Enterovirga rhinocerotis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Enterovirga

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4822 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R7C088|A0A4R7C088_9RHIZ Uncharacterized protein OS=Enterovirga rhinocerotis OX=1339210 GN=EV668_2723 PE=4 SV=1
MM1 pKa = 7.48AGVFRR6 pKa = 11.84FTSGGNYY13 pKa = 10.1DD14 pKa = 4.26PNNSSSIHH22 pKa = 6.34RR23 pKa = 11.84FNSGPPLDD31 pKa = 5.44LFINTNDD38 pKa = 3.46SMVVTASSYY47 pKa = 10.27FLAYY51 pKa = 10.46NSGFGTSGAWTLNAPDD67 pKa = 4.19GAYY70 pKa = 10.55LGPTQHH76 pKa = 7.42AIYY79 pKa = 10.32LDD81 pKa = 3.83YY82 pKa = 11.51SGGAGVANFQGGNWGDD98 pKa = 3.65VLIGGSAADD107 pKa = 3.85TLNGGGGDD115 pKa = 3.67DD116 pKa = 4.23RR117 pKa = 11.84LNGGLGADD125 pKa = 3.71TMTGGTGNDD134 pKa = 2.81IFYY137 pKa = 10.44VDD139 pKa = 3.83NVGDD143 pKa = 3.87IVVEE147 pKa = 3.9LAGQGTDD154 pKa = 3.48QVRR157 pKa = 11.84TTLDD161 pKa = 3.36NYY163 pKa = 10.67VLGANVEE170 pKa = 4.26NLFLMGTADD179 pKa = 5.18LSGTGNALNNVLQGNSGANTLSGGAGNDD207 pKa = 3.43RR208 pKa = 11.84LDD210 pKa = 3.56GRR212 pKa = 11.84AGADD216 pKa = 3.31TLIGGTGNDD225 pKa = 3.24TYY227 pKa = 11.51YY228 pKa = 10.22IDD230 pKa = 5.13DD231 pKa = 4.86LGDD234 pKa = 3.54VMVEE238 pKa = 4.18EE239 pKa = 4.89AGEE242 pKa = 4.66GYY244 pKa = 8.16DD245 pKa = 3.6TAFLSVDD252 pKa = 3.94GYY254 pKa = 11.59VLADD258 pKa = 3.66GASVEE263 pKa = 4.24RR264 pKa = 11.84LILRR268 pKa = 11.84DD269 pKa = 4.18GIVSASGNDD278 pKa = 3.69LDD280 pKa = 6.17NVLQGNAGDD289 pKa = 4.1NVLSGGAGRR298 pKa = 11.84DD299 pKa = 3.69TLKK302 pKa = 11.11GGAGNDD308 pKa = 3.91TLSGGAGIDD317 pKa = 3.44SLYY320 pKa = 10.98GGTGADD326 pKa = 3.51TFVLTATTADD336 pKa = 3.52RR337 pKa = 11.84DD338 pKa = 3.91MIRR341 pKa = 11.84DD342 pKa = 4.35FVAGEE347 pKa = 3.99DD348 pKa = 3.71TLQISASLFGGGLLAGDD365 pKa = 4.67ALTPEE370 pKa = 4.27QFVLSTTGRR379 pKa = 11.84ATSATDD385 pKa = 2.88RR386 pKa = 11.84FLYY389 pKa = 10.71VEE391 pKa = 4.63SKK393 pKa = 10.3GHH395 pKa = 7.08LYY397 pKa = 10.82YY398 pKa = 10.93DD399 pKa = 3.88ADD401 pKa = 3.68GSGRR405 pKa = 11.84DD406 pKa = 3.74EE407 pKa = 4.43APQLIAYY414 pKa = 7.51LTPNTALTASDD425 pKa = 4.46FYY427 pKa = 11.97VFF429 pKa = 4.82

Molecular weight: 43.76 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R7C693|A0A4R7C693_9RHIZ (2R 3S)-2-methylisocitrate dehydratase OS=Enterovirga rhinocerotis OX=1339210 GN=EV668_1367 PE=4 SV=1
MM1 pKa = 6.55VTLAKK6 pKa = 10.43SPARR10 pKa = 11.84SVSLSQGSAMGALAHH25 pKa = 6.47PRR27 pKa = 11.84APAQVRR33 pKa = 11.84AAPRR37 pKa = 11.84LPASLMRR44 pKa = 11.84MGLAGRR50 pKa = 11.84LAIAGVGTVLLWAAIGLGLAA70 pKa = 4.33

Molecular weight: 6.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4822

0

4822

1527424

29

4184

316.8

34.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.495 ± 0.049

0.77 ± 0.01

5.565 ± 0.027

5.69 ± 0.033

3.542 ± 0.021

9.222 ± 0.037

1.878 ± 0.016

4.896 ± 0.027

2.735 ± 0.027

10.212 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.22 ± 0.014

2.086 ± 0.017

5.706 ± 0.032

2.631 ± 0.018

8.027 ± 0.039

5.301 ± 0.024

5.153 ± 0.022

7.525 ± 0.029

1.298 ± 0.013

2.049 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski