Arthrobacter phage Molivia

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Amigovirus; Arthrobacteria virus Molivia

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 88 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A286S2C6|A0A286S2C6_9CAUD DnaQ-like exonuclease OS=Arthrobacter phage Molivia OX=2015839 GN=50 PE=4 SV=1
MM1 pKa = 7.41TEE3 pKa = 4.14SNVEE7 pKa = 3.83PVEE10 pKa = 4.19TEE12 pKa = 4.04EE13 pKa = 4.33EE14 pKa = 4.46VVEE17 pKa = 4.3PEE19 pKa = 4.42LKK21 pKa = 10.52EE22 pKa = 3.62VDD24 pKa = 4.05NIVSQIRR31 pKa = 11.84YY32 pKa = 9.54APDD35 pKa = 3.87PCSTCGG41 pKa = 3.28

Molecular weight: 4.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A286N4C6|A0A286N4C6_9CAUD Uncharacterized protein OS=Arthrobacter phage Molivia OX=2015839 GN=2 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.61NSGPRR7 pKa = 11.84VKK9 pKa = 10.24IEE11 pKa = 3.71IAHH14 pKa = 4.99KK15 pKa = 9.41QGRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LTTFLRR26 pKa = 11.84ADD28 pKa = 3.76NATTWDD34 pKa = 4.5DD35 pKa = 3.29IQRR38 pKa = 11.84AAEE41 pKa = 3.91WQANLVGVPGGFQQHH56 pKa = 5.33SRR58 pKa = 11.84EE59 pKa = 4.01IRR61 pKa = 11.84PVLAHH66 pKa = 6.32KK67 pKa = 10.33LYY69 pKa = 10.95YY70 pKa = 10.26RR71 pKa = 11.84GATQTITEE79 pKa = 4.29MPP81 pKa = 3.84

Molecular weight: 9.29 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

88

0

88

17012

33

1580

193.3

21.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.893 ± 0.592

0.841 ± 0.145

6.207 ± 0.188

7.16 ± 0.395

3.327 ± 0.129

7.312 ± 0.329

1.899 ± 0.177

4.996 ± 0.132

5.49 ± 0.282

7.936 ± 0.254

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.51 ± 0.141

4.409 ± 0.183

4.191 ± 0.245

3.809 ± 0.229

5.373 ± 0.215

5.655 ± 0.235

6.642 ± 0.322

7.395 ± 0.258

1.799 ± 0.165

3.157 ± 0.21
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski