Alternaria alternata fusarivirus 1

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 7.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z6DR81|A0A2Z6DR81_9VIRU Uncharacterized protein OS=Alternaria alternata fusarivirus 1 OX=1935440 PE=4 SV=1
MM1 pKa = 7.48KK2 pKa = 10.26LVLLIRR8 pKa = 11.84PNPEE12 pKa = 3.22EE13 pKa = 4.08EE14 pKa = 4.15EE15 pKa = 4.3AVGSRR20 pKa = 11.84WCWKK24 pKa = 9.45HH25 pKa = 5.31PPYY28 pKa = 10.8VLSLSGTGFMSVRR41 pKa = 11.84GGGRR45 pKa = 11.84CAVRR49 pKa = 11.84AEE51 pKa = 4.09MFGNPEE57 pKa = 4.23CNDD60 pKa = 3.46CEE62 pKa = 4.51LFTRR66 pKa = 11.84FSS68 pKa = 3.37

Molecular weight: 7.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z6DR81|A0A2Z6DR81_9VIRU Uncharacterized protein OS=Alternaria alternata fusarivirus 1 OX=1935440 PE=4 SV=1
MM1 pKa = 7.21TSEE4 pKa = 4.37KK5 pKa = 10.75VFIGKK10 pKa = 10.04RR11 pKa = 11.84IVQTRR16 pKa = 11.84EE17 pKa = 3.3QLSQVEE23 pKa = 4.1LTAQQVKK30 pKa = 10.47SSTVWLVRR38 pKa = 11.84EE39 pKa = 4.29PGWVSGQEE47 pKa = 4.03KK48 pKa = 10.43LNGWFLEE55 pKa = 4.26VEE57 pKa = 4.09GTDD60 pKa = 3.0IVLCVTTLFKK70 pKa = 11.58GEE72 pKa = 4.18VTSEE76 pKa = 3.5RR77 pKa = 11.84WFPPSPVFKK86 pKa = 10.0WKK88 pKa = 10.39KK89 pKa = 9.02EE90 pKa = 3.85YY91 pKa = 10.14QSRR94 pKa = 11.84DD95 pKa = 3.15KK96 pKa = 10.94EE97 pKa = 4.55VPTEE101 pKa = 3.81VAYY104 pKa = 10.2KK105 pKa = 9.68NVIVARR111 pKa = 11.84MADD114 pKa = 3.87EE115 pKa = 4.52NLLGYY120 pKa = 10.93YY121 pKa = 10.95DD122 pKa = 4.64MLTPATPLVNRR133 pKa = 11.84LSASFKK139 pKa = 8.0WWKK142 pKa = 8.96TGGNAPIIPFSPTNSKK158 pKa = 10.78KK159 pKa = 10.64EE160 pKa = 3.72IIGRR164 pKa = 11.84ISHH167 pKa = 7.03FEE169 pKa = 3.76TSFAALVNPPEE180 pKa = 4.12FALDD184 pKa = 3.3GLLALRR190 pKa = 11.84VLKK193 pKa = 10.71DD194 pKa = 3.4QLPSMKK200 pKa = 10.31DD201 pKa = 2.56RR202 pKa = 11.84GTQNVSRR209 pKa = 11.84FLTTLVKK216 pKa = 10.09AWAMSKK222 pKa = 10.14QPSHH226 pKa = 7.01FKK228 pKa = 11.08GPLSKK233 pKa = 9.93ISYY236 pKa = 8.93PVEE239 pKa = 4.42KK240 pKa = 10.46DD241 pKa = 3.14GLPADD246 pKa = 4.22RR247 pKa = 11.84AKK249 pKa = 10.07MYY251 pKa = 11.0HH252 pKa = 6.41NMICGKK258 pKa = 10.06GDD260 pKa = 3.84EE261 pKa = 4.36ITRR264 pKa = 11.84GLGFCMWTPPRR275 pKa = 11.84ITVTTDD281 pKa = 2.66AEE283 pKa = 4.69GFTTKK288 pKa = 9.8SRR290 pKa = 11.84KK291 pKa = 8.54KK292 pKa = 9.84HH293 pKa = 4.62EE294 pKa = 4.46EE295 pKa = 3.73KK296 pKa = 10.72KK297 pKa = 10.8IMLDD301 pKa = 3.97LGPDD305 pKa = 3.41IQVGGPNEE313 pKa = 3.8TRR315 pKa = 11.84LRR317 pKa = 11.84EE318 pKa = 3.92EE319 pKa = 4.41SEE321 pKa = 4.45AEE323 pKa = 4.06SSAMGARR330 pKa = 11.84RR331 pKa = 11.84QHH333 pKa = 5.91AKK335 pKa = 10.53KK336 pKa = 10.62NSDD339 pKa = 3.47PDD341 pKa = 3.54NGGFNPTSKK350 pKa = 10.35VSQKK354 pKa = 11.03DD355 pKa = 3.5QVSEE359 pKa = 4.22DD360 pKa = 3.88AVDD363 pKa = 5.64DD364 pKa = 3.94ATDD367 pKa = 3.19WLRR370 pKa = 11.84NSFTMTNFRR379 pKa = 11.84RR380 pKa = 11.84FYY382 pKa = 10.38RR383 pKa = 11.84RR384 pKa = 11.84VKK386 pKa = 10.49RR387 pKa = 11.84SVSSIKK393 pKa = 10.69DD394 pKa = 3.55SVTHH398 pKa = 6.19EE399 pKa = 4.08GVGIKK404 pKa = 10.38KK405 pKa = 10.07PFTEE409 pKa = 4.14KK410 pKa = 10.95AKK412 pKa = 10.48DD413 pKa = 3.4AVVFTVTSAVKK424 pKa = 10.34ACATVPFAGAMGLWYY439 pKa = 10.12GIKK442 pKa = 10.36EE443 pKa = 4.04PFVSIKK449 pKa = 10.2EE450 pKa = 4.05FPFPEE455 pKa = 4.49GRR457 pKa = 11.84LEE459 pKa = 4.24VAKK462 pKa = 10.58HH463 pKa = 4.96VADD466 pKa = 3.77CAVYY470 pKa = 10.1SLSSVVTSTISGVFAGLASATRR492 pKa = 3.68

Molecular weight: 54.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

2082

68

1522

694.0

78.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.676 ± 0.289

0.768 ± 0.715

4.947 ± 0.515

6.052 ± 0.735

5.235 ± 0.089

5.956 ± 0.781

1.873 ± 0.247

4.947 ± 0.736

6.532 ± 0.919

9.99 ± 1.786

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.738 ± 0.21

3.65 ± 0.275

4.803 ± 0.641

2.546 ± 0.304

6.196 ± 0.382

7.589 ± 0.357

6.724 ± 0.495

7.541 ± 0.584

2.45 ± 0.1

2.786 ± 0.56
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski