Tobacco leaf curl disease associated sequence

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; Tobacco leaf curl betasatellite

Average proteome isoelectric point is 4.79

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q7T3Z7|Q7T3Z7_9VIRU Putative C1 protein OS=Tobacco leaf curl disease associated sequence OX=169691 GN=C1 PE=4 SV=1
MM1 pKa = 7.4TYY3 pKa = 9.91EE4 pKa = 4.33HH5 pKa = 6.63SHH7 pKa = 4.51NTMTIKK13 pKa = 10.72YY14 pKa = 8.52KK15 pKa = 9.19NQKK18 pKa = 9.54GMEE21 pKa = 4.43FIIDD25 pKa = 3.52VRR27 pKa = 11.84LKK29 pKa = 9.83EE30 pKa = 4.38DD31 pKa = 3.2NSILVQIQLFSTGSPALATRR51 pKa = 11.84KK52 pKa = 9.8FMIPYY57 pKa = 8.08GHH59 pKa = 6.53SGIIPPFNFNTLEE72 pKa = 3.96QGIHH76 pKa = 5.74NMLALMYY83 pKa = 9.57KK84 pKa = 9.74EE85 pKa = 4.56SNIGEE90 pKa = 4.57FKK92 pKa = 10.79QEE94 pKa = 4.58DD95 pKa = 4.04MVEE98 pKa = 4.39CIDD101 pKa = 3.66MLMMEE106 pKa = 5.27EE107 pKa = 4.94APVIDD112 pKa = 4.34INVMDD117 pKa = 5.27AYY119 pKa = 10.57DD120 pKa = 4.0VYY122 pKa = 10.56THH124 pKa = 6.81SSVV127 pKa = 3.05

Molecular weight: 14.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q7T3Z7|Q7T3Z7_9VIRU Putative C1 protein OS=Tobacco leaf curl disease associated sequence OX=169691 GN=C1 PE=4 SV=1
MM1 pKa = 7.4TYY3 pKa = 9.91EE4 pKa = 4.33HH5 pKa = 6.63SHH7 pKa = 4.51NTMTIKK13 pKa = 10.72YY14 pKa = 8.52KK15 pKa = 9.19NQKK18 pKa = 9.54GMEE21 pKa = 4.43FIIDD25 pKa = 3.52VRR27 pKa = 11.84LKK29 pKa = 9.83EE30 pKa = 4.38DD31 pKa = 3.2NSILVQIQLFSTGSPALATRR51 pKa = 11.84KK52 pKa = 9.8FMIPYY57 pKa = 8.08GHH59 pKa = 6.53SGIIPPFNFNTLEE72 pKa = 3.96QGIHH76 pKa = 5.74NMLALMYY83 pKa = 9.57KK84 pKa = 9.74EE85 pKa = 4.56SNIGEE90 pKa = 4.57FKK92 pKa = 10.79QEE94 pKa = 4.58DD95 pKa = 4.04MVEE98 pKa = 4.39CIDD101 pKa = 3.66MLMMEE106 pKa = 5.27EE107 pKa = 4.94APVIDD112 pKa = 4.34INVMDD117 pKa = 5.27AYY119 pKa = 10.57DD120 pKa = 4.0VYY122 pKa = 10.56THH124 pKa = 6.81SSVV127 pKa = 3.05

Molecular weight: 14.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

127

127

127

127.0

14.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.937 ± 0.0

0.787 ± 0.0

5.512 ± 0.0

7.874 ± 0.0

4.724 ± 0.0

4.724 ± 0.0

3.937 ± 0.0

10.236 ± 0.0

5.512 ± 0.0

6.299 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

8.661 ± 0.0

6.299 ± 0.0

3.937 ± 0.0

3.937 ± 0.0

1.575 ± 0.0

6.299 ± 0.0

5.512 ± 0.0

5.512 ± 0.0

0.0 ± 0.0

4.724 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski