Flavisolibacter ginsenosidimutans

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavisolibacter

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4236 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5B8UEH1|A0A5B8UEH1_9BACT Endolytic murein transglycosylase OS=Flavisolibacter ginsenosidimutans OX=661481 GN=mltG PE=3 SV=1
MM1 pKa = 7.27YY2 pKa = 10.1SYY4 pKa = 11.71GLLEE8 pKa = 4.53PGCYY12 pKa = 10.03YY13 pKa = 10.87LVQEE17 pKa = 4.42EE18 pKa = 4.25TDD20 pKa = 4.12SIVEE24 pKa = 4.42LIKK27 pKa = 10.41VTVEE31 pKa = 4.01TDD33 pKa = 2.23HH34 pKa = 7.18CMYY37 pKa = 10.08VFKK40 pKa = 11.32YY41 pKa = 10.34GDD43 pKa = 3.5EE44 pKa = 4.73LVTEE48 pKa = 4.83WRR50 pKa = 11.84RR51 pKa = 11.84KK52 pKa = 7.24TDD54 pKa = 3.95AIFDD58 pKa = 4.27IIEE61 pKa = 4.35CLDD64 pKa = 3.74DD65 pKa = 4.51KK66 pKa = 11.31KK67 pKa = 11.05IEE69 pKa = 4.04AWEE72 pKa = 3.79KK73 pKa = 9.95QYY75 pKa = 11.86NNNEE79 pKa = 3.48EE80 pKa = 4.17SYY82 pKa = 10.65YY83 pKa = 10.91EE84 pKa = 4.08EE85 pKa = 5.74DD86 pKa = 3.6EE87 pKa = 4.37EE88 pKa = 4.83

Molecular weight: 10.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5B8ULW4|A0A5B8ULW4_9BACT DUF1211 domain-containing protein OS=Flavisolibacter ginsenosidimutans OX=661481 GN=FSB75_16565 PE=3 SV=1
MM1 pKa = 7.38KK2 pKa = 9.56RR3 pKa = 11.84TFQPHH8 pKa = 4.58RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 6.91TVHH16 pKa = 6.14GFRR19 pKa = 11.84KK20 pKa = 10.08RR21 pKa = 11.84MQSANGRR28 pKa = 11.84KK29 pKa = 8.94VLASRR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.16GRR39 pKa = 11.84HH40 pKa = 5.59KK41 pKa = 10.43LTVSDD46 pKa = 3.83EE47 pKa = 4.56RR48 pKa = 11.84KK49 pKa = 10.22LKK51 pKa = 10.73

Molecular weight: 6.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4236

0

4236

1490540

32

2602

351.9

39.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.042 ± 0.036

0.905 ± 0.015

5.131 ± 0.025

5.704 ± 0.045

5.004 ± 0.027

7.013 ± 0.033

1.906 ± 0.018

6.033 ± 0.028

6.913 ± 0.035

9.442 ± 0.044

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.135 ± 0.018

5.359 ± 0.041

3.978 ± 0.024

3.858 ± 0.021

4.232 ± 0.026

6.325 ± 0.031

5.959 ± 0.047

6.814 ± 0.029

1.312 ± 0.015

3.937 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski