Compostimonas suwonensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Microbacteriaceae; Compostimonas

Average proteome isoelectric point is 5.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3422 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2M9C599|A0A2M9C599_9MICO Uncharacterized protein OS=Compostimonas suwonensis OX=1048394 GN=CLV54_0748 PE=4 SV=1
MM1 pKa = 7.58PRR3 pKa = 11.84LLFAGVLTAALALSPLAAQAANPQPTDD30 pKa = 3.66PASSTSTPATEE41 pKa = 4.3STATEE46 pKa = 4.59TPTSTAVPTEE56 pKa = 3.97ASTADD61 pKa = 3.6PTPAPGEE68 pKa = 4.17TPAPSEE74 pKa = 4.12TPAPGEE80 pKa = 4.17LPAPPPPPQPTTGAPAPGEE99 pKa = 4.02QTGTGTPTEE108 pKa = 4.35QNGLTAPAPAPGSAQRR124 pKa = 11.84AAVGPHH130 pKa = 6.45SISGTVTRR138 pKa = 11.84AGGAPVTAADD148 pKa = 4.22SVWVSLIDD156 pKa = 3.53QSSSSLIASTTTAIDD171 pKa = 3.71GSYY174 pKa = 9.2TLSDD178 pKa = 3.76IPSGDD183 pKa = 3.64DD184 pKa = 3.0MVVQFGSGSGTLLGEE199 pKa = 4.57YY200 pKa = 10.53YY201 pKa = 10.76DD202 pKa = 4.92DD203 pKa = 4.45APSAFFAQAFTFTDD217 pKa = 4.01EE218 pKa = 4.36EE219 pKa = 4.55PQTLTGIDD227 pKa = 3.5AEE229 pKa = 4.36LALGSVISGHH239 pKa = 5.7VSGSDD244 pKa = 3.25GSSVDD249 pKa = 3.31GVYY252 pKa = 11.19VNIQRR257 pKa = 11.84VPSGSGNSFFGGQVEE272 pKa = 4.09ADD274 pKa = 3.31GDD276 pKa = 4.03YY277 pKa = 10.86SITGVAPGDD286 pKa = 3.63YY287 pKa = 9.86RR288 pKa = 11.84VTFSGTPGGLMGQYY302 pKa = 10.58YY303 pKa = 10.8DD304 pKa = 3.74GVYY307 pKa = 10.54DD308 pKa = 3.54QGSATLVTVAGNGQTVTGIDD328 pKa = 4.15AILDD332 pKa = 4.02PGSSVSGTVTRR343 pKa = 11.84NDD345 pKa = 3.25GGSFEE350 pKa = 4.41TSPVTVSVQPVDD362 pKa = 3.59NQGFSVDD369 pKa = 3.32ATVAADD375 pKa = 3.94GSYY378 pKa = 9.38TVDD381 pKa = 3.03GLAPGVYY388 pKa = 8.44TVQFRR393 pKa = 11.84PQEE396 pKa = 4.17EE397 pKa = 4.68GSNLILGYY405 pKa = 10.71YY406 pKa = 10.22GGTDD410 pKa = 2.73WSTAARR416 pKa = 11.84ITIGAGEE423 pKa = 4.13AQDD426 pKa = 4.11LVGYY430 pKa = 10.15DD431 pKa = 3.57FGMLLGNEE439 pKa = 3.78ISGQITRR446 pKa = 11.84ADD448 pKa = 3.63GEE450 pKa = 4.04PWEE453 pKa = 4.44EE454 pKa = 3.75FRR456 pKa = 11.84TPQVIVEE463 pKa = 4.17EE464 pKa = 4.44WDD466 pKa = 3.71GSSTSVTSTSMEE478 pKa = 3.94ADD480 pKa = 2.94GSYY483 pKa = 10.33AVHH486 pKa = 6.98GIAPGSYY493 pKa = 7.62RR494 pKa = 11.84VKK496 pKa = 11.02FEE498 pKa = 4.05GSYY501 pKa = 11.15SDD503 pKa = 4.23DD504 pKa = 3.1AFGFVWYY511 pKa = 9.88DD512 pKa = 3.54DD513 pKa = 4.81VIDD516 pKa = 4.75PSAAHH521 pKa = 5.39QFVFGSDD528 pKa = 3.56PQVVTGIDD536 pKa = 3.63GQLSQASSVSGTVTRR551 pKa = 11.84SDD553 pKa = 3.15GKK555 pKa = 9.91PIEE558 pKa = 4.44EE559 pKa = 4.05NTFVSLEE566 pKa = 4.22LPGSGYY572 pKa = 10.04IAASTQVRR580 pKa = 11.84ADD582 pKa = 3.05GSYY585 pKa = 10.61RR586 pKa = 11.84FDD588 pKa = 3.16KK589 pKa = 9.61VTPRR593 pKa = 11.84DD594 pKa = 3.46YY595 pKa = 11.13VVRR598 pKa = 11.84FGGTDD603 pKa = 3.14HH604 pKa = 7.07VRR606 pKa = 11.84EE607 pKa = 3.92QYY609 pKa = 11.05YY610 pKa = 10.41PDD612 pKa = 3.27VQYY615 pKa = 11.16SYY617 pKa = 10.59EE618 pKa = 4.06ATILTVTEE626 pKa = 4.39EE627 pKa = 4.37PLTGIDD633 pKa = 3.32ATLTAGAPVTGTVTRR648 pKa = 11.84SDD650 pKa = 4.03GAPIDD655 pKa = 3.82YY656 pKa = 9.76TSIAVYY662 pKa = 9.96AYY664 pKa = 10.46DD665 pKa = 3.86ADD667 pKa = 3.82YY668 pKa = 10.97RR669 pKa = 11.84QAGSTWVNTDD679 pKa = 2.63GSYY682 pKa = 10.7KK683 pKa = 10.16IPALAAGNYY692 pKa = 8.86RR693 pKa = 11.84FQFTPLGTGNPVVPSWWDD711 pKa = 3.29GKK713 pKa = 11.19ASFEE717 pKa = 4.11QADD720 pKa = 4.32AVTMPSTLEE729 pKa = 3.88AVTGIDD735 pKa = 3.16TEE737 pKa = 5.15LIVGTTASGHH747 pKa = 4.96VVDD750 pKa = 5.41PNGDD754 pKa = 3.51PVANTSVSFAGADD767 pKa = 3.26GRR769 pKa = 11.84YY770 pKa = 10.46GYY772 pKa = 8.33GTTNADD778 pKa = 2.43GDD780 pKa = 4.2YY781 pKa = 10.24TVYY784 pKa = 11.18GLADD788 pKa = 3.54GDD790 pKa = 4.13YY791 pKa = 9.62TVQFSTWDD799 pKa = 2.98TGLIGEE805 pKa = 4.87YY806 pKa = 10.26YY807 pKa = 10.78DD808 pKa = 4.8DD809 pKa = 5.13ARR811 pKa = 11.84TVDD814 pKa = 4.09DD815 pKa = 3.85ATLVTVEE822 pKa = 4.01NAEE825 pKa = 4.16PVTGIDD831 pKa = 3.24AALEE835 pKa = 3.99QGSTISGTVTRR846 pKa = 11.84ADD848 pKa = 3.52GGSLADD854 pKa = 3.56CAVRR858 pKa = 11.84VSLVRR863 pKa = 11.84DD864 pKa = 3.89APPSQSGDD872 pKa = 3.03GGEE875 pKa = 4.84CVDD878 pKa = 4.57ADD880 pKa = 3.5GGYY883 pKa = 10.52AIDD886 pKa = 5.93GIAPDD891 pKa = 3.73RR892 pKa = 11.84YY893 pKa = 8.59FVAFGGEE900 pKa = 4.12GLATQWFDD908 pKa = 3.69DD909 pKa = 3.72VSVRR913 pKa = 11.84ADD915 pKa = 3.29ATVLEE920 pKa = 4.79FVEE923 pKa = 4.87GEE925 pKa = 4.03PRR927 pKa = 11.84DD928 pKa = 3.87EE929 pKa = 4.37TGVDD933 pKa = 3.56AEE935 pKa = 4.47LQPGGSITASATRR948 pKa = 11.84SDD950 pKa = 4.16GGSLDD955 pKa = 3.52AVTVEE960 pKa = 4.91AVLADD965 pKa = 3.89GGTVVYY971 pKa = 10.45SRR973 pKa = 11.84AVGSYY978 pKa = 9.27EE979 pKa = 3.85PQFTLSGLPLDD990 pKa = 4.54RR991 pKa = 11.84YY992 pKa = 10.19LLRR995 pKa = 11.84FSAPGLPTQYY1005 pKa = 10.9YY1006 pKa = 9.08GGADD1010 pKa = 3.19AGSATVVDD1018 pKa = 4.99LTTEE1022 pKa = 4.07PDD1024 pKa = 3.11ATGIAVALAAASTAALEE1041 pKa = 4.34VTRR1044 pKa = 11.84GGGEE1048 pKa = 4.2TVTAGQTLAALAVTVVDD1065 pKa = 4.3GAGEE1069 pKa = 3.88PVYY1072 pKa = 10.69GKK1074 pKa = 10.02RR1075 pKa = 11.84VVFTVSGAATFAGGATTATAPSNSAGLAVSPALLSGEE1112 pKa = 4.26TAGTVTASARR1122 pKa = 11.84ISGVSGSSVAFDD1134 pKa = 3.8PSTVRR1139 pKa = 11.84DD1140 pKa = 3.93AQDD1143 pKa = 3.19GAGDD1147 pKa = 4.14LSVTTTATTSLEE1159 pKa = 3.86NGLAVLTVTVLNSGPAAADD1178 pKa = 3.51LRR1180 pKa = 11.84ITTPFGAKK1188 pKa = 9.19TYY1190 pKa = 10.31TNVAPGAEE1198 pKa = 4.05ATRR1201 pKa = 11.84VFRR1204 pKa = 11.84SYY1206 pKa = 10.57RR1207 pKa = 11.84ASVDD1211 pKa = 3.43DD1212 pKa = 3.68GTVTVRR1218 pKa = 11.84VTDD1221 pKa = 3.73PVGGHH1226 pKa = 6.48SIDD1229 pKa = 3.59ISTDD1233 pKa = 3.41YY1234 pKa = 11.39EE1235 pKa = 4.52GVEE1238 pKa = 4.15LL1239 pKa = 5.16

Molecular weight: 126.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2M9C4F9|A0A2M9C4F9_9MICO Signal transduction histidine kinase OS=Compostimonas suwonensis OX=1048394 GN=CLV54_0448 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AKK15 pKa = 9.45VHH17 pKa = 5.31GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILSARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.98GRR40 pKa = 11.84TEE42 pKa = 3.99LSAA45 pKa = 4.86

Molecular weight: 5.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3422

0

3422

1170212

29

4639

342.0

36.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.998 ± 0.056

0.465 ± 0.01

6.15 ± 0.043

5.657 ± 0.037

3.169 ± 0.023

9.129 ± 0.043

1.872 ± 0.023

4.619 ± 0.036

1.857 ± 0.026

10.06 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.656 ± 0.019

2.154 ± 0.028

5.523 ± 0.035

2.846 ± 0.023

6.84 ± 0.057

6.249 ± 0.034

6.313 ± 0.051

8.879 ± 0.038

1.473 ± 0.016

2.092 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski