Kaumoebavirus

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 427 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V0CNX9|A0A1V0CNX9_9VIRU Uncharacterized protein OS=Kaumoebavirus OX=1859492 GN=BNJ_00223 PE=4 SV=1
MM1 pKa = 7.53HH2 pKa = 7.81PLEE5 pKa = 4.17QIFRR9 pKa = 11.84NFLEE13 pKa = 4.31SLEE16 pKa = 4.35KK17 pKa = 10.4AWLEE21 pKa = 3.82LDD23 pKa = 3.87HH24 pKa = 7.46VDD26 pKa = 4.27TEE28 pKa = 4.48VEE30 pKa = 4.15YY31 pKa = 11.38AEE33 pKa = 5.14SNTSRR38 pKa = 11.84YY39 pKa = 8.96ARR41 pKa = 11.84VMYY44 pKa = 10.44RR45 pKa = 11.84FADD48 pKa = 3.6EE49 pKa = 5.32FIVEE53 pKa = 5.42GIFEE57 pKa = 4.68LCGQYY62 pKa = 9.14MEE64 pKa = 5.58ASLLSCHH71 pKa = 6.73GEE73 pKa = 3.99LFRR76 pKa = 11.84WQYY79 pKa = 11.25DD80 pKa = 3.13ISADD84 pKa = 3.4PLLIHH89 pKa = 6.48VAYY92 pKa = 10.1ADD94 pKa = 2.99IMEE97 pKa = 4.73YY98 pKa = 10.12IEE100 pKa = 5.47DD101 pKa = 3.75NYY103 pKa = 11.37NALFQEE109 pKa = 5.09DD110 pKa = 3.88EE111 pKa = 4.44DD112 pKa = 5.33ADD114 pKa = 4.08SEE116 pKa = 4.56LEE118 pKa = 4.1PEE120 pKa = 4.17QGIAPGPFTSVFEE133 pKa = 4.58NVAHH137 pKa = 6.49MLTVV141 pKa = 3.41

Molecular weight: 16.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V0CNC5|A0A1V0CNC5_9VIRU Uncharacterized protein OS=Kaumoebavirus OX=1859492 GN=BNJ_00009 PE=4 SV=1
MM1 pKa = 7.78RR2 pKa = 11.84YY3 pKa = 9.03VRR5 pKa = 11.84GMFKK9 pKa = 10.46YY10 pKa = 9.12VWCLAAPATRR20 pKa = 11.84PKK22 pKa = 10.35RR23 pKa = 11.84DD24 pKa = 3.13FFGGVRR30 pKa = 11.84GILRR34 pKa = 11.84RR35 pKa = 11.84NYY37 pKa = 9.71GCEE40 pKa = 3.93DD41 pKa = 3.52EE42 pKa = 5.92LRR44 pKa = 11.84EE45 pKa = 4.1QKK47 pKa = 10.19RR48 pKa = 11.84GKK50 pKa = 9.84ALKK53 pKa = 10.4NVV55 pKa = 3.39

Molecular weight: 6.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

427

0

427

93067

37

1589

218.0

25.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.106 ± 0.132

1.62 ± 0.074

5.879 ± 0.102

7.624 ± 0.155

4.501 ± 0.089

5.551 ± 0.136

1.963 ± 0.057

6.956 ± 0.107

7.996 ± 0.161

8.634 ± 0.116

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.613 ± 0.059

5.047 ± 0.096

3.847 ± 0.086

2.872 ± 0.076

5.247 ± 0.112

6.068 ± 0.122

5.228 ± 0.147

6.192 ± 0.092

1.318 ± 0.053

4.737 ± 0.086
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski