Maribacter sp. T28

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3578 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B7Z8K2|A0A1B7Z8K2_9FLAO Rhomboid family intramembrane serine protease OS=Maribacter sp. T28 OX=1836467 GN=A9200_04285 PE=4 SV=1
MM1 pKa = 7.48RR2 pKa = 11.84TLLSCILFLCITLSYY17 pKa = 9.77SQSEE21 pKa = 5.41FITTWKK27 pKa = 8.84TDD29 pKa = 3.68NPGSTAPNSIVIPTYY44 pKa = 10.09PGEE47 pKa = 4.4TYY49 pKa = 10.37DD50 pKa = 4.06YY51 pKa = 10.4TVDD54 pKa = 3.32WGDD57 pKa = 3.46GTIEE61 pKa = 5.27SNLTDD66 pKa = 3.94NAIHH70 pKa = 6.77TYY72 pKa = 7.79ATPGIYY78 pKa = 9.97SVAISGTFPRR88 pKa = 11.84IYY90 pKa = 10.41FNNSGDD96 pKa = 3.78KK97 pKa = 10.7EE98 pKa = 4.14KK99 pKa = 11.03LILVNQWGSTNWSSMEE115 pKa = 4.11KK116 pKa = 10.55AFSGCINLDD125 pKa = 3.41VVATDD130 pKa = 3.5TPNFLGVNDD139 pKa = 4.94LSYY142 pKa = 11.32LFNGCTSLVGNNSFSNWNTSNVNNMRR168 pKa = 11.84AVFTDD173 pKa = 3.24TDD175 pKa = 4.21SFNQDD180 pKa = 2.22IGSWDD185 pKa = 3.41TSEE188 pKa = 4.46VINMAEE194 pKa = 3.96LFKK197 pKa = 11.04NSKK200 pKa = 10.15SFNQDD205 pKa = 1.97IGNWNISSVTNLAATFNGAILFNQNIGNWDD235 pKa = 3.43VSSVEE240 pKa = 4.03VFLGTFANAQNFNQNIGDD258 pKa = 3.92WDD260 pKa = 3.75VSAATDD266 pKa = 3.59MAGMFSNAISFNQDD280 pKa = 1.79IGRR283 pKa = 11.84WDD285 pKa = 3.36VSKK288 pKa = 10.81VKK290 pKa = 10.72RR291 pKa = 11.84MINMFNFAISFNQNIGFWNVSNVTSMNSMFYY322 pKa = 10.4NAQNFNQTLSYY333 pKa = 9.95WNVSNVEE340 pKa = 4.1NMNSMFDD347 pKa = 3.26RR348 pKa = 11.84ASNFDD353 pKa = 3.41QNLGYY358 pKa = 10.4WNISKK363 pKa = 8.23VTDD366 pKa = 3.82LEE368 pKa = 4.59YY369 pKa = 10.51MFSNAGLSTYY379 pKa = 10.92NYY381 pKa = 10.05DD382 pKa = 3.22ATLNGWAQLPILQSNLTFDD401 pKa = 4.18AGNSRR406 pKa = 11.84YY407 pKa = 9.82CFSEE411 pKa = 3.86TSRR414 pKa = 11.84NKK416 pKa = 10.42LLNDD420 pKa = 4.15LSWIINDD427 pKa = 3.34AGKK430 pKa = 9.95NLDD433 pKa = 4.24CKK435 pKa = 10.86PEE437 pKa = 4.15LFTTLWKK444 pKa = 9.45TDD446 pKa = 3.32NSGSSGDD453 pKa = 3.77NQITIPTFSGEE464 pKa = 4.02AYY466 pKa = 10.38NYY468 pKa = 7.79TVYY471 pKa = 10.19WGDD474 pKa = 3.43GTVSSNVTGNITHH487 pKa = 7.39TYY489 pKa = 8.38YY490 pKa = 10.81EE491 pKa = 4.27PGAYY495 pKa = 8.8QVSIEE500 pKa = 4.17GAFPRR505 pKa = 11.84IYY507 pKa = 10.62FNEE510 pKa = 4.03TGDD513 pKa = 3.53RR514 pKa = 11.84EE515 pKa = 4.32KK516 pKa = 10.67ILEE519 pKa = 4.1VKK521 pKa = 9.8QWGDD525 pKa = 3.33VSWNSMEE532 pKa = 4.38SAFAGCSNLSVAANDD547 pKa = 3.65VPNLSNTTSLKK558 pKa = 10.73RR559 pKa = 11.84MFLNCGYY566 pKa = 10.73AFDD569 pKa = 4.21FTRR572 pKa = 11.84SRR574 pKa = 11.84EE575 pKa = 3.79YY576 pKa = 11.13RR577 pKa = 11.84NFNGIEE583 pKa = 4.17NFNSWDD589 pKa = 3.34VSTITDD595 pKa = 3.66MSNMFDD601 pKa = 3.42KK602 pKa = 11.22SSFNQDD608 pKa = 1.91ISQWNVSNVTDD619 pKa = 3.79ISYY622 pKa = 10.48IFYY625 pKa = 10.4SSPFNFEE632 pKa = 3.47VSNWDD637 pKa = 3.17VSSVVNMQGVFGSSNFNKK655 pKa = 10.13SVSSWDD661 pKa = 3.37VSNVTNMDD669 pKa = 3.37YY670 pKa = 10.66MFNSTNFDD678 pKa = 3.13QDD680 pKa = 2.88ISSWNVSNVTSMRR693 pKa = 11.84NMLSQGSFNQDD704 pKa = 2.0ISSWNVSNVLDD715 pKa = 3.85MSNIFDD721 pKa = 5.23DD722 pKa = 4.09NDD724 pKa = 3.45LSRR727 pKa = 11.84EE728 pKa = 4.09NYY730 pKa = 10.36DD731 pKa = 3.8KK732 pKa = 11.04ILIEE736 pKa = 4.19WSLLPNLQNGIQLGAKK752 pKa = 9.51DD753 pKa = 3.7VQFCLGKK760 pKa = 10.13DD761 pKa = 3.24ARR763 pKa = 11.84DD764 pKa = 3.36ILTTIHH770 pKa = 6.07NWNIIDD776 pKa = 3.51QGEE779 pKa = 4.24NCEE782 pKa = 4.1EE783 pKa = 3.78EE784 pKa = 4.72RR785 pKa = 11.84PFVTTWKK792 pKa = 8.9TDD794 pKa = 3.22NPGFSDD800 pKa = 3.6NNQITIPTNPNKK812 pKa = 10.17VYY814 pKa = 10.46LYY816 pKa = 10.76NVDD819 pKa = 3.38WGDD822 pKa = 3.43GTFDD826 pKa = 3.21ISVTKK831 pKa = 10.44DD832 pKa = 2.67ITHH835 pKa = 7.07TYY837 pKa = 9.49VEE839 pKa = 4.6PGTYY843 pKa = 9.08QVSISGRR850 pKa = 11.84FPHH853 pKa = 7.52IYY855 pKa = 10.11FNNSGEE861 pKa = 4.6DD862 pKa = 3.89YY863 pKa = 10.7PHH865 pKa = 6.41QAPKK869 pKa = 9.1NTSDD873 pKa = 3.1IEE875 pKa = 4.32KK876 pKa = 10.08IISIDD881 pKa = 3.11QWGTNRR887 pKa = 11.84WISMAFAFAGCSNLDD902 pKa = 3.49VLATDD907 pKa = 4.21IPDD910 pKa = 3.79FSKK913 pKa = 11.16DD914 pKa = 2.83IDD916 pKa = 4.07LSFMFYY922 pKa = 10.81GCSSLKK928 pKa = 10.69GNEE931 pKa = 4.27SMEE934 pKa = 4.12LWDD937 pKa = 5.25LSDD940 pKa = 3.35ITMSTPSMFSGAIQFNQSLGNWDD963 pKa = 3.48VSNIRR968 pKa = 11.84YY969 pKa = 9.04LDD971 pKa = 3.34RR972 pKa = 11.84MFEE975 pKa = 4.03NAISFNQNLEE985 pKa = 3.5NWDD988 pKa = 3.33IGKK991 pKa = 9.51VEE993 pKa = 4.49NMDD996 pKa = 3.76AMFNGSGISIANYY1009 pKa = 10.09DD1010 pKa = 3.84RR1011 pKa = 11.84LLNAWSTLPSLVNNVNLGAADD1032 pKa = 3.88TNFCNSTEE1040 pKa = 3.82ARR1042 pKa = 11.84QNLIDD1047 pKa = 3.65TYY1049 pKa = 10.94GWQITDD1055 pKa = 3.93AGNDD1059 pKa = 3.34CSGTYY1064 pKa = 10.43FITTWKK1070 pKa = 8.6TDD1072 pKa = 3.32NPGISADD1079 pKa = 3.77NQITIPTFPSEE1090 pKa = 4.26TYY1092 pKa = 10.02DD1093 pKa = 4.06YY1094 pKa = 11.18SVNWGDD1100 pKa = 5.26GNIEE1104 pKa = 4.59SNFIGDD1110 pKa = 3.56ATHH1113 pKa = 7.3TYY1115 pKa = 7.63LTPGTYY1121 pKa = 9.15QVSISGVFPRR1131 pKa = 11.84IFFNNFDD1138 pKa = 4.09GTSSDD1143 pKa = 3.04SDD1145 pKa = 3.84KK1146 pKa = 10.98IISVDD1151 pKa = 3.06QWGDD1155 pKa = 3.58IEE1157 pKa = 4.38WTSMNNAFTNCTNLNVVAIDD1177 pKa = 3.66IPNLEE1182 pKa = 4.43NVNSLGAMFRR1192 pKa = 11.84FCDD1195 pKa = 3.59SLIGNEE1201 pKa = 5.09SFSKK1205 pKa = 9.71WQVKK1209 pKa = 9.97SINFFDD1215 pKa = 4.21FLFDD1219 pKa = 3.63GASQFNQYY1227 pKa = 9.17IGNWDD1232 pKa = 3.43VSNATNMSYY1241 pKa = 9.69MFNNATIFDD1250 pKa = 3.87QDD1252 pKa = 3.04ITNWDD1257 pKa = 3.64ISNVDD1262 pKa = 3.69HH1263 pKa = 7.19IGLMFANTKK1272 pKa = 10.29AFNQPIGNWNMSNLTSLQAIFAGASAFNQDD1302 pKa = 2.5ISSWDD1307 pKa = 3.43VSNVTNMEE1315 pKa = 3.93GMFSGAISFNQDD1327 pKa = 1.81ISNWDD1332 pKa = 3.45VSNVTTMNSMFPGAISFNSPLNSWDD1357 pKa = 3.51VSSVTDD1363 pKa = 3.51MTAMFDD1369 pKa = 3.43GATSFNRR1376 pKa = 11.84PLNNWNISNVTQISSMFVNATSFNQPLDD1404 pKa = 3.32NWDD1407 pKa = 3.57VSNVTSLAGMFLKK1420 pKa = 10.75ASSFNQNLSNWDD1432 pKa = 3.23ISNVTSIGGMFNQAISYY1449 pKa = 8.31DD1450 pKa = 3.92QNLGDD1455 pKa = 3.87WDD1457 pKa = 3.74VSKK1460 pKa = 10.57IINMDD1465 pKa = 3.56YY1466 pKa = 10.75LFNGIGLSLDD1476 pKa = 4.16NYY1478 pKa = 11.16DD1479 pKa = 3.65KK1480 pKa = 11.2TLTGWANLPSLQNNVVFDD1498 pKa = 4.07AANSKK1503 pKa = 10.46YY1504 pKa = 10.41CEE1506 pKa = 4.26SEE1508 pKa = 3.77NARR1511 pKa = 11.84QSIIDD1516 pKa = 3.64TFGWTINDD1524 pKa = 3.39FGKK1527 pKa = 10.81VPFCNEE1533 pKa = 4.0DD1534 pKa = 3.26NDD1536 pKa = 4.4LDD1538 pKa = 5.31GILDD1542 pKa = 4.17HH1543 pKa = 7.43KK1544 pKa = 10.93DD1545 pKa = 3.03SCLDD1549 pKa = 3.16TRR1551 pKa = 11.84PNVTVNDD1558 pKa = 3.97NGCEE1562 pKa = 3.95IIVANAILVYY1572 pKa = 9.99GASPTCPGEE1581 pKa = 4.03ANGTIEE1587 pKa = 4.95ISSNLINYY1595 pKa = 7.49GFNISIEE1602 pKa = 4.38GPVSFDD1608 pKa = 3.39YY1609 pKa = 11.72NEE1611 pKa = 3.82ISLNNNLEE1619 pKa = 4.01VSNLTTGMYY1628 pKa = 8.83TVTIAIPDD1636 pKa = 3.35ISYY1639 pKa = 9.51VQTYY1643 pKa = 9.03GIQINEE1649 pKa = 3.93VDD1651 pKa = 3.98TISGKK1656 pKa = 10.19RR1657 pKa = 11.84EE1658 pKa = 3.87NLNTSAKK1665 pKa = 7.61TALYY1669 pKa = 9.99NVEE1672 pKa = 3.62GSYY1675 pKa = 11.17NYY1677 pKa = 9.7TVDD1680 pKa = 4.19VNGEE1684 pKa = 3.95LKK1686 pKa = 10.78NYY1688 pKa = 9.8NFTSNGVNEE1697 pKa = 4.41IQLSDD1702 pKa = 3.59LGEE1705 pKa = 4.3INTISISGEE1714 pKa = 3.72SDD1716 pKa = 3.44CQGKK1720 pKa = 7.96VTDD1723 pKa = 4.79SFAFTDD1729 pKa = 4.14GLIMYY1734 pKa = 7.35PTITTGEE1741 pKa = 4.3VFVEE1745 pKa = 4.89GCDD1748 pKa = 3.48EE1749 pKa = 4.3SSTVLVYY1756 pKa = 10.69DD1757 pKa = 3.61LSGRR1761 pKa = 11.84LVFSKK1766 pKa = 9.57TLSPQDD1772 pKa = 3.86SNSIDD1777 pKa = 3.23IQALEE1782 pKa = 4.14TGVYY1786 pKa = 10.27PMVIQSKK1793 pKa = 9.87EE1794 pKa = 3.57NSKK1797 pKa = 8.08TFKK1800 pKa = 10.33IIKK1803 pKa = 8.78QQ1804 pKa = 3.43

Molecular weight: 201.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B7Z1R9|A0A1B7Z1R9_9FLAO LPS export ABC transporter ATP-binding protein OS=Maribacter sp. T28 OX=1836467 GN=A9200_09685 PE=4 SV=1
MM1 pKa = 7.02YY2 pKa = 10.31LVRR5 pKa = 11.84KK6 pKa = 10.0INFTDD11 pKa = 2.98NGQRR15 pKa = 11.84TTDD18 pKa = 3.03NGQRR22 pKa = 11.84TTDD25 pKa = 3.03NGQRR29 pKa = 11.84TTDD32 pKa = 3.03NGQRR36 pKa = 11.84TTDD39 pKa = 3.03NGQRR43 pKa = 11.84TTDD46 pKa = 3.03NGQRR50 pKa = 11.84TTDD53 pKa = 3.03NGQRR57 pKa = 11.84TTDD60 pKa = 3.03NGQRR64 pKa = 11.84TTDD67 pKa = 3.03NGQRR71 pKa = 11.84TTDD74 pKa = 3.03NGQRR78 pKa = 11.84TTDD81 pKa = 3.03NGQRR85 pKa = 11.84TTDD88 pKa = 3.03NGQRR92 pKa = 11.84TTDD95 pKa = 3.03NGQRR99 pKa = 11.84TTDD102 pKa = 3.03NGQRR106 pKa = 11.84TTDD109 pKa = 3.03NGQRR113 pKa = 11.84TTDD116 pKa = 3.03NGQRR120 pKa = 11.84TTDD123 pKa = 3.03NGQRR127 pKa = 11.84TTDD130 pKa = 3.03NGQRR134 pKa = 11.84TTDD137 pKa = 3.03NGQRR141 pKa = 11.84TTDD144 pKa = 3.03NGQRR148 pKa = 11.84TTDD151 pKa = 3.03NGQRR155 pKa = 11.84TTDD158 pKa = 3.03NGQRR162 pKa = 11.84TTDD165 pKa = 3.03NGQRR169 pKa = 11.84TTDD172 pKa = 3.03NGQRR176 pKa = 11.84TTDD179 pKa = 3.03NGQRR183 pKa = 11.84TTDD186 pKa = 3.03NGQRR190 pKa = 11.84TTDD193 pKa = 3.03NGQRR197 pKa = 11.84TTDD200 pKa = 3.03NGQRR204 pKa = 11.84TTDD207 pKa = 3.03NGQRR211 pKa = 11.84TTDD214 pKa = 3.03NGQRR218 pKa = 11.84TTDD221 pKa = 3.03NGQRR225 pKa = 11.84KK226 pKa = 8.83ARR228 pKa = 11.84FNLKK232 pKa = 10.45LILNLRR238 pKa = 11.84LYY240 pKa = 10.82

Molecular weight: 26.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3578

0

3578

1244144

42

3735

347.7

39.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.336 ± 0.035

0.71 ± 0.013

5.661 ± 0.033

6.676 ± 0.03

5.157 ± 0.031

6.572 ± 0.041

1.723 ± 0.018

7.978 ± 0.045

7.654 ± 0.053

9.418 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.286 ± 0.023

6.226 ± 0.045

3.418 ± 0.022

3.215 ± 0.02

3.319 ± 0.023

6.536 ± 0.03

5.837 ± 0.045

6.197 ± 0.033

1.098 ± 0.015

3.985 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski