Acinetobacter phage ZZ1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Twarogvirinae; Zedzedvirus; Acinetobacter virus ZZ1

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 256 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W0B451|W0B451_9CAUD Uncharacterized protein OS=Acinetobacter phage ZZ1 OX=1049283 GN=ZZ1p0140 PE=4 SV=1
MM1 pKa = 7.76EE2 pKa = 5.54NLIQPTEE9 pKa = 3.95EE10 pKa = 3.74QFEE13 pKa = 4.42QIRR16 pKa = 11.84DD17 pKa = 3.81EE18 pKa = 5.7LEE20 pKa = 4.19GCSDD24 pKa = 4.16DD25 pKa = 4.49FGRR28 pKa = 11.84THH30 pKa = 6.82KK31 pKa = 10.59RR32 pKa = 11.84VLTEE36 pKa = 4.72LGLDD40 pKa = 3.25TDD42 pKa = 4.54LRR44 pKa = 11.84DD45 pKa = 3.59SVIYY49 pKa = 10.8NDD51 pKa = 3.66TLEE54 pKa = 4.63TYY56 pKa = 9.95TFLCEE61 pKa = 6.07NCDD64 pKa = 3.79CWCSPDD70 pKa = 3.58TRR72 pKa = 11.84VHH74 pKa = 5.2NQIAEE79 pKa = 4.09MTVCEE84 pKa = 4.34EE85 pKa = 4.57CDD87 pKa = 3.44EE88 pKa = 4.19QLSS91 pKa = 3.76

Molecular weight: 10.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3WVL6|I3WVL6_9CAUD Uncharacterized protein OS=Acinetobacter phage ZZ1 OX=1049283 GN=ZZ1p0077 PE=4 SV=1
MM1 pKa = 7.68NNLQTQLIIAARR13 pKa = 11.84TNIKK17 pKa = 10.58SVMKK21 pKa = 9.63TMRR24 pKa = 11.84PGPSIATVCITDD36 pKa = 3.4RR37 pKa = 11.84ADD39 pKa = 3.34YY40 pKa = 11.29DD41 pKa = 3.66EE42 pKa = 5.49LNRR45 pKa = 11.84IQKK48 pKa = 9.92DD49 pKa = 3.04IKK51 pKa = 10.62RR52 pKa = 11.84LLNINTGRR60 pKa = 11.84KK61 pKa = 8.67KK62 pKa = 10.72

Molecular weight: 7.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

256

0

256

51763

34

1303

202.2

22.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.051 ± 0.23

1.097 ± 0.074

6.194 ± 0.129

6.497 ± 0.21

4.281 ± 0.111

5.832 ± 0.238

1.936 ± 0.101

7.384 ± 0.142

7.364 ± 0.191

8.048 ± 0.143

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.687 ± 0.091

5.877 ± 0.111

3.632 ± 0.083

3.531 ± 0.109

4.148 ± 0.119

6.163 ± 0.151

6.335 ± 0.28

6.487 ± 0.117

1.343 ± 0.066

4.113 ± 0.129
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski