Hubei narna-like virus 17

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 9.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KIF7|A0A1L3KIF7_9VIRU RNA-dependent RNA polymerase OS=Hubei narna-like virus 17 OX=1922947 PE=4 SV=1
MM1 pKa = 7.34VSPIGNLIVVRR12 pKa = 11.84PRR14 pKa = 11.84VYY16 pKa = 10.89TMGMTAAILRR26 pKa = 11.84RR27 pKa = 11.84MVHH30 pKa = 6.61RR31 pKa = 11.84NLAPGSLMLSLSRR44 pKa = 11.84SEE46 pKa = 3.68RR47 pKa = 11.84RR48 pKa = 11.84LRR50 pKa = 11.84QRR52 pKa = 11.84SEE54 pKa = 4.93VEE56 pKa = 4.14QQWLSDD62 pKa = 3.53FVRR65 pKa = 11.84FADD68 pKa = 3.88SAFALAIRR76 pKa = 11.84THH78 pKa = 6.31LRR80 pKa = 11.84QLQGDD85 pKa = 4.05DD86 pKa = 3.62VLAHH90 pKa = 6.23MKK92 pKa = 9.77TMARR96 pKa = 11.84LYY98 pKa = 11.1AFLAKK103 pKa = 10.77NEE105 pKa = 4.11VKK107 pKa = 10.56KK108 pKa = 10.62IASWWKK114 pKa = 8.76EE115 pKa = 3.47NCFQLLDD122 pKa = 3.83RR123 pKa = 11.84SLQAGDD129 pKa = 3.74EE130 pKa = 4.43ANNATGDD137 pKa = 3.91NEE139 pKa = 4.42VNTSFTRR146 pKa = 11.84SALAAASKK154 pKa = 10.75RR155 pKa = 11.84KK156 pKa = 8.94MKK158 pKa = 10.37RR159 pKa = 11.84ARR161 pKa = 11.84KK162 pKa = 9.29DD163 pKa = 3.14RR164 pKa = 11.84QRR166 pKa = 11.84VKK168 pKa = 10.95KK169 pKa = 10.91LMGTRR174 pKa = 11.84SSRR177 pKa = 11.84QVSSLFASLIRR188 pKa = 11.84SSGLQSFRR196 pKa = 11.84EE197 pKa = 5.07GIALGLSARR206 pKa = 11.84ILPAPILTEE215 pKa = 4.38PIVEE219 pKa = 4.17DD220 pKa = 3.37EE221 pKa = 3.92ARR223 pKa = 11.84KK224 pKa = 9.7LRR226 pKa = 11.84EE227 pKa = 3.95RR228 pKa = 11.84LTGRR232 pKa = 11.84PVVIPPEE239 pKa = 4.11DD240 pKa = 3.48AGIHH244 pKa = 4.41QSIGEE249 pKa = 4.18TMLRR253 pKa = 11.84ISNRR257 pKa = 11.84IKK259 pKa = 10.7RR260 pKa = 11.84FIKK263 pKa = 10.46VEE265 pKa = 3.86GRR267 pKa = 11.84KK268 pKa = 9.17IPLPTDD274 pKa = 3.38SKK276 pKa = 10.88IVSEE280 pKa = 4.36ADD282 pKa = 2.98THH284 pKa = 6.26EE285 pKa = 4.43VLTSRR290 pKa = 11.84CIAHH294 pKa = 6.91AAEE297 pKa = 4.52SSNGRR302 pKa = 11.84YY303 pKa = 6.96EE304 pKa = 4.05TFIGNVRR311 pKa = 11.84TVEE314 pKa = 3.85AKK316 pKa = 10.11PRR318 pKa = 11.84INKK321 pKa = 8.43TLFLAEE327 pKa = 4.24PGYY330 pKa = 10.01KK331 pKa = 9.86VRR333 pKa = 11.84VASIPPCSSMVTAGRR348 pKa = 11.84TVNQLLLRR356 pKa = 11.84AISKK360 pKa = 9.9AYY362 pKa = 8.69PAQTSLGIGTPKK374 pKa = 10.41EE375 pKa = 3.68FLAEE379 pKa = 4.18FKK381 pKa = 10.89KK382 pKa = 10.62CDD384 pKa = 3.52RR385 pKa = 11.84QCRR388 pKa = 11.84WLYY391 pKa = 10.16STDD394 pKa = 2.9LTAATDD400 pKa = 4.78HH401 pKa = 6.95IDD403 pKa = 2.98SSYY406 pKa = 11.83AMSAVEE412 pKa = 4.76DD413 pKa = 5.23LITEE417 pKa = 4.24MVNQGFTAAEE427 pKa = 4.22SVFWDD432 pKa = 4.12QLPEE436 pKa = 4.0MQTMAVCHH444 pKa = 5.31QNSRR448 pKa = 11.84EE449 pKa = 3.96PFMSFTMKK457 pKa = 10.44KK458 pKa = 9.25GVLMGKK464 pKa = 9.16PLTWPILTILQLTALEE480 pKa = 4.32HH481 pKa = 6.51AGLLARR487 pKa = 11.84SHH489 pKa = 6.51IVGDD493 pKa = 3.79DD494 pKa = 3.37ALVYY498 pKa = 10.63ASEE501 pKa = 4.46EE502 pKa = 4.2EE503 pKa = 4.1YY504 pKa = 11.42ADD506 pKa = 3.82YY507 pKa = 11.46VKK509 pKa = 9.82TAQAMGLVFNPSKK522 pKa = 8.02THH524 pKa = 5.14RR525 pKa = 11.84TRR527 pKa = 11.84SYY529 pKa = 11.25GILAQNVIKK538 pKa = 10.72LVGVPTTRR546 pKa = 11.84DD547 pKa = 3.28VKK549 pKa = 11.1DD550 pKa = 3.68KK551 pKa = 10.8IVRR554 pKa = 11.84TTEE557 pKa = 3.55NTLWAHH563 pKa = 6.11IEE565 pKa = 3.7EE566 pKa = 4.59AARR569 pKa = 11.84KK570 pKa = 8.92QGLVHH575 pKa = 7.1FGMDD579 pKa = 3.24NVRR582 pKa = 11.84SPRR585 pKa = 11.84RR586 pKa = 11.84YY587 pKa = 8.08EE588 pKa = 3.9SYY590 pKa = 11.12AFRR593 pKa = 11.84IEE595 pKa = 3.8QQIPYY600 pKa = 9.84VPEE603 pKa = 3.73LLAARR608 pKa = 11.84GQLRR612 pKa = 11.84KK613 pKa = 10.24DD614 pKa = 3.32PYY616 pKa = 11.64APFNLPSVRR625 pKa = 11.84RR626 pKa = 11.84LATLPRR632 pKa = 11.84WIRR635 pKa = 11.84DD636 pKa = 3.4RR637 pKa = 11.84VPNAFARR644 pKa = 11.84ANPQATKK651 pKa = 10.74VLLKK655 pKa = 10.45RR656 pKa = 11.84GVDD659 pKa = 3.01ISYY662 pKa = 9.48PVQFGGAAVMSVTTIKK678 pKa = 10.78RR679 pKa = 11.84MTKK682 pKa = 9.13RR683 pKa = 11.84HH684 pKa = 5.68LKK686 pKa = 9.57GAYY689 pKa = 9.63ALGRR693 pKa = 11.84YY694 pKa = 8.68ILANPTSYY702 pKa = 10.72TRR704 pKa = 11.84MSRR707 pKa = 11.84LMTTQATHH715 pKa = 6.01KK716 pKa = 9.31RR717 pKa = 11.84VTVTPVAITVEE728 pKa = 4.43KK729 pKa = 10.52VLEE732 pKa = 5.09DD733 pKa = 3.34IPTVPKK739 pKa = 10.94GKK741 pKa = 10.53GCDD744 pKa = 2.83IKK746 pKa = 8.62TTRR749 pKa = 11.84EE750 pKa = 3.8AVRR753 pKa = 11.84SITNDD758 pKa = 3.09ALVLLEE764 pKa = 4.17FAKK767 pKa = 10.74ASQVKK772 pKa = 10.35DD773 pKa = 3.49RR774 pKa = 11.84ITYY777 pKa = 9.58RR778 pKa = 11.84FEE780 pKa = 3.88KK781 pKa = 7.71TAHH784 pKa = 5.98MAACSHH790 pKa = 6.94PSMVLEE796 pKa = 4.15SFANKK801 pKa = 8.42ARR803 pKa = 11.84KK804 pKa = 8.52MKK806 pKa = 10.18VPRR809 pKa = 11.84PEE811 pKa = 3.64TVYY814 pKa = 11.15KK815 pKa = 10.24LWKK818 pKa = 9.75SLRR821 pKa = 11.84EE822 pKa = 3.94PNIDD826 pKa = 3.77YY827 pKa = 10.94DD828 pKa = 4.07PEE830 pKa = 4.12ALKK833 pKa = 10.8DD834 pKa = 3.34LWRR837 pKa = 11.84LSNATGATIVPTVSTNKK854 pKa = 9.82IEE856 pKa = 4.28TLRR859 pKa = 11.84LAKK862 pKa = 10.45YY863 pKa = 10.04SSLRR867 pKa = 11.84NTSAQNLDD875 pKa = 3.5TSTQDD880 pKa = 3.04TKK882 pKa = 10.94IIGNRR887 pKa = 11.84EE888 pKa = 3.84VSSSISLFGKK898 pKa = 9.94IATILAGNLEE908 pKa = 4.47LAQVQQITRR917 pKa = 11.84KK918 pKa = 8.17LTRR921 pKa = 11.84LQRR924 pKa = 11.84RR925 pKa = 11.84AVRR928 pKa = 11.84LGRR931 pKa = 11.84RR932 pKa = 11.84VRR934 pKa = 11.84ASAPTKK940 pKa = 10.72NSS942 pKa = 3.05

Molecular weight: 105.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KIF7|A0A1L3KIF7_9VIRU RNA-dependent RNA polymerase OS=Hubei narna-like virus 17 OX=1922947 PE=4 SV=1
MM1 pKa = 7.34VSPIGNLIVVRR12 pKa = 11.84PRR14 pKa = 11.84VYY16 pKa = 10.89TMGMTAAILRR26 pKa = 11.84RR27 pKa = 11.84MVHH30 pKa = 6.61RR31 pKa = 11.84NLAPGSLMLSLSRR44 pKa = 11.84SEE46 pKa = 3.68RR47 pKa = 11.84RR48 pKa = 11.84LRR50 pKa = 11.84QRR52 pKa = 11.84SEE54 pKa = 4.93VEE56 pKa = 4.14QQWLSDD62 pKa = 3.53FVRR65 pKa = 11.84FADD68 pKa = 3.88SAFALAIRR76 pKa = 11.84THH78 pKa = 6.31LRR80 pKa = 11.84QLQGDD85 pKa = 4.05DD86 pKa = 3.62VLAHH90 pKa = 6.23MKK92 pKa = 9.77TMARR96 pKa = 11.84LYY98 pKa = 11.1AFLAKK103 pKa = 10.77NEE105 pKa = 4.11VKK107 pKa = 10.56KK108 pKa = 10.62IASWWKK114 pKa = 8.76EE115 pKa = 3.47NCFQLLDD122 pKa = 3.83RR123 pKa = 11.84SLQAGDD129 pKa = 3.74EE130 pKa = 4.43ANNATGDD137 pKa = 3.91NEE139 pKa = 4.42VNTSFTRR146 pKa = 11.84SALAAASKK154 pKa = 10.75RR155 pKa = 11.84KK156 pKa = 8.94MKK158 pKa = 10.37RR159 pKa = 11.84ARR161 pKa = 11.84KK162 pKa = 9.29DD163 pKa = 3.14RR164 pKa = 11.84QRR166 pKa = 11.84VKK168 pKa = 10.95KK169 pKa = 10.91LMGTRR174 pKa = 11.84SSRR177 pKa = 11.84QVSSLFASLIRR188 pKa = 11.84SSGLQSFRR196 pKa = 11.84EE197 pKa = 5.07GIALGLSARR206 pKa = 11.84ILPAPILTEE215 pKa = 4.38PIVEE219 pKa = 4.17DD220 pKa = 3.37EE221 pKa = 3.92ARR223 pKa = 11.84KK224 pKa = 9.7LRR226 pKa = 11.84EE227 pKa = 3.95RR228 pKa = 11.84LTGRR232 pKa = 11.84PVVIPPEE239 pKa = 4.11DD240 pKa = 3.48AGIHH244 pKa = 4.41QSIGEE249 pKa = 4.18TMLRR253 pKa = 11.84ISNRR257 pKa = 11.84IKK259 pKa = 10.7RR260 pKa = 11.84FIKK263 pKa = 10.46VEE265 pKa = 3.86GRR267 pKa = 11.84KK268 pKa = 9.17IPLPTDD274 pKa = 3.38SKK276 pKa = 10.88IVSEE280 pKa = 4.36ADD282 pKa = 2.98THH284 pKa = 6.26EE285 pKa = 4.43VLTSRR290 pKa = 11.84CIAHH294 pKa = 6.91AAEE297 pKa = 4.52SSNGRR302 pKa = 11.84YY303 pKa = 6.96EE304 pKa = 4.05TFIGNVRR311 pKa = 11.84TVEE314 pKa = 3.85AKK316 pKa = 10.11PRR318 pKa = 11.84INKK321 pKa = 8.43TLFLAEE327 pKa = 4.24PGYY330 pKa = 10.01KK331 pKa = 9.86VRR333 pKa = 11.84VASIPPCSSMVTAGRR348 pKa = 11.84TVNQLLLRR356 pKa = 11.84AISKK360 pKa = 9.9AYY362 pKa = 8.69PAQTSLGIGTPKK374 pKa = 10.41EE375 pKa = 3.68FLAEE379 pKa = 4.18FKK381 pKa = 10.89KK382 pKa = 10.62CDD384 pKa = 3.52RR385 pKa = 11.84QCRR388 pKa = 11.84WLYY391 pKa = 10.16STDD394 pKa = 2.9LTAATDD400 pKa = 4.78HH401 pKa = 6.95IDD403 pKa = 2.98SSYY406 pKa = 11.83AMSAVEE412 pKa = 4.76DD413 pKa = 5.23LITEE417 pKa = 4.24MVNQGFTAAEE427 pKa = 4.22SVFWDD432 pKa = 4.12QLPEE436 pKa = 4.0MQTMAVCHH444 pKa = 5.31QNSRR448 pKa = 11.84EE449 pKa = 3.96PFMSFTMKK457 pKa = 10.44KK458 pKa = 9.25GVLMGKK464 pKa = 9.16PLTWPILTILQLTALEE480 pKa = 4.32HH481 pKa = 6.51AGLLARR487 pKa = 11.84SHH489 pKa = 6.51IVGDD493 pKa = 3.79DD494 pKa = 3.37ALVYY498 pKa = 10.63ASEE501 pKa = 4.46EE502 pKa = 4.2EE503 pKa = 4.1YY504 pKa = 11.42ADD506 pKa = 3.82YY507 pKa = 11.46VKK509 pKa = 9.82TAQAMGLVFNPSKK522 pKa = 8.02THH524 pKa = 5.14RR525 pKa = 11.84TRR527 pKa = 11.84SYY529 pKa = 11.25GILAQNVIKK538 pKa = 10.72LVGVPTTRR546 pKa = 11.84DD547 pKa = 3.28VKK549 pKa = 11.1DD550 pKa = 3.68KK551 pKa = 10.8IVRR554 pKa = 11.84TTEE557 pKa = 3.55NTLWAHH563 pKa = 6.11IEE565 pKa = 3.7EE566 pKa = 4.59AARR569 pKa = 11.84KK570 pKa = 8.92QGLVHH575 pKa = 7.1FGMDD579 pKa = 3.24NVRR582 pKa = 11.84SPRR585 pKa = 11.84RR586 pKa = 11.84YY587 pKa = 8.08EE588 pKa = 3.9SYY590 pKa = 11.12AFRR593 pKa = 11.84IEE595 pKa = 3.8QQIPYY600 pKa = 9.84VPEE603 pKa = 3.73LLAARR608 pKa = 11.84GQLRR612 pKa = 11.84KK613 pKa = 10.24DD614 pKa = 3.32PYY616 pKa = 11.64APFNLPSVRR625 pKa = 11.84RR626 pKa = 11.84LATLPRR632 pKa = 11.84WIRR635 pKa = 11.84DD636 pKa = 3.4RR637 pKa = 11.84VPNAFARR644 pKa = 11.84ANPQATKK651 pKa = 10.74VLLKK655 pKa = 10.45RR656 pKa = 11.84GVDD659 pKa = 3.01ISYY662 pKa = 9.48PVQFGGAAVMSVTTIKK678 pKa = 10.78RR679 pKa = 11.84MTKK682 pKa = 9.13RR683 pKa = 11.84HH684 pKa = 5.68LKK686 pKa = 9.57GAYY689 pKa = 9.63ALGRR693 pKa = 11.84YY694 pKa = 8.68ILANPTSYY702 pKa = 10.72TRR704 pKa = 11.84MSRR707 pKa = 11.84LMTTQATHH715 pKa = 6.01KK716 pKa = 9.31RR717 pKa = 11.84VTVTPVAITVEE728 pKa = 4.43KK729 pKa = 10.52VLEE732 pKa = 5.09DD733 pKa = 3.34IPTVPKK739 pKa = 10.94GKK741 pKa = 10.53GCDD744 pKa = 2.83IKK746 pKa = 8.62TTRR749 pKa = 11.84EE750 pKa = 3.8AVRR753 pKa = 11.84SITNDD758 pKa = 3.09ALVLLEE764 pKa = 4.17FAKK767 pKa = 10.74ASQVKK772 pKa = 10.35DD773 pKa = 3.49RR774 pKa = 11.84ITYY777 pKa = 9.58RR778 pKa = 11.84FEE780 pKa = 3.88KK781 pKa = 7.71TAHH784 pKa = 5.98MAACSHH790 pKa = 6.94PSMVLEE796 pKa = 4.15SFANKK801 pKa = 8.42ARR803 pKa = 11.84KK804 pKa = 8.52MKK806 pKa = 10.18VPRR809 pKa = 11.84PEE811 pKa = 3.64TVYY814 pKa = 11.15KK815 pKa = 10.24LWKK818 pKa = 9.75SLRR821 pKa = 11.84EE822 pKa = 3.94PNIDD826 pKa = 3.77YY827 pKa = 10.94DD828 pKa = 4.07PEE830 pKa = 4.12ALKK833 pKa = 10.8DD834 pKa = 3.34LWRR837 pKa = 11.84LSNATGATIVPTVSTNKK854 pKa = 9.82IEE856 pKa = 4.28TLRR859 pKa = 11.84LAKK862 pKa = 10.45YY863 pKa = 10.04SSLRR867 pKa = 11.84NTSAQNLDD875 pKa = 3.5TSTQDD880 pKa = 3.04TKK882 pKa = 10.94IIGNRR887 pKa = 11.84EE888 pKa = 3.84VSSSISLFGKK898 pKa = 9.94IATILAGNLEE908 pKa = 4.47LAQVQQITRR917 pKa = 11.84KK918 pKa = 8.17LTRR921 pKa = 11.84LQRR924 pKa = 11.84RR925 pKa = 11.84AVRR928 pKa = 11.84LGRR931 pKa = 11.84RR932 pKa = 11.84VRR934 pKa = 11.84ASAPTKK940 pKa = 10.72NSS942 pKa = 3.05

Molecular weight: 105.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

942

942

942

942.0

105.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.873 ± 0.0

0.849 ± 0.0

3.822 ± 0.0

5.308 ± 0.0

2.866 ± 0.0

4.565 ± 0.0

1.805 ± 0.0

5.626 ± 0.0

6.157 ± 0.0

9.448 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.866 ± 0.0

3.503 ± 0.0

4.671 ± 0.0

3.715 ± 0.0

9.342 ± 0.0

7.431 ± 0.0

7.643 ± 0.0

7.006 ± 0.0

1.062 ± 0.0

2.442 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski