Arachis duranensis (Wild peanut)

Taxonomy: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae;

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 44786 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6P5NAA3|A0A6P5NAA3_ARADU protein FAM133 isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107477545 PE=4 SV=1
MM1 pKa = 7.77DD2 pKa = 3.54VKK4 pKa = 11.08GNNVTPDD11 pKa = 3.76FSSYY15 pKa = 11.15ILFEE19 pKa = 4.3ASGDD23 pKa = 3.92SEE25 pKa = 4.75EE26 pKa = 6.19ADD28 pKa = 3.27FDD30 pKa = 4.55HH31 pKa = 6.94NKK33 pKa = 8.6MVCEE37 pKa = 4.39ISRR40 pKa = 11.84VGSYY44 pKa = 7.33VHH46 pKa = 6.96HH47 pKa = 6.22GHH49 pKa = 6.84EE50 pKa = 5.63DD51 pKa = 3.52YY52 pKa = 11.55DD53 pKa = 5.52DD54 pKa = 6.14DD55 pKa = 7.24DD56 pKa = 5.42DD57 pKa = 6.0ALSCSYY63 pKa = 10.96DD64 pKa = 3.59RR65 pKa = 11.84SDD67 pKa = 5.13YY68 pKa = 11.59DD69 pKa = 5.26DD70 pKa = 4.85DD71 pKa = 4.18ACNVAEE77 pKa = 4.81VNWDD81 pKa = 4.18DD82 pKa = 6.48DD83 pKa = 5.97DD84 pKa = 7.68DD85 pKa = 7.44DD86 pKa = 7.49DD87 pKa = 7.49DD88 pKa = 6.86DD89 pKa = 5.28GEE91 pKa = 4.38KK92 pKa = 10.43KK93 pKa = 10.59DD94 pKa = 3.84VVFGTSYY101 pKa = 10.97CDD103 pKa = 3.56EE104 pKa = 4.45EE105 pKa = 6.15DD106 pKa = 3.67EE107 pKa = 4.75VLQEE111 pKa = 3.83QHH113 pKa = 5.93PTRR116 pKa = 11.84SFVSFASNQEE126 pKa = 4.17SLDD129 pKa = 3.6EE130 pKa = 4.11MEE132 pKa = 4.68KK133 pKa = 10.72NRR135 pKa = 11.84LFWEE139 pKa = 4.55ACLASS144 pKa = 3.65

Molecular weight: 16.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6P4BCF6|A0A6P4BCF6_ARADU uncharacterized protein LOC107461533 OS=Arachis duranensis OX=130453 GN=LOC107461533 PE=4 SV=1
MM1 pKa = 7.29AAWVSNYY8 pKa = 9.79NPSATRR14 pKa = 11.84TLSVARR20 pKa = 11.84PPPPSSPSLLPLPSTTTQPPPTPPGRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84PPRR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84HH55 pKa = 5.6LPPLSSSLLSSSFFFPPSSATAHH78 pKa = 5.75LRR80 pKa = 11.84ATARR84 pKa = 11.84RR85 pKa = 11.84RR86 pKa = 11.84HH87 pKa = 6.05RR88 pKa = 11.84PTATPLQPATPPLPLPPATSLPHH111 pKa = 6.45SPPPPTRR118 pKa = 11.84FRR120 pKa = 11.84NTQTLLSVRR129 pKa = 11.84SFSS132 pKa = 3.68

Molecular weight: 14.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

34312

10474

44786

19145231

37

5423

427.5

47.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.506 ± 0.011

1.932 ± 0.005

5.353 ± 0.007

6.483 ± 0.012

4.223 ± 0.007

6.203 ± 0.011

2.572 ± 0.005

5.434 ± 0.009

6.256 ± 0.012

9.686 ± 0.015

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.456 ± 0.005

4.72 ± 0.008

4.823 ± 0.01

3.769 ± 0.008

5.279 ± 0.009

8.803 ± 0.012

4.889 ± 0.006

6.427 ± 0.007

1.298 ± 0.004

2.875 ± 0.006
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski