Bean white chlorosis mosaic virus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus

Average proteome isoelectric point is 7.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K7PRX3|K7PRX3_9GEMI Capsid protein OS=Bean white chlorosis mosaic virus OX=2169732 GN=AV1 PE=3 SV=1
MM1 pKa = 7.88PPPKK5 pKa = 10.09KK6 pKa = 10.36FRR8 pKa = 11.84VQSKK12 pKa = 10.58NYY14 pKa = 9.23FLTYY18 pKa = 8.52PQCSLTKK25 pKa = 10.54EE26 pKa = 4.03EE27 pKa = 5.15ALSQIQNLATPVNKK41 pKa = 10.09KK42 pKa = 9.95FIKK45 pKa = 9.53ICRR48 pKa = 11.84EE49 pKa = 3.69FHH51 pKa = 7.56EE52 pKa = 5.64DD53 pKa = 3.65GQPHH57 pKa = 6.5LHH59 pKa = 6.28VLIQFEE65 pKa = 4.74GKK67 pKa = 8.79YY68 pKa = 9.48QCTNNRR74 pKa = 11.84FFDD77 pKa = 4.02LVSPTRR83 pKa = 11.84SAHH86 pKa = 4.86FHH88 pKa = 6.55PNIQGAKK95 pKa = 9.25SSSDD99 pKa = 3.11VKK101 pKa = 11.24SYY103 pKa = 10.79IDD105 pKa = 3.57KK106 pKa = 11.33DD107 pKa = 3.38GDD109 pKa = 3.9TVEE112 pKa = 4.19WGQFQIDD119 pKa = 3.41GRR121 pKa = 11.84SARR124 pKa = 11.84GGQQSANDD132 pKa = 4.05TYY134 pKa = 11.82AKK136 pKa = 10.54ALNAGSAEE144 pKa = 4.01AALQIIKK151 pKa = 10.24EE152 pKa = 4.16EE153 pKa = 4.13QPQHH157 pKa = 6.73FFLQHH162 pKa = 6.07HH163 pKa = 6.14NLVANATRR171 pKa = 11.84IFQKK175 pKa = 10.35PPEE178 pKa = 4.41PWTPPFPLSSFTNVPDD194 pKa = 5.1EE195 pKa = 4.14MQEE198 pKa = 3.79WADD201 pKa = 3.9DD202 pKa = 4.08YY203 pKa = 11.34FGKK206 pKa = 10.54SPAARR211 pKa = 11.84PEE213 pKa = 4.13RR214 pKa = 11.84PLSLIVEE221 pKa = 4.81GDD223 pKa = 3.34SRR225 pKa = 11.84TGKK228 pKa = 8.52TMWARR233 pKa = 11.84SLGPHH238 pKa = 6.57NYY240 pKa = 10.17LSGHH244 pKa = 6.9LDD246 pKa = 3.48FNSRR250 pKa = 11.84VYY252 pKa = 10.97SDD254 pKa = 3.42EE255 pKa = 4.06VEE257 pKa = 4.31YY258 pKa = 11.39NVIDD262 pKa = 4.4DD263 pKa = 4.14VAPHH267 pKa = 5.29YY268 pKa = 10.97LKK270 pKa = 10.78LKK272 pKa = 9.03HH273 pKa = 5.83WKK275 pKa = 9.59EE276 pKa = 3.97LFWAQKK282 pKa = 9.62KK283 pKa = 6.37WQSNCKK289 pKa = 8.45YY290 pKa = 9.81GKK292 pKa = 9.42PVVIKK297 pKa = 10.53GGIPSIVLCNPGEE310 pKa = 4.16GASYY314 pKa = 11.27KK315 pKa = 10.87DD316 pKa = 3.52FLNKK320 pKa = 10.18EE321 pKa = 4.14EE322 pKa = 4.17NTGIRR327 pKa = 11.84NWTLKK332 pKa = 10.24NAVFITLDD340 pKa = 3.28SPLYY344 pKa = 10.16QEE346 pKa = 4.51EE347 pKa = 4.55TQGGQEE353 pKa = 4.26EE354 pKa = 4.96VSQTTPHH361 pKa = 6.32

Molecular weight: 41.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|L7P9S9|L7P9S9_9GEMI Nuclear shuttle protein OS=Bean white chlorosis mosaic virus OX=2169732 GN=BV1 PE=3 SV=1
MM1 pKa = 7.2YY2 pKa = 9.7PLRR5 pKa = 11.84NKK7 pKa = 10.43RR8 pKa = 11.84GFTYY12 pKa = 10.33NPRR15 pKa = 11.84RR16 pKa = 11.84FNPRR20 pKa = 11.84NTAFNRR26 pKa = 11.84STAGKK31 pKa = 9.13RR32 pKa = 11.84HH33 pKa = 5.94DD34 pKa = 3.61GKK36 pKa = 10.93RR37 pKa = 11.84RR38 pKa = 11.84GGNALKK44 pKa = 10.78PNDD47 pKa = 4.26EE48 pKa = 4.78PKK50 pKa = 8.3MTAQRR55 pKa = 11.84IHH57 pKa = 6.43EE58 pKa = 4.14NQYY61 pKa = 9.92GPEE64 pKa = 3.88FVMSHH69 pKa = 5.8NSAISTFISYY79 pKa = 9.76PSLGKK84 pKa = 8.7TEE86 pKa = 4.48PNRR89 pKa = 11.84SRR91 pKa = 11.84AYY93 pKa = 9.7IKK95 pKa = 10.53LKK97 pKa = 10.15RR98 pKa = 11.84LRR100 pKa = 11.84FKK102 pKa = 10.51GTVKK106 pKa = 10.13IEE108 pKa = 3.89RR109 pKa = 11.84AQSDD113 pKa = 3.78MNMDD117 pKa = 3.58GSIPKK122 pKa = 9.79VEE124 pKa = 4.44GVFSLVVVVDD134 pKa = 5.02RR135 pKa = 11.84KK136 pKa = 9.84PHH138 pKa = 6.36LGPTGCLHH146 pKa = 6.5TFDD149 pKa = 4.87EE150 pKa = 4.88LFGARR155 pKa = 11.84IHH157 pKa = 5.86SHH159 pKa = 6.13GNLSITPSLKK169 pKa = 9.27DD170 pKa = 2.88RR171 pKa = 11.84FYY173 pKa = 10.59IRR175 pKa = 11.84HH176 pKa = 4.4VFKK179 pKa = 10.81RR180 pKa = 11.84VLSVEE185 pKa = 4.19KK186 pKa = 9.53DD187 pKa = 3.15TLMVDD192 pKa = 3.64VEE194 pKa = 4.64GSTTLSNRR202 pKa = 11.84RR203 pKa = 11.84YY204 pKa = 10.04NLWSTFKK211 pKa = 11.17DD212 pKa = 3.7LDD214 pKa = 3.73HH215 pKa = 7.44DD216 pKa = 4.33SCKK219 pKa = 10.65GVYY222 pKa = 10.47DD223 pKa = 4.52NISKK227 pKa = 10.38NALLVYY233 pKa = 8.04YY234 pKa = 9.89CWMSDD239 pKa = 3.31TMSKK243 pKa = 11.05ASTFVSFDD251 pKa = 3.33LDD253 pKa = 4.08YY254 pKa = 11.31IGG256 pKa = 5.26

Molecular weight: 29.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1507

85

361

215.3

24.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.844 ± 0.546

1.659 ± 0.23

5.176 ± 0.312

5.043 ± 0.537

4.247 ± 0.531

5.707 ± 0.561

3.716 ± 0.251

5.574 ± 0.547

6.238 ± 0.649

6.901 ± 0.579

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.322 ± 0.569

5.441 ± 0.583

5.574 ± 0.596

4.313 ± 0.882

6.901 ± 0.915

8.825 ± 1.272

6.038 ± 0.66

5.839 ± 0.755

1.593 ± 0.242

4.048 ± 0.554
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski