Corynebacterium mustelae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Corynebacteriaceae; Corynebacterium

Average proteome isoelectric point is 5.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3046 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0G3GUR6|A0A0G3GUR6_9CORY Nicotinamide mononucleotide transporter PnuC OS=Corynebacterium mustelae OX=571915 GN=CMUST_02775 PE=3 SV=1
MM1 pKa = 7.1TFDD4 pKa = 3.09WQMPRR9 pKa = 11.84DD10 pKa = 4.2PFADD14 pKa = 4.14DD15 pKa = 4.49PNDD18 pKa = 3.64PASFLEE24 pKa = 4.29ADD26 pKa = 4.1EE27 pKa = 4.76PLPPLSDD34 pKa = 3.82DD35 pKa = 3.52EE36 pKa = 4.39RR37 pKa = 11.84AQIQQDD43 pKa = 3.99LQLVAQFKK51 pKa = 10.47NALQPRR57 pKa = 11.84GINGIFFFCEE67 pKa = 3.79DD68 pKa = 3.94CEE70 pKa = 4.23QQHH73 pKa = 6.32FYY75 pKa = 11.26DD76 pKa = 3.67WDD78 pKa = 3.54ILASNMLATLAGEE91 pKa = 4.35LSPVHH96 pKa = 6.17EE97 pKa = 4.66PSVNPNPQAYY107 pKa = 9.46VPWDD111 pKa = 3.43YY112 pKa = 11.65CLGYY116 pKa = 10.55LDD118 pKa = 5.09GLEE121 pKa = 4.15APRR124 pKa = 5.31

Molecular weight: 14.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0G3H403|A0A0G3H403_9CORY Acetylglutamate kinase OS=Corynebacterium mustelae OX=571915 GN=argB PE=3 SV=1
MM1 pKa = 7.46TKK3 pKa = 10.27GKK5 pKa = 8.73RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84AKK17 pKa = 10.01KK18 pKa = 8.51HH19 pKa = 4.28GFRR22 pKa = 11.84IRR24 pKa = 11.84MRR26 pKa = 11.84TRR28 pKa = 11.84AGRR31 pKa = 11.84AIVAARR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 9.72GRR42 pKa = 11.84AKK44 pKa = 9.63LTAA47 pKa = 4.21

Molecular weight: 5.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3046

0

3046

1001453

28

3035

328.8

35.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.967 ± 0.056

0.932 ± 0.015

5.808 ± 0.036

6.042 ± 0.047

3.677 ± 0.027

7.608 ± 0.051

2.317 ± 0.021

5.744 ± 0.034

3.604 ± 0.035

9.458 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.11 ± 0.02

3.172 ± 0.028

5.108 ± 0.036

3.46 ± 0.025

5.668 ± 0.034

6.087 ± 0.033

6.422 ± 0.039

7.992 ± 0.041

1.474 ± 0.019

2.349 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski