Lacibacter luteus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Lacibacter

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4180 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Q1CNH8|A0A4Q1CNH8_9BACT Beta-glucosidase OS=Lacibacter luteus OX=2508719 GN=ESA94_04415 PE=4 SV=1
MM1 pKa = 7.29KK2 pKa = 10.46QFLPYY7 pKa = 9.97KK8 pKa = 8.45RR9 pKa = 11.84NCMGAAIKK17 pKa = 10.24NLHH20 pKa = 6.56LLFTLSIALFVSTNVANAQCTCTGNIVVNPSFEE53 pKa = 4.39SGTTGWSWSGGSFNAGTGAIACGSKK78 pKa = 10.49SGDD81 pKa = 3.42FQISNTSSNWVSQTIGTDD99 pKa = 3.72LAPGTKK105 pKa = 9.47INASVYY111 pKa = 10.77AGTHH115 pKa = 5.07NNSYY119 pKa = 8.75YY120 pKa = 10.35HH121 pKa = 5.9QVAIDD126 pKa = 3.92FFDD129 pKa = 5.82ANWNWISNSKK139 pKa = 10.38VEE141 pKa = 4.21VNKK144 pKa = 10.1VLSTSPVGPQLYY156 pKa = 8.27TWSGTVPVGTKK167 pKa = 7.39YY168 pKa = 9.61TNVSFSGNGDD178 pKa = 3.84WIKK181 pKa = 10.2TDD183 pKa = 3.21QWCVTLTPPAGGSIGDD199 pKa = 4.23RR200 pKa = 11.84VWLDD204 pKa = 3.06ADD206 pKa = 4.07GDD208 pKa = 4.27GLQDD212 pKa = 3.4ASEE215 pKa = 4.26TSGIAGVTVQLKK227 pKa = 10.25NSLGSVIATTTTNASGNYY245 pKa = 9.76LFTGLAAGNYY255 pKa = 6.93TVVFPTSISGAVVTPQNVGLDD276 pKa = 3.97DD277 pKa = 4.96NVDD280 pKa = 3.47SDD282 pKa = 4.49ASQTTGATSTITLATNQNITNVDD305 pKa = 3.06AGYY308 pKa = 10.83CPTTLSLGNRR318 pKa = 11.84VWYY321 pKa = 7.73DD322 pKa = 3.48TNNDD326 pKa = 4.14GINSNEE332 pKa = 3.8NGIPNLTVYY341 pKa = 10.55LYY343 pKa = 11.09KK344 pKa = 10.48DD345 pKa = 3.74DD346 pKa = 5.55NNDD349 pKa = 3.19NVADD353 pKa = 3.93AAAIATAVTDD363 pKa = 3.82ANGYY367 pKa = 10.47YY368 pKa = 9.01MFSNLAPGNYY378 pKa = 8.66IVGAVTPAGYY388 pKa = 9.23MSSLVNGGDD397 pKa = 3.46PDD399 pKa = 5.01DD400 pKa = 5.17NNNSDD405 pKa = 4.55DD406 pKa = 3.97NGEE409 pKa = 4.24VTVGAEE415 pKa = 4.05TRR417 pKa = 11.84GLAITLVAGTEE428 pKa = 3.99PLVDD432 pKa = 3.89GNTNSNSNITYY443 pKa = 10.52DD444 pKa = 4.2FGFLPDD450 pKa = 4.37CNCTSSSSNLLINGSFEE467 pKa = 4.18NGTTGWSASGGSVSSGTGYY486 pKa = 9.57VACGAANGFNSWSSGTSRR504 pKa = 11.84VWQDD508 pKa = 2.87VAVAAGSTVVFKK520 pKa = 11.02GFAGVHH526 pKa = 4.68TAGLTCSPKK535 pKa = 10.61LSLIFYY541 pKa = 9.14NSSNTVISQNDD552 pKa = 3.44VVVTRR557 pKa = 11.84DD558 pKa = 2.69VDD560 pKa = 3.52KK561 pKa = 11.62YY562 pKa = 10.68FGQLEE567 pKa = 4.44QYY569 pKa = 10.42SITAVAPAGTVKK581 pKa = 10.25VRR583 pKa = 11.84VQSAITCNYY592 pKa = 7.32MKK594 pKa = 10.7LDD596 pKa = 4.12ALCLTATAPLALGDD610 pKa = 4.32RR611 pKa = 11.84VFFDD615 pKa = 4.9LNDD618 pKa = 3.21NGTRR622 pKa = 11.84DD623 pKa = 3.55GSEE626 pKa = 3.68TGLAGVTVKK635 pKa = 10.48LYY637 pKa = 11.12ADD639 pKa = 3.83NNNDD643 pKa = 3.62NIADD647 pKa = 4.08GAALQTTTTDD657 pKa = 2.77ANGFYY662 pKa = 10.5RR663 pKa = 11.84FSNLTAGNYY672 pKa = 8.73IVGVVVPAGYY682 pKa = 10.07RR683 pKa = 11.84SSTLTGVDD691 pKa = 3.23PDD693 pKa = 4.25NNVDD697 pKa = 5.66LDD699 pKa = 4.37DD700 pKa = 4.81NGNNTLISGEE710 pKa = 3.88IRR712 pKa = 11.84GNAVTLSAGSEE723 pKa = 4.01PQEE726 pKa = 3.91SGNFNNTYY734 pKa = 11.03DD735 pKa = 3.87FGFTGTGSIGDD746 pKa = 3.96FVWNDD751 pKa = 2.98LNANGIQDD759 pKa = 3.58AGEE762 pKa = 4.59PGLSGVTVTLTYY774 pKa = 10.48PGGTTVTATTDD785 pKa = 3.12ANGAYY790 pKa = 9.54QFNNLPPGTYY800 pKa = 9.71SISFSTPSGYY810 pKa = 9.81IAGSANQGADD820 pKa = 3.58DD821 pKa = 5.22AKK823 pKa = 11.26DD824 pKa = 3.49SDD826 pKa = 4.47PVSGTVSGIVLTAGQNNTTIDD847 pKa = 3.26AGFVNNQLVLGNFVWYY863 pKa = 9.94DD864 pKa = 3.22KK865 pKa = 11.56DD866 pKa = 3.59NDD868 pKa = 3.97GVQDD872 pKa = 3.57AGEE875 pKa = 4.13PGIAGVTVNLYY886 pKa = 10.68KK887 pKa = 10.72DD888 pKa = 3.69ANGDD892 pKa = 3.93NIADD896 pKa = 4.06GAAVATTTTNASGLYY911 pKa = 10.22SFTGLTAGNYY921 pKa = 8.63IVGVVLPSGYY931 pKa = 10.16AASAVSSATPNNDD944 pKa = 2.47VNTDD948 pKa = 3.41NNGVTTASGEE958 pKa = 4.09VRR960 pKa = 11.84SNYY963 pKa = 8.16ITLSTAGEE971 pKa = 4.23PTTDD975 pKa = 3.79GDD977 pKa = 4.29DD978 pKa = 3.74ANGNLTLDD986 pKa = 3.78FGLRR990 pKa = 11.84GTASIGDD997 pKa = 4.17YY998 pKa = 10.36VWNDD1002 pKa = 3.21LNGNGIQNTGEE1013 pKa = 4.26PGLSGVTVTLTYY1025 pKa = 10.5PDD1027 pKa = 3.87GTTVTTTTDD1036 pKa = 2.77GSGAYY1041 pKa = 10.08LFANLAPGTYY1051 pKa = 9.48SVAFATPNGSIASPSNAGADD1071 pKa = 3.79DD1072 pKa = 4.22TKK1074 pKa = 11.47DD1075 pKa = 3.34SDD1077 pKa = 4.05PVSGVVSGITLTAGQTNTTIDD1098 pKa = 4.02AGFQSNGLNLGNFVWYY1114 pKa = 9.76DD1115 pKa = 3.42RR1116 pKa = 11.84NNNGVQDD1123 pKa = 3.74AGEE1126 pKa = 4.19PGIAGATVKK1135 pKa = 10.58LYY1137 pKa = 11.18ADD1139 pKa = 4.12ANLDD1143 pKa = 4.04NIADD1147 pKa = 4.14GAALQTTTTDD1157 pKa = 2.98ANGIYY1162 pKa = 9.92SFTGLTPGNYY1172 pKa = 8.72IAGVVLPAGYY1182 pKa = 9.66AASSVSSSTPNNDD1195 pKa = 2.62VNTDD1199 pKa = 3.45NNGVTTTSGEE1209 pKa = 3.97VRR1211 pKa = 11.84SNYY1214 pKa = 8.04ITLITASEE1222 pKa = 4.28PTTDD1226 pKa = 3.77GDD1228 pKa = 4.01GSNGNLTLDD1237 pKa = 4.29FGLKK1241 pKa = 8.67GTGSIGDD1248 pKa = 3.92FVWNDD1253 pKa = 3.34LNGDD1257 pKa = 4.58GIQNAGEE1264 pKa = 4.45PGLSAVTVTLTYY1276 pKa = 10.34PGGATATTTTDD1287 pKa = 2.93ANGAYY1292 pKa = 9.87QFTNLAPGTYY1302 pKa = 8.98SVSFTTPSGYY1312 pKa = 9.66IAAPANQGADD1322 pKa = 3.71DD1323 pKa = 5.19AKK1325 pKa = 11.26DD1326 pKa = 3.49SDD1328 pKa = 4.41PVSGTVAGIVLTAGQTNTTIDD1349 pKa = 3.17AGFVSNQLTLGNFVWYY1365 pKa = 9.89DD1366 pKa = 3.22KK1367 pKa = 11.56DD1368 pKa = 3.59NDD1370 pKa = 3.97GVQDD1374 pKa = 3.68AGEE1377 pKa = 4.19LGIAAVTVNLYY1388 pKa = 10.7KK1389 pKa = 10.68DD1390 pKa = 3.68ANGDD1394 pKa = 3.6NVADD1398 pKa = 4.4GAAVATTTTNASGIYY1413 pKa = 9.3NFSGLTPGNYY1423 pKa = 8.78IAGVVLPAGYY1433 pKa = 10.31APSSVSSTTPNNDD1446 pKa = 2.35INTDD1450 pKa = 3.51NNGVTTAAGEE1460 pKa = 4.18VRR1462 pKa = 11.84SNYY1465 pKa = 8.26ITLTTAGEE1473 pKa = 4.16PTTDD1477 pKa = 3.29GDD1479 pKa = 4.07GSNGNLTLDD1488 pKa = 3.73FGLRR1492 pKa = 11.84GTASIGDD1499 pKa = 4.01FVWNDD1504 pKa = 3.34LNGDD1508 pKa = 4.65GIQTAGEE1515 pKa = 3.91PGIAGVTVTLTTAGGTVLEE1534 pKa = 4.64TTTTNASGFYY1544 pKa = 9.96QFSNLLPGTYY1554 pKa = 9.71NVVFATPTGFVASAANAGADD1574 pKa = 3.82DD1575 pKa = 4.62TKK1577 pKa = 11.47DD1578 pKa = 3.34SDD1580 pKa = 4.25PVSGTVTGVVLNADD1594 pKa = 3.93EE1595 pKa = 4.79NDD1597 pKa = 3.53NTVDD1601 pKa = 5.54AGFQSNQLKK1610 pKa = 9.54VGNYY1614 pKa = 6.99VWYY1617 pKa = 9.93DD1618 pKa = 3.23KK1619 pKa = 11.42NNNGFQDD1626 pKa = 3.51ADD1628 pKa = 3.53EE1629 pKa = 4.4TGIAGVSVKK1638 pKa = 10.74LYY1640 pKa = 11.09VDD1642 pKa = 4.11ADD1644 pKa = 3.84ANNIPDD1650 pKa = 3.77AAAIASTTTDD1660 pKa = 2.99ANGLYY1665 pKa = 9.9SFSGLTPGNYY1675 pKa = 8.92IVGITAPSGYY1685 pKa = 11.24AMAFTTLSSLLPNNDD1700 pKa = 3.19NNTDD1704 pKa = 3.56NNGITIIGTEE1714 pKa = 3.68ITSNYY1719 pKa = 7.36ITLITNSEE1727 pKa = 4.26PVTDD1731 pKa = 3.88GDD1733 pKa = 4.39GNNGNLTLDD1742 pKa = 4.21FGLKK1746 pKa = 8.67GTGSIGDD1753 pKa = 4.43LVWDD1757 pKa = 4.67DD1758 pKa = 4.79LNANGKK1764 pKa = 9.13QDD1766 pKa = 3.36AGEE1769 pKa = 4.09PGIAGVTVTLTYY1781 pKa = 10.33PGGSTTSVITDD1792 pKa = 3.18ATGTYY1797 pKa = 10.08LFSNLAPGSYY1807 pKa = 9.83SVSFDD1812 pKa = 3.26KK1813 pKa = 11.0PLGYY1817 pKa = 9.69IEE1819 pKa = 4.08TTANQVADD1827 pKa = 3.93DD1828 pKa = 4.4TKK1830 pKa = 11.37DD1831 pKa = 3.23SDD1833 pKa = 4.41VISGSVSNVTLTAGQTNFTVDD1854 pKa = 2.67AGYY1857 pKa = 10.76YY1858 pKa = 9.26KK1859 pKa = 10.22PASIGDD1865 pKa = 3.92FVWNDD1870 pKa = 2.98LNANGIQDD1878 pKa = 3.55AGEE1881 pKa = 4.11PGIAGATVNLTGTDD1895 pKa = 3.27ATGAAVNLTVSTEE1908 pKa = 3.88ADD1910 pKa = 3.16GSYY1913 pKa = 10.65SFSSLLPGTYY1923 pKa = 9.32NVSFVTPAGYY1933 pKa = 7.82VTATSNAGADD1943 pKa = 3.81DD1944 pKa = 4.36TKK1946 pKa = 11.47DD1947 pKa = 3.33SDD1949 pKa = 4.24PVSGAVNGITLISGQNNATVDD1970 pKa = 3.24AGFIQQTPIVLSGHH1984 pKa = 5.79VFYY1987 pKa = 10.79DD1988 pKa = 3.77DD1989 pKa = 4.81NGMSDD1994 pKa = 3.55GFVNGTSVIPSGINAVLYY2012 pKa = 10.59DD2013 pKa = 4.2PLTNTVVAVQPVPGYY2028 pKa = 8.42GQPGAGTFSFNVLTYY2043 pKa = 8.32STYY2046 pKa = 10.69RR2047 pKa = 11.84VLITTANPAVGSQAPVTSVLPASFRR2072 pKa = 11.84STGEE2076 pKa = 4.14TIGTAAGNDD2085 pKa = 3.62GTIDD2089 pKa = 3.72GKK2091 pKa = 11.12SSIINTTNQNIIEE2104 pKa = 4.26VNFAIKK2110 pKa = 10.02RR2111 pKa = 11.84VVLIVVDD2118 pKa = 4.03

Molecular weight: 216.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1M7T8|A0A4V1M7T8_9BACT Alpha-E domain-containing protein OS=Lacibacter luteus OX=2508719 GN=ESA94_00335 PE=4 SV=1
MM1 pKa = 7.99RR2 pKa = 11.84SYY4 pKa = 10.71FKK6 pKa = 10.46QWTGMRR12 pKa = 11.84LLRR15 pKa = 11.84LLMGVVAIVQGIASPTPLLWVIGAVLLVQAFLNIGCMDD53 pKa = 4.36SSCNIPVQQQKK64 pKa = 7.25MHH66 pKa = 6.54RR67 pKa = 3.77

Molecular weight: 7.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4180

0

4180

1521579

15

3128

364.0

40.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.746 ± 0.034

0.854 ± 0.013

5.036 ± 0.026

5.643 ± 0.038

5.035 ± 0.027

6.787 ± 0.037

1.829 ± 0.017

6.668 ± 0.029

7.036 ± 0.039

9.131 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.323 ± 0.021

5.76 ± 0.04

3.726 ± 0.021

3.963 ± 0.023

3.863 ± 0.023

6.241 ± 0.032

6.185 ± 0.048

6.697 ± 0.025

1.375 ± 0.014

4.102 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski