Chili leaf curl betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 4.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q7T476|Q7T476_9VIRU C1 protein OS=Chili leaf curl betasatellite OX=2010286 GN=C1 PE=4 SV=1
MM1 pKa = 6.76HH2 pKa = 7.23HH3 pKa = 7.02VYY5 pKa = 9.97EE6 pKa = 4.63LCPYY10 pKa = 8.2IQIYY14 pKa = 8.7GHH16 pKa = 5.39YY17 pKa = 10.14LRR19 pKa = 11.84RR20 pKa = 11.84QDD22 pKa = 3.06SCIVHH27 pKa = 7.65IYY29 pKa = 8.71MQMTIKK35 pKa = 10.68YY36 pKa = 8.48NNEE39 pKa = 3.25KK40 pKa = 10.51GMEE43 pKa = 3.71FRR45 pKa = 11.84IDD47 pKa = 3.45VKK49 pKa = 10.89INEE52 pKa = 4.55DD53 pKa = 3.28NSILVLVEE61 pKa = 4.17LCSTRR66 pKa = 11.84SPALAKK72 pKa = 9.01KK73 pKa = 8.95TFMIPYY79 pKa = 8.61GHH81 pKa = 7.44DD82 pKa = 3.85GIIPPFDD89 pKa = 4.09FNILEE94 pKa = 4.18EE95 pKa = 4.99GIHH98 pKa = 6.55NILKK102 pKa = 10.38VMYY105 pKa = 8.74KK106 pKa = 10.17DD107 pKa = 3.43SRR109 pKa = 11.84IGEE112 pKa = 4.06FRR114 pKa = 11.84QEE116 pKa = 4.36DD117 pKa = 3.99MVEE120 pKa = 4.21TIDD123 pKa = 3.54MLMMHH128 pKa = 7.23EE129 pKa = 4.74ASVIDD134 pKa = 3.78IRR136 pKa = 11.84IADD139 pKa = 4.26EE140 pKa = 4.45YY141 pKa = 11.36DD142 pKa = 3.12VCTNVCVV149 pKa = 3.48

Molecular weight: 17.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q7T476|Q7T476_9VIRU C1 protein OS=Chili leaf curl betasatellite OX=2010286 GN=C1 PE=4 SV=1
MM1 pKa = 6.76HH2 pKa = 7.23HH3 pKa = 7.02VYY5 pKa = 9.97EE6 pKa = 4.63LCPYY10 pKa = 8.2IQIYY14 pKa = 8.7GHH16 pKa = 5.39YY17 pKa = 10.14LRR19 pKa = 11.84RR20 pKa = 11.84QDD22 pKa = 3.06SCIVHH27 pKa = 7.65IYY29 pKa = 8.71MQMTIKK35 pKa = 10.68YY36 pKa = 8.48NNEE39 pKa = 3.25KK40 pKa = 10.51GMEE43 pKa = 3.71FRR45 pKa = 11.84IDD47 pKa = 3.45VKK49 pKa = 10.89INEE52 pKa = 4.55DD53 pKa = 3.28NSILVLVEE61 pKa = 4.17LCSTRR66 pKa = 11.84SPALAKK72 pKa = 9.01KK73 pKa = 8.95TFMIPYY79 pKa = 8.61GHH81 pKa = 7.44DD82 pKa = 3.85GIIPPFDD89 pKa = 4.09FNILEE94 pKa = 4.18EE95 pKa = 4.99GIHH98 pKa = 6.55NILKK102 pKa = 10.38VMYY105 pKa = 8.74KK106 pKa = 10.17DD107 pKa = 3.43SRR109 pKa = 11.84IGEE112 pKa = 4.06FRR114 pKa = 11.84QEE116 pKa = 4.36DD117 pKa = 3.99MVEE120 pKa = 4.21TIDD123 pKa = 3.54MLMMHH128 pKa = 7.23EE129 pKa = 4.74ASVIDD134 pKa = 3.78IRR136 pKa = 11.84IADD139 pKa = 4.26EE140 pKa = 4.45YY141 pKa = 11.36DD142 pKa = 3.12VCTNVCVV149 pKa = 3.48

Molecular weight: 17.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

149

149

149

149.0

17.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.685 ± 0.0

3.356 ± 0.0

7.383 ± 0.0

8.054 ± 0.0

3.356 ± 0.0

4.027 ± 0.0

4.698 ± 0.0

12.752 ± 0.0

4.698 ± 0.0

6.04 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

6.711 ± 0.0

4.698 ± 0.0

3.356 ± 0.0

2.685 ± 0.0

4.698 ± 0.0

4.027 ± 0.0

3.356 ± 0.0

7.383 ± 0.0

0.0 ± 0.0

6.04 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski