Acidianus two-tailed virus (ATV)

Taxonomy: Viruses; Bicaudaviridae; Bicaudavirus

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 72 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q3V4T4|Y059A_ATV Uncharacterized protein ORF59a OS=Acidianus two-tailed virus OX=315953 PE=4 SV=1
MM1 pKa = 7.39NCLEE5 pKa = 4.09ILISKK10 pKa = 8.82GYY12 pKa = 10.49NMQGYY17 pKa = 9.6SPDD20 pKa = 3.6TLLLLSEE27 pKa = 4.58KK28 pKa = 10.28EE29 pKa = 4.21GNDD32 pKa = 3.4VEE34 pKa = 4.63EE35 pKa = 4.9CEE37 pKa = 6.09AYY39 pKa = 10.46FSWLEE44 pKa = 3.8AVYY47 pKa = 10.64GG48 pKa = 3.85

Molecular weight: 5.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q3V4V9|Y059B_ATV Uncharacterized protein ORF59b OS=Acidianus two-tailed virus OX=315953 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 10.35VLSFLIRR9 pKa = 11.84QDD11 pKa = 3.13HH12 pKa = 6.7LLYY15 pKa = 10.82LDD17 pKa = 4.81IFAKK21 pKa = 10.39QNNLTRR27 pKa = 11.84SDD29 pKa = 4.17AIRR32 pKa = 11.84YY33 pKa = 7.73AISVLDD39 pKa = 4.01EE40 pKa = 4.2EE41 pKa = 4.77STPVSLVGFPGIKK54 pKa = 9.77LVRR57 pKa = 11.84TSVKK61 pKa = 10.06LAEE64 pKa = 4.24NVISRR69 pKa = 11.84IDD71 pKa = 3.28RR72 pKa = 11.84LAILSKK78 pKa = 9.49ITRR81 pKa = 11.84SDD83 pKa = 3.56VIRR86 pKa = 11.84NAIYY90 pKa = 10.45HH91 pKa = 6.35LLINNAPKK99 pKa = 10.16QLPPVTAQTEE109 pKa = 4.14KK110 pKa = 10.64KK111 pKa = 9.56YY112 pKa = 10.98GYY114 pKa = 9.03VCPYY118 pKa = 9.15CVSRR122 pKa = 11.84FPTVRR127 pKa = 11.84ALKK130 pKa = 8.94IHH132 pKa = 6.98LKK134 pKa = 9.86RR135 pKa = 11.84RR136 pKa = 11.84HH137 pKa = 6.39NGFPWCPVCYY147 pKa = 10.14KK148 pKa = 10.29PLKK151 pKa = 10.0NKK153 pKa = 9.98NATNHH158 pKa = 5.26FRR160 pKa = 11.84RR161 pKa = 11.84FTDD164 pKa = 3.62PQHH167 pKa = 5.95QFWYY171 pKa = 8.34MISRR175 pKa = 11.84KK176 pKa = 9.46RR177 pKa = 11.84YY178 pKa = 8.01LSSHH182 pKa = 6.05RR183 pKa = 11.84KK184 pKa = 8.47EE185 pKa = 4.12AVKK188 pKa = 10.47QQ189 pKa = 3.48

Molecular weight: 22.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

72

0

72

19264

34

1940

267.6

30.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.975 ± 0.317

0.54 ± 0.087

4.532 ± 0.423

7.283 ± 0.751

4.36 ± 0.317

5.248 ± 0.412

1.355 ± 0.244

7.413 ± 0.291

7.807 ± 0.653

9.619 ± 0.437

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.139 ± 0.17

5.347 ± 0.309

5.253 ± 0.546

4.033 ± 0.328

3.774 ± 0.446

6.868 ± 0.556

6.099 ± 0.575

6.759 ± 0.38

0.877 ± 0.127

4.719 ± 0.403
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski