Pteropus associated gemycircularvirus 10

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus ptero10

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTL6|A0A140CTL6_9VIRU RepA OS=Pteropus associated gemycircularvirus 10 OX=1985404 PE=3 SV=1
MM1 pKa = 7.44TFHH4 pKa = 7.09FSARR8 pKa = 11.84YY9 pKa = 9.48VLLTYY14 pKa = 10.06AQSGDD19 pKa = 3.41LSEE22 pKa = 4.41WSVLDD27 pKa = 4.62HH28 pKa = 6.79ISSLGAEE35 pKa = 4.41CIVARR40 pKa = 11.84EE41 pKa = 4.04DD42 pKa = 3.46HH43 pKa = 6.99ADD45 pKa = 3.7GGTHH49 pKa = 6.54LHH51 pKa = 5.76VFCDD55 pKa = 5.07FGRR58 pKa = 11.84KK59 pKa = 8.32KK60 pKa = 10.15QSRR63 pKa = 11.84RR64 pKa = 11.84PDD66 pKa = 3.36YY67 pKa = 10.83FDD69 pKa = 4.99VEE71 pKa = 4.4GHH73 pKa = 6.6HH74 pKa = 6.71PNIVPSRR81 pKa = 11.84GRR83 pKa = 11.84AGEE86 pKa = 4.02GWDD89 pKa = 3.56YY90 pKa = 10.72ATKK93 pKa = 10.53DD94 pKa = 3.54GNIVAGGLEE103 pKa = 4.1RR104 pKa = 11.84PGGGGLPSTPDD115 pKa = 2.6KK116 pKa = 10.39WRR118 pKa = 11.84EE119 pKa = 3.61IVGAEE124 pKa = 3.82SRR126 pKa = 11.84EE127 pKa = 3.99EE128 pKa = 4.19FFDD131 pKa = 5.34LLRR134 pKa = 11.84QLDD137 pKa = 4.38PKK139 pKa = 10.33TLITRR144 pKa = 11.84WSEE147 pKa = 3.6LNRR150 pKa = 11.84YY151 pKa = 9.13ADD153 pKa = 3.12AAYY156 pKa = 7.63ATRR159 pKa = 11.84AEE161 pKa = 4.79PYY163 pKa = 9.97VGPTGIEE170 pKa = 4.16FEE172 pKa = 4.44LGMVPEE178 pKa = 4.37LARR181 pKa = 11.84WGRR184 pKa = 11.84EE185 pKa = 3.75LPVLYY190 pKa = 10.58GPSRR194 pKa = 11.84LGKK197 pKa = 7.27TLWARR202 pKa = 11.84SLGPHH207 pKa = 6.96AYY209 pKa = 9.55IMGMVSGHH217 pKa = 5.28VLTRR221 pKa = 11.84DD222 pKa = 3.44MPDD225 pKa = 2.6AQYY228 pKa = 11.73AVFDD232 pKa = 4.43DD233 pKa = 3.82MRR235 pKa = 11.84GGISMFPSFKK245 pKa = 10.24EE246 pKa = 3.57WFGAQEE252 pKa = 4.17VVTVKK257 pKa = 9.72TLYY260 pKa = 10.24RR261 pKa = 11.84DD262 pKa = 3.61PVQMKK267 pKa = 8.97WGKK270 pKa = 8.84PCIWLANADD279 pKa = 3.96PRR281 pKa = 11.84DD282 pKa = 3.7QLKK285 pKa = 10.93ADD287 pKa = 3.28ITDD290 pKa = 3.66RR291 pKa = 11.84TPKK294 pKa = 10.53GRR296 pKa = 11.84IDD298 pKa = 5.41LIYY301 pKa = 10.94NDD303 pKa = 4.47IEE305 pKa = 4.1WMEE308 pKa = 4.19ANCIFVGLQEE318 pKa = 4.88AIFRR322 pKa = 11.84ASTEE326 pKa = 3.81

Molecular weight: 36.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTL5|A0A140CTL5_9VIRU Replication-associated protein OS=Pteropus associated gemycircularvirus 10 OX=1985404 PE=3 SV=1
MM1 pKa = 7.38TLHH4 pKa = 6.55SLAARR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84YY12 pKa = 9.59AKK14 pKa = 10.66LMASRR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84VPAGRR27 pKa = 11.84RR28 pKa = 11.84SRR30 pKa = 11.84PRR32 pKa = 11.84SRR34 pKa = 11.84YY35 pKa = 5.02TAKK38 pKa = 9.56TRR40 pKa = 11.84RR41 pKa = 11.84YY42 pKa = 8.55APKK45 pKa = 10.12RR46 pKa = 11.84PMSKK50 pKa = 10.14KK51 pKa = 10.3RR52 pKa = 11.84ILDD55 pKa = 3.21VTTVKK60 pKa = 10.51KK61 pKa = 10.16RR62 pKa = 11.84DD63 pKa = 3.51NMPCYY68 pKa = 10.68TNMTNSGAGTTFSITAAYY86 pKa = 8.85IRR88 pKa = 11.84PNTSSDD94 pKa = 3.39PLINHH99 pKa = 5.99PTVMLWNATARR110 pKa = 11.84DD111 pKa = 3.98LTNSAGTINIRR122 pKa = 11.84AVEE125 pKa = 4.16SARR128 pKa = 11.84TSSTPYY134 pKa = 9.78MVGLKK139 pKa = 8.84EE140 pKa = 4.09TVEE143 pKa = 4.28IQASSGMPWQWRR155 pKa = 11.84RR156 pKa = 11.84ICFTYY161 pKa = 10.34KK162 pKa = 10.72GILPGSTPTTTYY174 pKa = 9.73YY175 pKa = 10.25PYY177 pKa = 10.58RR178 pKa = 11.84EE179 pKa = 4.08TSSGFVRR186 pKa = 11.84VASPLSGDD194 pKa = 3.65RR195 pKa = 11.84NSGATYY201 pKa = 10.99DD202 pKa = 3.68LFYY205 pKa = 10.98LIFAGQNASDD215 pKa = 3.47WTDD218 pKa = 3.33PMVAKK223 pKa = 10.57LDD225 pKa = 3.52QTRR228 pKa = 11.84ISVKK232 pKa = 9.58YY233 pKa = 10.28DD234 pKa = 2.92KK235 pKa = 10.89TRR237 pKa = 11.84TLSCGNDD244 pKa = 3.26DD245 pKa = 4.37GSIRR249 pKa = 11.84KK250 pKa = 8.5YY251 pKa = 10.53KK252 pKa = 9.66HH253 pKa = 3.45WHH255 pKa = 5.77AMGKK259 pKa = 7.26TLAYY263 pKa = 10.47DD264 pKa = 3.78DD265 pKa = 5.27DD266 pKa = 4.91EE267 pKa = 6.14NGEE270 pKa = 4.14NMITNYY276 pKa = 10.25QSVDD280 pKa = 3.16SRR282 pKa = 11.84VGMGDD287 pKa = 3.72YY288 pKa = 10.87YY289 pKa = 11.55VVDD292 pKa = 4.2LFRR295 pKa = 11.84SRR297 pKa = 11.84FGATASDD304 pKa = 3.46SLLFNPAATLYY315 pKa = 9.05WHH317 pKa = 7.05EE318 pKa = 4.35KK319 pKa = 9.3

Molecular weight: 36.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

886

241

326

295.3

33.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.126 ± 0.139

1.354 ± 0.263

6.433 ± 0.423

5.192 ± 1.225

3.612 ± 0.453

8.804 ± 1.206

2.483 ± 0.396

4.176 ± 0.385

3.837 ± 0.557

7.675 ± 0.793

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.822 ± 0.464

3.047 ± 0.695

5.418 ± 0.196

1.919 ± 0.24

8.691 ± 0.57

7.111 ± 1.001

6.772 ± 1.46

5.643 ± 0.429

2.483 ± 0.284

4.402 ± 0.64
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski