Acinetobacter phage YMC13/03/R2096

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 162 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A0RMY3|A0A0A0RMY3_9CAUD Uncharacterized protein OS=Acinetobacter phage YMC13/03/R2096 OX=1560342 GN=BPABA577_01510 PE=4 SV=1
MM1 pKa = 7.03NTFEE5 pKa = 4.52YY6 pKa = 10.11IKK8 pKa = 10.66SAVASEE14 pKa = 5.02IYY16 pKa = 9.86QLPSISFDD24 pKa = 3.26YY25 pKa = 11.07HH26 pKa = 6.75QDD28 pKa = 3.46NEE30 pKa = 4.4QALLDD35 pKa = 4.51HH36 pKa = 6.93IEE38 pKa = 4.23VNGYY42 pKa = 7.69CQPSEE47 pKa = 3.82IGTTAEE53 pKa = 4.37AYY55 pKa = 10.55NIVWSDD61 pKa = 3.12LARR64 pKa = 11.84NTDD67 pKa = 3.24YY68 pKa = 11.6EE69 pKa = 4.26MPDD72 pKa = 3.43FSLCKK77 pKa = 10.23SSLEE81 pKa = 4.29CIEE84 pKa = 4.52VEE86 pKa = 4.26GQAILSGAYY95 pKa = 9.89YY96 pKa = 10.26EE97 pKa = 4.23ATQEE101 pKa = 3.99IVKK104 pKa = 9.87EE105 pKa = 3.82IASAIDD111 pKa = 3.07EE112 pKa = 4.42CFSYY116 pKa = 11.26DD117 pKa = 3.88FGNLEE122 pKa = 4.17LTEE125 pKa = 4.34MYY127 pKa = 10.38LGEE130 pKa = 4.86SGLGHH135 pKa = 6.87IPHH138 pKa = 7.6DD139 pKa = 4.21YY140 pKa = 10.8EE141 pKa = 5.53IDD143 pKa = 3.56IADD146 pKa = 3.46SSMLVWVKK154 pKa = 11.03SKK156 pKa = 10.09MIQITVSDD164 pKa = 3.72VTLYY168 pKa = 11.21GILEE172 pKa = 4.13QVEE175 pKa = 4.22NN176 pKa = 4.15

Molecular weight: 19.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A0RMI8|A0A0A0RMI8_9CAUD Phosphoprotein phosphatase OS=Acinetobacter phage YMC13/03/R2096 OX=1560342 GN=BPABA577_00010 PE=4 SV=1
MM1 pKa = 7.69PKK3 pKa = 9.9INQKK7 pKa = 10.12GFALRR12 pKa = 11.84GFMCGVLALPINTPCHH28 pKa = 4.99VWLFPHH34 pKa = 7.62RR35 pKa = 11.84IAQVV39 pKa = 2.86

Molecular weight: 4.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

162

0

162

27861

38

923

172.0

19.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.682 ± 0.216

1.206 ± 0.094

6.335 ± 0.159

7.161 ± 0.254

4.278 ± 0.15

6.909 ± 0.162

1.892 ± 0.111

6.457 ± 0.163

7.667 ± 0.246

8.255 ± 0.191

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.724 ± 0.087

4.914 ± 0.224

3.058 ± 0.108

3.679 ± 0.113

4.343 ± 0.136

6.525 ± 0.232

5.714 ± 0.236

7.462 ± 0.151

1.403 ± 0.08

4.336 ± 0.133
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski