Rhizopus azygosporus (Rhizopus microsporus var. azygosporus)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina; Mucoromycetes; Mucorales; Mucorineae; Rhizopodaceae; Rhizopus

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 15771 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A367IPX5|A0A367IPX5_RHIAZ Uncharacterized protein (Fragment) OS=Rhizopus azygosporus OX=86630 GN=CU097_001865 PE=4 SV=1
PP1 pKa = 7.01VAFEE5 pKa = 4.84DD6 pKa = 4.97FEE8 pKa = 4.45FTLGYY13 pKa = 10.84DD14 pKa = 3.68FAVPIDD20 pKa = 3.92FNEE23 pKa = 4.71LEE25 pKa = 5.26DD26 pKa = 4.19IPFNPEE32 pKa = 3.31AHH34 pKa = 5.83SHH36 pKa = 5.88VLDD39 pKa = 3.78EE40 pKa = 5.56DD41 pKa = 3.57EE42 pKa = 6.09RR43 pKa = 11.84DD44 pKa = 3.51MFNQFLDD51 pKa = 3.58QFDD54 pKa = 4.08TDD56 pKa = 4.57GDD58 pKa = 3.5IHH60 pKa = 6.69MDD62 pKa = 3.81PSAFSFPVQVDD73 pKa = 3.33EE74 pKa = 6.64DD75 pKa = 4.46GLCEE79 pKa = 4.32SFLLHH84 pKa = 7.35SLDD87 pKa = 4.06DD88 pKa = 4.1RR89 pKa = 11.84NNVIEE94 pKa = 5.07DD95 pKa = 3.34NSEE98 pKa = 4.2YY99 pKa = 10.98EE100 pKa = 4.27HH101 pKa = 6.67GASLLKK107 pKa = 10.51EE108 pKa = 3.82ATNRR112 pKa = 11.84LGYY115 pKa = 10.19LCSSTQSTGNISSGLNTSNTNHH137 pKa = 6.19YY138 pKa = 10.93GEE140 pKa = 4.91LTVPMM145 pKa = 5.3

Molecular weight: 16.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A367JRL9|A0A367JRL9_RHIAZ Uncharacterized protein OS=Rhizopus azygosporus OX=86630 GN=CU097_012938 PE=4 SV=1
MM1 pKa = 7.57FGQLLTTATLRR12 pKa = 11.84FTSLTNAVRR21 pKa = 11.84PTLMGQSMFSNPLSNVLTTQMRR43 pKa = 11.84FVTRR47 pKa = 11.84GNTYY51 pKa = 10.12QPSQLVRR58 pKa = 11.84KK59 pKa = 9.04RR60 pKa = 11.84RR61 pKa = 11.84HH62 pKa = 5.16GFLTRR67 pKa = 11.84LATKK71 pKa = 10.26NGRR74 pKa = 11.84HH75 pKa = 5.88IINRR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84MKK83 pKa = 10.08GRR85 pKa = 11.84KK86 pKa = 8.57FLSHH90 pKa = 6.98

Molecular weight: 10.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

15771

0

15771

6121853

50

5889

388.2

43.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.442 ± 0.016

1.409 ± 0.009

5.715 ± 0.015

6.701 ± 0.022

3.993 ± 0.013

4.88 ± 0.017

2.533 ± 0.009

6.342 ± 0.016

6.639 ± 0.021

9.216 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.42 ± 0.008

4.836 ± 0.014

4.743 ± 0.017

4.623 ± 0.015

4.97 ± 0.015

7.906 ± 0.024

6.031 ± 0.014

5.906 ± 0.014

1.16 ± 0.006

3.534 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski