Polar bear mastadenovirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; unclassified Mastadenovirus

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 21 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z4QJ25|A0A2Z4QJ25_9ADEN PVI OS=Polar bear mastadenovirus 1 OX=2250215 PE=4 SV=1
MM1 pKa = 7.9PLFSLRR7 pKa = 11.84SPRR10 pKa = 11.84CSRR13 pKa = 11.84SAFRR17 pKa = 11.84GGPSCLSFDD26 pKa = 4.07FPIVMRR32 pKa = 11.84YY33 pKa = 7.7LTVPLDD39 pKa = 3.38YY40 pKa = 11.74AMIRR44 pKa = 11.84IIDD47 pKa = 4.28EE48 pKa = 3.83VDD50 pKa = 2.87MDD52 pKa = 4.8DD53 pKa = 5.67GVDD56 pKa = 3.82AVDD59 pKa = 4.9DD60 pKa = 3.82SWDD63 pKa = 3.28VSLYY67 pKa = 11.1DD68 pKa = 4.88LFDD71 pKa = 4.02ISPEE75 pKa = 3.9PQPAPIEE82 pKa = 4.19EE83 pKa = 4.71GEE85 pKa = 4.33PEE87 pKa = 4.38VLRR90 pKa = 11.84TPSISPVPSPAILTPPLTPEE110 pKa = 4.47SVPEE114 pKa = 4.01MDD116 pKa = 4.07LSCYY120 pKa = 10.5EE121 pKa = 4.38DD122 pKa = 3.94MPPSSEE128 pKa = 4.76DD129 pKa = 3.21EE130 pKa = 4.32SEE132 pKa = 4.82PIVLDD137 pKa = 3.67YY138 pKa = 11.4PEE140 pKa = 5.42VPGQQCSSCNQFRR153 pKa = 11.84DD154 pKa = 3.7RR155 pKa = 11.84LGDD158 pKa = 3.72PYY160 pKa = 11.1VLCSLCYY167 pKa = 8.77MRR169 pKa = 11.84RR170 pKa = 11.84ISTFVYY176 pKa = 9.39SKK178 pKa = 10.83YY179 pKa = 10.75GAGII183 pKa = 3.72

Molecular weight: 20.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z4QJE3|A0A2Z4QJE3_9ADEN PIIIa protein OS=Polar bear mastadenovirus 1 OX=2250215 PE=3 SV=1
MM1 pKa = 7.9DD2 pKa = 3.83VFYY5 pKa = 10.73IAVDD9 pKa = 3.61EE10 pKa = 4.46KK11 pKa = 11.74DD12 pKa = 3.23MSKK15 pKa = 8.77VTFRR19 pKa = 11.84VRR21 pKa = 11.84VPVVNKK27 pKa = 7.37TEE29 pKa = 3.88RR30 pKa = 11.84GLRR33 pKa = 11.84RR34 pKa = 11.84KK35 pKa = 9.83RR36 pKa = 11.84RR37 pKa = 11.84TKK39 pKa = 10.21KK40 pKa = 10.18LQGGFLPLLAPIIAAAIGAIPGIASVALAASQKK73 pKa = 10.36HH74 pKa = 4.71

Molecular weight: 8.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

20

1

21

8008

74

913

381.3

43.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.857 ± 0.199

1.711 ± 0.319

5.519 ± 0.283

5.832 ± 0.428

4.608 ± 0.248

5.644 ± 0.442

2.485 ± 0.187

5.644 ± 0.318

4.92 ± 0.538

9.366 ± 0.453

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.473 ± 0.293

5.42 ± 0.324

6.056 ± 0.411

3.709 ± 0.292

6.406 ± 0.46

7.493 ± 0.354

5.869 ± 0.334

5.769 ± 0.367

1.324 ± 0.148

3.896 ± 0.34
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski