Camelpox virus (strain CMS)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Camelpox virus

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 261 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q8QQ77|Q8QQ77_CAMPS CMP32L OS=Camelpox virus (strain CMS) OX=203172 GN=CMP32L PE=4 SV=1
MM1 pKa = 7.92DD2 pKa = 4.65NSMLPMFICNNIVDD16 pKa = 4.37YY17 pKa = 11.49VDD19 pKa = 5.93DD20 pKa = 5.27IDD22 pKa = 7.0DD23 pKa = 4.46IDD25 pKa = 6.7DD26 pKa = 4.29IDD28 pKa = 6.8DD29 pKa = 4.29IDD31 pKa = 6.97DD32 pKa = 4.88IDD34 pKa = 6.71DD35 pKa = 3.73IDD37 pKa = 3.96NGIVQDD43 pKa = 3.86IVQDD47 pKa = 3.84IEE49 pKa = 5.58DD50 pKa = 3.87EE51 pKa = 4.28ASNNDD56 pKa = 3.26DD57 pKa = 3.51HH58 pKa = 8.36NYY60 pKa = 10.23VYY62 pKa = 10.27PLPEE66 pKa = 3.83NMVYY70 pKa = 10.53RR71 pKa = 11.84FDD73 pKa = 3.76KK74 pKa = 10.0STNILDD80 pKa = 3.9YY81 pKa = 11.21LSTEE85 pKa = 4.1RR86 pKa = 11.84DD87 pKa = 3.57HH88 pKa = 10.24VMMAVQYY95 pKa = 10.31YY96 pKa = 8.63MSKK99 pKa = 10.26QRR101 pKa = 11.84LDD103 pKa = 3.35DD104 pKa = 4.85LYY106 pKa = 11.09RR107 pKa = 11.84QLPTKK112 pKa = 8.67TRR114 pKa = 11.84SYY116 pKa = 10.88IDD118 pKa = 4.43IINMYY123 pKa = 9.31CDD125 pKa = 3.99KK126 pKa = 11.33VNNDD130 pKa = 3.47YY131 pKa = 11.25NRR133 pKa = 11.84DD134 pKa = 3.51MNIMYY139 pKa = 10.73DD140 pKa = 3.5MASTEE145 pKa = 4.21SFTVYY150 pKa = 10.63DD151 pKa = 3.93INNEE155 pKa = 3.96VNTILIDD162 pKa = 3.78NKK164 pKa = 10.86GLGVRR169 pKa = 11.84LATISFITEE178 pKa = 4.16LGRR181 pKa = 11.84RR182 pKa = 11.84CMNPVEE188 pKa = 4.32TIKK191 pKa = 10.52MFTLLSHH198 pKa = 6.92TICDD202 pKa = 3.94DD203 pKa = 3.66CFVDD207 pKa = 4.46YY208 pKa = 9.46ITDD211 pKa = 3.65ISPPNNTISNTSTRR225 pKa = 11.84EE226 pKa = 3.74YY227 pKa = 10.72LKK229 pKa = 10.99LIGITAIMFATYY241 pKa = 7.95KK242 pKa = 8.27TLKK245 pKa = 10.56YY246 pKa = 10.15MIGG249 pKa = 3.33

Molecular weight: 28.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8QQ13|Q8QQ13_CAMPS CMP176.5aL OS=Camelpox virus (strain CMS) OX=203172 GN=CMP176.5aL PE=4 SV=1
MM1 pKa = 7.65LYY3 pKa = 10.11ISVRR7 pKa = 11.84KK8 pKa = 9.81KK9 pKa = 10.42RR10 pKa = 11.84ISNTHH15 pKa = 5.49VDD17 pKa = 2.95SSRR20 pKa = 11.84YY21 pKa = 8.66INLGRR26 pKa = 11.84RR27 pKa = 11.84LPRR30 pKa = 11.84HH31 pKa = 5.03TCALSKK37 pKa = 10.22WKK39 pKa = 10.47DD40 pKa = 3.52VAVLCLQIGQNHH52 pKa = 7.34GIWILVVSRR61 pKa = 11.84SILQMNGCHH70 pKa = 6.39LL71 pKa = 4.09

Molecular weight: 8.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

261

0

261

62949

53

1869

241.2

27.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.746 ± 0.115

2.13 ± 0.094

6.44 ± 0.112

5.117 ± 0.129

4.693 ± 0.129

3.937 ± 0.099

2.167 ± 0.087

9.665 ± 0.189

6.966 ± 0.117

9.003 ± 0.157

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.813 ± 0.086

6.901 ± 0.125

3.358 ± 0.102

2.2 ± 0.073

4.316 ± 0.11

8.181 ± 0.147

6.13 ± 0.139

6.132 ± 0.085

0.758 ± 0.041

5.347 ± 0.144
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski