51TITISTWSRR248 pKa = 11.84GG249 pKa = 3.51

Molecular weight: 24.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0U4Y6H5|A0A0U4Y6H5_9PROT Aminopeptidase OS=Acetobacter senegalensis OX=446692 GN=pepN PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 10.2QPSRR9 pKa = 11.84LVRR12 pKa = 11.84KK13 pKa = 9.21RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.48GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84RR29 pKa = 11.84IIANRR34 pKa = 11.84RR35 pKa = 11.84SKK37 pKa = 10.47GRR39 pKa = 11.84KK40 pKa = 8.72RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 5.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3497

0

3497

1106584

19

2854

316.4

34.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.498 ± 0.056

1.057 ± 0.014

5.262 ± 0.031

5.162 ± 0.042

3.655 ± 0.025

8.171 ± 0.038

2.422 ± 0.02

4.847 ± 0.035

3.427 ± 0.033

10.216 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.535 ± 0.019

2.922 ± 0.033

5.558 ± 0.038

3.786 ± 0.027

6.556 ± 0.039

6.018 ± 0.037

5.933 ± 0.029

7.124 ± 0.036

1.448 ± 0.016

2.404 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski