bank vole virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Narmovirus; Myodes narmovirus

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4PJ44|A0A2H4PJ44_9MONO Attachment protein OS=bank vole virus 1 OX=2756244 GN=G PE=3 SV=1
MM1 pKa = 7.39SGVLSALKK9 pKa = 10.02EE10 pKa = 4.12FKK12 pKa = 10.03DD13 pKa = 3.25AKK15 pKa = 10.34LRR17 pKa = 11.84PKK19 pKa = 10.5HH20 pKa = 6.87DD21 pKa = 3.29GLTRR25 pKa = 11.84GAITSLKK32 pKa = 10.04HH33 pKa = 4.95KK34 pKa = 9.96VAVIVPGQEE43 pKa = 3.7GSKK46 pKa = 10.54VRR48 pKa = 11.84WQLLKK53 pKa = 11.14LLIGVAWSDD62 pKa = 3.2AANPSVQTGVMLSLISLISEE82 pKa = 4.21SPANMVRR89 pKa = 11.84RR90 pKa = 11.84LNNDD94 pKa = 3.08PDD96 pKa = 3.76LAITIVEE103 pKa = 3.91FTINSEE109 pKa = 4.08GEE111 pKa = 3.73LRR113 pKa = 11.84FASRR117 pKa = 11.84GMSYY121 pKa = 10.91DD122 pKa = 3.73DD123 pKa = 4.4QMSTYY128 pKa = 11.06LRR130 pKa = 11.84MRR132 pKa = 11.84DD133 pKa = 3.71NAPQAAQGEE142 pKa = 4.84HH143 pKa = 6.67PFEE146 pKa = 5.54EE147 pKa = 4.22SDD149 pKa = 4.03AWNQDD154 pKa = 3.88DD155 pKa = 5.66LPMDD159 pKa = 4.33EE160 pKa = 5.18YY161 pKa = 10.8MIANTTVQVQLWNLLIKK178 pKa = 10.59AVTAPDD184 pKa = 3.51TARR187 pKa = 11.84DD188 pKa = 3.61SEE190 pKa = 4.05QRR192 pKa = 11.84RR193 pKa = 11.84WLKK196 pKa = 9.9FVQQRR201 pKa = 11.84RR202 pKa = 11.84VEE204 pKa = 4.14AFYY207 pKa = 11.04KK208 pKa = 10.45LHH210 pKa = 6.82SIWADD215 pKa = 3.25KK216 pKa = 10.42VRR218 pKa = 11.84NLLAADD224 pKa = 4.28LSVRR228 pKa = 11.84RR229 pKa = 11.84YY230 pKa = 8.67MIRR233 pKa = 11.84TLIEE237 pKa = 3.86IQRR240 pKa = 11.84MGQTKK245 pKa = 9.91GRR247 pKa = 11.84LLEE250 pKa = 4.35VIADD254 pKa = 3.39IGNYY258 pKa = 9.27IEE260 pKa = 4.31EE261 pKa = 4.44SGLAGFQLTIRR272 pKa = 11.84YY273 pKa = 9.32GIEE276 pKa = 3.46TRR278 pKa = 11.84FAALALNEE286 pKa = 4.18FQGDD290 pKa = 3.56LATIEE295 pKa = 4.7RR296 pKa = 11.84LMKK299 pKa = 10.39LYY301 pKa = 11.16LEE303 pKa = 4.86MGPTAPFMVLLEE315 pKa = 5.44DD316 pKa = 3.55STQTKK321 pKa = 8.98FAPGNYY327 pKa = 8.46PLLWSYY333 pKa = 12.11AMGVGSALDD342 pKa = 3.12RR343 pKa = 11.84AMSNLNFNRR352 pKa = 11.84PYY354 pKa = 9.94MDD356 pKa = 2.96YY357 pKa = 11.0GYY359 pKa = 10.84FRR361 pKa = 11.84LGYY364 pKa = 9.84KK365 pKa = 9.74IVRR368 pKa = 11.84QSEE371 pKa = 4.17GSIDD375 pKa = 3.27SRR377 pKa = 11.84MANEE381 pKa = 5.13LEE383 pKa = 5.66LSPQDD388 pKa = 3.71QARR391 pKa = 11.84LRR393 pKa = 11.84ALVSGIGGRR402 pKa = 11.84EE403 pKa = 3.66DD404 pKa = 3.44VEE406 pKa = 4.49NIEE409 pKa = 4.12ARR411 pKa = 11.84GGNFQIADD419 pKa = 3.37IEE421 pKa = 4.51TTEE424 pKa = 4.08GEE426 pKa = 4.27EE427 pKa = 4.2LAGDD431 pKa = 4.03EE432 pKa = 4.22AQEE435 pKa = 4.05LPRR438 pKa = 11.84TRR440 pKa = 11.84RR441 pKa = 11.84TRR443 pKa = 11.84RR444 pKa = 11.84ARR446 pKa = 11.84SARR449 pKa = 11.84SSRR452 pKa = 11.84AQAGAGDD459 pKa = 5.02GININSYY466 pKa = 10.21SRR468 pKa = 11.84AVEE471 pKa = 3.72EE472 pKa = 4.24ALRR475 pKa = 11.84GSLTDD480 pKa = 5.25RR481 pKa = 11.84EE482 pKa = 4.46DD483 pKa = 3.3QSGDD487 pKa = 3.34QLYY490 pKa = 10.93NSPDD494 pKa = 3.3YY495 pKa = 9.79TRR497 pKa = 11.84EE498 pKa = 3.95MEE500 pKa = 4.23TEE502 pKa = 4.13EE503 pKa = 4.17EE504 pKa = 5.06DD505 pKa = 4.07EE506 pKa = 6.89DD507 pKa = 4.07EE508 pKa = 5.08GQDD511 pKa = 3.38NPLGLRR517 pKa = 11.84YY518 pKa = 9.7NDD520 pKa = 3.52EE521 pKa = 4.09SLLRR525 pKa = 4.7

Molecular weight: 59.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4PJ60|A0A2H4PJ60_9MONO Isoform of A0A2H4PJ62 C protein OS=bank vole virus 1 OX=2756244 GN=P\V\C PE=4 SV=1
MM1 pKa = 7.8PSKK4 pKa = 10.31LWKK7 pKa = 9.79SLKK10 pKa = 9.81KK11 pKa = 10.58LRR13 pKa = 11.84VPRR16 pKa = 11.84PRR18 pKa = 11.84NNSVPEE24 pKa = 4.3STSPTPTSHH33 pKa = 7.58DD34 pKa = 3.21QTTDD38 pKa = 3.03PEE40 pKa = 4.17VRR42 pKa = 11.84VRR44 pKa = 11.84IGVRR48 pKa = 11.84RR49 pKa = 11.84NPDD52 pKa = 2.97LVGVEE57 pKa = 4.13RR58 pKa = 11.84QTKK61 pKa = 8.25VLKK64 pKa = 10.26QDD66 pKa = 3.5LALVILTQLRR76 pKa = 11.84DD77 pKa = 3.6LEE79 pKa = 4.53KK80 pKa = 10.4DD81 pKa = 3.6YY82 pKa = 10.59PAQVPHH88 pKa = 7.45IITSLKK94 pKa = 10.18YY95 pKa = 9.44STLQFVKK102 pKa = 9.48TILMRR107 pKa = 11.84VMEE110 pKa = 4.64GLPINSTWVRR120 pKa = 11.84QVEE123 pKa = 4.5EE124 pKa = 4.68YY125 pKa = 10.36ICTTSQEE132 pKa = 4.2VQNLKK137 pKa = 10.54EE138 pKa = 3.84AVEE141 pKa = 4.42WVRR144 pKa = 11.84KK145 pKa = 8.5MMEE148 pKa = 4.28DD149 pKa = 3.51QDD151 pKa = 3.88RR152 pKa = 11.84TT153 pKa = 3.67

Molecular weight: 17.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

1

7

4962

153

2206

708.9

79.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.784 ± 0.68

1.653 ± 0.276

5.361 ± 0.446

5.482 ± 0.537

3.083 ± 0.51

5.744 ± 0.582

2.559 ± 0.517

7.517 ± 0.691

5.038 ± 0.573

10.238 ± 0.559

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.257 ± 0.314

5.28 ± 0.442

4.938 ± 0.461

3.99 ± 0.423

5.401 ± 0.59

8.283 ± 0.716

6.308 ± 0.67

5.865 ± 0.772

1.028 ± 0.247

4.152 ± 0.653
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski