Drancourtella sp. An57

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Drancourtella; unclassified Drancourtella

Average proteome isoelectric point is 6.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3069 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y3WA39|A0A1Y3WA39_9FIRM 50S ribosomal protein L2 OS=Drancourtella sp. An57 OX=1965647 GN=rplB PE=3 SV=1
MM1 pKa = 7.18KK2 pKa = 10.33RR3 pKa = 11.84KK4 pKa = 9.33LAVVCIMMLSATTILSGCGGSSDD27 pKa = 4.61DD28 pKa = 4.12SSSGGKK34 pKa = 7.9TKK36 pKa = 10.25IRR38 pKa = 11.84FATWDD43 pKa = 3.34VAEE46 pKa = 5.53DD47 pKa = 3.33VDD49 pKa = 4.44KK50 pKa = 11.31QQEE53 pKa = 4.19LVDD56 pKa = 4.19KK57 pKa = 10.82FNEE60 pKa = 3.91EE61 pKa = 3.76HH62 pKa = 7.68DD63 pKa = 4.91DD64 pKa = 3.99IEE66 pKa = 4.66VTLEE70 pKa = 4.04AYY72 pKa = 10.28GSDD75 pKa = 3.71FDD77 pKa = 4.38TKK79 pKa = 10.34ISAGMGSGDD88 pKa = 4.1TPDD91 pKa = 4.25VMYY94 pKa = 9.35MWNYY98 pKa = 7.71PAYY101 pKa = 10.07YY102 pKa = 10.18DD103 pKa = 4.15GLEE106 pKa = 4.33PLDD109 pKa = 5.09DD110 pKa = 4.73YY111 pKa = 11.25IAEE114 pKa = 4.57EE115 pKa = 4.14GDD117 pKa = 3.64EE118 pKa = 4.32YY119 pKa = 11.44KK120 pKa = 11.26SNFYY124 pKa = 8.72NTLWDD129 pKa = 3.96YY130 pKa = 12.15NMMDD134 pKa = 3.36GSTYY138 pKa = 10.28GIPVGFTTHH147 pKa = 6.58CLFYY151 pKa = 11.12NKK153 pKa = 10.23DD154 pKa = 3.3IFDD157 pKa = 4.11EE158 pKa = 4.85AGVEE162 pKa = 4.18YY163 pKa = 8.47PTADD167 pKa = 3.53WTWDD171 pKa = 3.66DD172 pKa = 3.95LQAAAKK178 pKa = 8.7TISEE182 pKa = 4.22KK183 pKa = 10.28TDD185 pKa = 2.87AKK187 pKa = 10.95GFSFQMKK194 pKa = 8.93PDD196 pKa = 4.18PYY198 pKa = 10.78DD199 pKa = 3.45FEE201 pKa = 4.59MYY203 pKa = 10.03LWSNGTSYY211 pKa = 11.19CDD213 pKa = 3.59EE214 pKa = 4.41NGEE217 pKa = 3.78MDD219 pKa = 4.36GYY221 pKa = 10.6INSEE225 pKa = 3.79EE226 pKa = 4.17SQEE229 pKa = 4.0VFQMFQDD236 pKa = 3.93MEE238 pKa = 4.4EE239 pKa = 4.1EE240 pKa = 5.31GYY242 pKa = 8.77ATATEE247 pKa = 4.33GDD249 pKa = 3.66GTDD252 pKa = 3.34EE253 pKa = 4.09FRR255 pKa = 11.84AGSTAMYY262 pKa = 10.37VYY264 pKa = 10.57GSWSINTLNEE274 pKa = 4.14DD275 pKa = 3.49GVNYY279 pKa = 10.41GVTTIPAFADD289 pKa = 3.34AGQDD293 pKa = 3.47SVSILSSSGLSMSKK307 pKa = 10.57DD308 pKa = 3.69SEE310 pKa = 4.45HH311 pKa = 7.4KK312 pKa = 9.93DD313 pKa = 3.39AAWEE317 pKa = 4.51FIKK320 pKa = 11.0YY321 pKa = 6.25WTNEE325 pKa = 3.74EE326 pKa = 4.18CNKK329 pKa = 10.15ARR331 pKa = 11.84IGTEE335 pKa = 3.9LPVLNTVVEE344 pKa = 4.5SEE346 pKa = 4.59GIMEE350 pKa = 4.18QEE352 pKa = 4.43EE353 pKa = 4.43YY354 pKa = 11.38APFYY358 pKa = 11.15TMLEE362 pKa = 4.15QSSGHH367 pKa = 5.65TPASFLMEE375 pKa = 4.12SWSEE379 pKa = 3.9VSEE382 pKa = 4.01NLSLSFEE389 pKa = 4.47QIFNPSSMQDD399 pKa = 3.02VSEE402 pKa = 4.4VLDD405 pKa = 3.87SAVKK409 pKa = 10.31

Molecular weight: 45.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y3W3X1|A0A1Y3W3X1_9FIRM Alanine--tRNA ligase OS=Drancourtella sp. An57 OX=1965647 GN=B5G11_14770 PE=3 SV=1
MM1 pKa = 7.67KK2 pKa = 8.72MTFQPKK8 pKa = 8.86KK9 pKa = 8.2RR10 pKa = 11.84SRR12 pKa = 11.84AKK14 pKa = 9.27VHH16 pKa = 5.81GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTAGGRR28 pKa = 11.84KK29 pKa = 8.71VLAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.92GRR39 pKa = 11.84KK40 pKa = 8.91RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 4.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3069

0

3069

969582

37

1974

315.9

35.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.263 ± 0.047

1.47 ± 0.017

5.503 ± 0.034

8.458 ± 0.061

4.064 ± 0.031

7.221 ± 0.043

1.811 ± 0.02

7.142 ± 0.046

6.765 ± 0.04

8.928 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.141 ± 0.023

3.842 ± 0.031

3.371 ± 0.026

3.376 ± 0.023

4.934 ± 0.038

5.538 ± 0.039

5.316 ± 0.034

6.77 ± 0.037

0.966 ± 0.015

4.119 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski